Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3343 ATGTCGACACTAAACCAAAGCAGTTCCCTCAACAGTTGCACCAAGTTCCCCCTCCCACCCCATGACCAAATGACCACCACCCACAACCATGTAGTAGATGAAACCCAATCCCAGCCCTTTGACTACTCCAAACGCGCCCAATGGCTACGCGCCGCCGTCCTCGGTGCCAACGACGGCCTCGTCTCCACAGCCTCTCTCATGATGGGCATCGGCGCTGTCAAGCACGACGTCAAGGCCATGATCCTCACTGGCTTTGCTGGCCTCGTCGCCGGTGCCTGCAGCATGGCCATAGGTGAGTTCGTCTCTGTCTACTCTCAGTTGGATATAGAAATGGCCCAGATAAAAAGAAACAAAGATCTGATAAAGGACTTGGAGGAGGAGGAGGACGAGAGAGAGAATCTACCGAACCCTCTTCAGGCTGCGGTAGCTTCGGCGTTGGCCTTTTCCATGGGGGCAATGGTGCCACTGCTGGCGGCAGCGTTCATAAAAGAGTATAGGGTTCGGCTCGGAGTGGTCGTGGCGGCAGTGACCATGGCACTGGTGGGGTTCGGGTGGCTAGGGGCGGCGTTGGGGAAGGCACCAATAGTAAGGTCCGCGGTGAGGGTTTTGATCGGAGGGTGGATGGCCATGGCTGTGACTTTTGGATTGACTAAGTTGATTGGGTCGAGTGGACTGTGA 678 56.19 MSTLNQSSSLNSCTKFPLPPHDQMTTTHNHVVDETQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKHDVKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKRNKDLIKDLEEEEDERENLPNPLQAAVASALAFSMGAMVPLLAAAFIKEYRVRLGVVVAAVTMALVGFGWLGAALGKAPIVRSAVRVLIGGWMAMAVTFGLTKLIGSSGL 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 91316980 91318198 - Tan0011070.1 Tan01g3343 740767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3343 225 Coils Coil 107 134 - -
Tan01g3343 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 222 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
Tan01g3343 225 Pfam VIT family 129 217 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Tan01g3343 225 Pfam VIT family 49 129 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3343 Tan-Chr1:91316980 Tan11g1146 Tan-Chr11:9052411 3.50E-75 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3343 K22736 - csv:101210510 358.607