Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3399 ATGTCCGATCATGACCCCTCCCCCTCCGCCGCCAAGCTTCGCAAGATCCCCCCTATCCCCATTCGCCGCGATTCCAAACCCAACGCCGGAGACGACTCTGATTCCGATCAAGAACATGACCTCTATAACCACGCCGAGGATCGCCCTTATCATTCTGAAGATTCCTCCATCATCATGGCCTCGTCTCTCGGCTTGAACCATATTCGGACACGGTCTGCTCCTATGCCGCTACGGACCTCTGCCGTTGGCACGCCCTCCAATTTGGGTGACAATGCCAGGAACAATGTCGCCGCCGTGACCGACTCCGACCCAAAACCTTCCTCCACTGAACAAGGGAAAAAATTTTTGTGGAGTCAATCGAAATCGTTGAGATATCCGTCGGCTCTGAATCATGATTTTGAGGGTAATCATGTAGCGTTTGCTAAGGAAATTCAGTCTCCACGATTCCGTGCAATACTGCGTGTTACTAGTGGAAGAAGAAAGAGGACCCCCGATATCAAAAGCTTCTCTCACGAGCTCAATTCCAAAGGTGTTCGGCCTTTTCCAGTTTGGAAGCCTAGGGCATTTGGACATTTGGAAGAGATCATGGTGGCTATCAGAGCAAAATTTGACAGATTGAAGGATGATGTTAATTACGAACTGGGCATTTTTGCTGGCGATCTCGTGGATATACTTGAAAAGACAGACCGGTCTCAACCTGAACTTAAAGAGGGTTTGGAGGATTTGTTGGTGGTTGCTCGGAAATGTGCGACAATGTCACCTACTGAATTCTGGGCGAAAGGTGAAGGGATTGTCCAAAGTCTAGACGACCGGCGCCAGGAGCTGTCATTAGGGATTCTTAAGCAAGCCCATACTCGCCTTCTTTTCATCTTGACACGATGTACTCGGCTTATTCAGTTCAGAAAGGAGAGTGGCTATGAAGATGACCACATTTTGGGTCTTCACCAACTTAGTGATCTAGGAATTTATCCAGAGAAAATTAGGCAGCTCCACCAGCATGACTTTGGGGATCTATTGTCTGGGAAAGAAGATGTTGAGCAGCAGCTGAAATTGGTTGGGAAGGATCAAGCCAGTCGCATAGTGAAGCAAGATTTAGATCAAAGTTTTAGTACTAGTGCTGGAAATGTTGATCTGGACTCTACCATAAGTATTGAGTCTTCTACAAGCATGTATAGGATGGCATCCTGGAAAAAGCTACCATCGGCAGCTGAGAAGAACCGGAAAGACAATGACTCTATTGGTACGCCTGCTAAGGATAAACTGGAACTGTTGCATGTACATGAAGCTAAAACTGGGAGCAACAACCAATTAGATACCCCATCTAGTAATATTGAGCATTCAGAAGCACCACCTAAAGAACAAAAATTATCTTGGGGAATATGGGGTTATCATCAAAATGCCACTTTTGAGAATTTGATGATTTGTCGGATTTGTGAGGTTGAAATTCCAACTATTCATGTTGAGGAGCATTCTCGAATATGTACAATTGCTGATAGGTGTGATTTGAAAGGTCTAACTGTGAACGAGCGCCTTGAACGGGTTGCTACAGCTCTTGAAAAGATACTAGATTCTTGGACGCCTAAAAGTACACCAAGAAGTTGCGATACATCCTGTGGAAATTTTGATACCGTTAAGGTTTGTACATCAAGTATGCAAGAAGAGTTTTTTGAGGTGTCATCTAAAGGAATCAGTTTGTCATGTCGAAACACTGAAGATCTGCTTGATTCCCTCCCTGTTACTAGCAACTCTTCCTTCATGGAAAGCCAGGATATTTTTCCTGATCCATCATACAATCGACCATTTATTTTCACCCCAGATCACAGTACAAAATCAACGTCAGCTGGAACCCTAACACCAAGATCACCTCTTTTAACACCCAGATCCAGCCAGATTGAATTGTTGTTGCATGGGCGAAGAGCAATATCTGAACTTGAAAATTATCAGCAGATATACAAATTATTGGATATTGTTCGTTCCATTGCAAACATTAACAATTCTGACTATGGTGCATTGGAGTCCATGCTTGATCGGCTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTTGATGCCCTTGTTGTGGAGACCTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAAATGGCATGGTTGATGAAGAGAGTTCAGTGGAAGATGATATTGTTCGTAGTTTGCGTGCAAGTCCTGTTAACCCATGTTCAAAAGATCGAACATCTATTGAAGATTTTGAAATAATTAAACCAATTAGTAGAGGGGCATATGGCCGAGTTTTCCTTGCCAGAAAAAGAGCCACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGTAATATCCTTATCTCGGTTCGCAACCCATTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTGGTCATGGAATACTTAAATGGTGGCGATATTTATTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGTATTTATATCGCTGAAATTGTTCTTGCTTTGGAGTATTTGCACTCCTTAAATGTGATTCACAGAGATTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTGACAGATTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAATCAGTGGAACTGCTTCACTTGGAGACAATGGACCAACATCTCAATCTTCGTCAAAAAAAGATTACAGACAAAAGCATTCAGTTGTTGGCACTCCGGATTATTTGGCCCCTGAGATACTTCTGGGCATGGGACATGGTGTAACTGCGGATTGGTGGTCTGTTGGAGTAATTCTTTTTGAGATGCTTGTAGGGCTACCGCCGTTCAATGCAGAAAGTCCACAGCAAATTTTTGATAATATTATCAATAGAGACATACCATGGCCCAAGGTACCAGATGAGATGAGTTATGAAGCCCAAGATTTGATTGACAAATTGTTGACTGAAAATTCAGTTCAAAGACTGGGAGCTACGGGAGCCAGAGAGGTGAAGCAGCATCCTTTCTTTAAAGATATTAGCTGGGAAACACTTGCAAGGCAGAAGGCAATGTTTATACCATCAGCAGAGCCGCAGGATACAAGTTATTTCATGAGCCGTTATATATGGAATCCAGTAGATGAGGATTTTAATGGTGGAAGTGACTTTGATGATCATGATTTGACTGATACTTGCAGCAGTAGTTCATTTAGCAACCTACAAGATGAAGATGGAGACGAATGCGGTAGTTTGGCTGACTTCTGTGCATCAGCCCTTTCTGTGAAGTACTCGTTCAGCAATTTCTCTTTCAAGAACTTATCACAGCTGGCTTCCATCAATTATGATTTGGTTGTGAAGAGCAGTCAAAACTCACCAGATGTATCCAAACCATCCATTCCTTGA 3519 42.68 MSDHDPSPSAAKLRKIPPIPIRRDSKPNAGDDSDSDQEHDLYNHAEDRPYHSEDSSIIMASSLGLNHIRTRSAPMPLRTSAVGTPSNLGDNARNNVAAVTDSDPKPSSTEQGKKFLWSQSKSLRYPSALNHDFEGNHVAFAKEIQSPRFRAILRVTSGRRKRTPDIKSFSHELNSKGVRPFPVWKPRAFGHLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDILEKTDRSQPELKEGLEDLLVVARKCATMSPTEFWAKGEGIVQSLDDRRQELSLGILKQAHTRLLFILTRCTRLIQFRKESGYEDDHILGLHQLSDLGIYPEKIRQLHQHDFGDLLSGKEDVEQQLKLVGKDQASRIVKQDLDQSFSTSAGNVDLDSTISIESSTSMYRMASWKKLPSAAEKNRKDNDSIGTPAKDKLELLHVHEAKTGSNNQLDTPSSNIEHSEAPPKEQKLSWGIWGYHQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLERVATALEKILDSWTPKSTPRSCDTSCGNFDTVKVCTSSMQEEFFEVSSKGISLSCRNTEDLLDSLPVTSNSSFMESQDIFPDPSYNRPFIFTPDHSTKSTSAGTLTPRSPLLTPRSSQIELLLHGRRAISELENYQQIYKLLDIVRSIANINNSDYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSNGMVDEESSVEDDIVRSLRASPVNPCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSISGTASLGDNGPTSQSSSKKDYRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQQIFDNIINRDIPWPKVPDEMSYEAQDLIDKLLTENSVQRLGATGAREVKQHPFFKDISWETLARQKAMFIPSAEPQDTSYFMSRYIWNPVDEDFNGGSDFDDHDLTDTCSSSSFSNLQDEDGDECGSLADFCASALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPSIP 1172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 96673642 96689108 - Tan0020902.1 Tan01g3399 740823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3399 1172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g3399 1172 FunFam probable serine/threonine protein kinase IREH1 759 848 - -
Tan01g3399 1172 MobiDBLite consensus disorder prediction 922 939 - -
Tan01g3399 1172 MobiDBLite consensus disorder prediction 430 451 - -
Tan01g3399 1172 PANTHER SERINE/THREONINE-PROTEIN KINASE 469 1144 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Tan01g3399 1172 CDD STKc_MAST_like 767 1054 - -
Tan01g3399 1172 MobiDBLite consensus disorder prediction 17 52 - -
Tan01g3399 1172 SUPERFAMILY Protein kinase-like (PK-like) 758 1079 IPR011009 -
Tan01g3399 1172 MobiDBLite consensus disorder prediction 922 946 - -
Tan01g3399 1172 Gene3D Phosphorylase Kinase; domain 1 759 1076 - -
Tan01g3399 1172 MobiDBLite consensus disorder prediction 430 447 - -
Tan01g3399 1172 ProSiteProfiles Protein kinase domain profile. 761 1049 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g3399 1172 ProSiteProfiles AGC-kinase C-terminal domain profile. 1050 1152 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g3399 1172 SMART serkin_6 761 1049 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g3399 1172 Pfam Protein kinase domain 762 1049 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g3399 1172 Gene3D Transferase(Phosphotransferase) domain 1 845 1067 - -
Tan01g3399 1172 MobiDBLite consensus disorder prediction 1 52 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3399 Tan-Chr1:96673642 Tan05g3392 Tan-Chr5:85982695 3.20E-305 dispersed
Tan10g0942 Tan-Chr10:8201002 Tan01g3399 Tan-Chr1:96673642 8.90E-33 dispersed
Tan01g3399 Tan-Chr1:96673642 Tan01g4598 Tan-Chr1:112003969 1.20E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67079 PF00069 Pkinase 2.90E-64 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3399 K08789 - csv:101210442 2054.64