Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3399 | ATGTCCGATCATGACCCCTCCCCCTCCGCCGCCAAGCTTCGCAAGATCCCCCCTATCCCCATTCGCCGCGATTCCAAACCCAACGCCGGAGACGACTCTGATTCCGATCAAGAACATGACCTCTATAACCACGCCGAGGATCGCCCTTATCATTCTGAAGATTCCTCCATCATCATGGCCTCGTCTCTCGGCTTGAACCATATTCGGACACGGTCTGCTCCTATGCCGCTACGGACCTCTGCCGTTGGCACGCCCTCCAATTTGGGTGACAATGCCAGGAACAATGTCGCCGCCGTGACCGACTCCGACCCAAAACCTTCCTCCACTGAACAAGGGAAAAAATTTTTGTGGAGTCAATCGAAATCGTTGAGATATCCGTCGGCTCTGAATCATGATTTTGAGGGTAATCATGTAGCGTTTGCTAAGGAAATTCAGTCTCCACGATTCCGTGCAATACTGCGTGTTACTAGTGGAAGAAGAAAGAGGACCCCCGATATCAAAAGCTTCTCTCACGAGCTCAATTCCAAAGGTGTTCGGCCTTTTCCAGTTTGGAAGCCTAGGGCATTTGGACATTTGGAAGAGATCATGGTGGCTATCAGAGCAAAATTTGACAGATTGAAGGATGATGTTAATTACGAACTGGGCATTTTTGCTGGCGATCTCGTGGATATACTTGAAAAGACAGACCGGTCTCAACCTGAACTTAAAGAGGGTTTGGAGGATTTGTTGGTGGTTGCTCGGAAATGTGCGACAATGTCACCTACTGAATTCTGGGCGAAAGGTGAAGGGATTGTCCAAAGTCTAGACGACCGGCGCCAGGAGCTGTCATTAGGGATTCTTAAGCAAGCCCATACTCGCCTTCTTTTCATCTTGACACGATGTACTCGGCTTATTCAGTTCAGAAAGGAGAGTGGCTATGAAGATGACCACATTTTGGGTCTTCACCAACTTAGTGATCTAGGAATTTATCCAGAGAAAATTAGGCAGCTCCACCAGCATGACTTTGGGGATCTATTGTCTGGGAAAGAAGATGTTGAGCAGCAGCTGAAATTGGTTGGGAAGGATCAAGCCAGTCGCATAGTGAAGCAAGATTTAGATCAAAGTTTTAGTACTAGTGCTGGAAATGTTGATCTGGACTCTACCATAAGTATTGAGTCTTCTACAAGCATGTATAGGATGGCATCCTGGAAAAAGCTACCATCGGCAGCTGAGAAGAACCGGAAAGACAATGACTCTATTGGTACGCCTGCTAAGGATAAACTGGAACTGTTGCATGTACATGAAGCTAAAACTGGGAGCAACAACCAATTAGATACCCCATCTAGTAATATTGAGCATTCAGAAGCACCACCTAAAGAACAAAAATTATCTTGGGGAATATGGGGTTATCATCAAAATGCCACTTTTGAGAATTTGATGATTTGTCGGATTTGTGAGGTTGAAATTCCAACTATTCATGTTGAGGAGCATTCTCGAATATGTACAATTGCTGATAGGTGTGATTTGAAAGGTCTAACTGTGAACGAGCGCCTTGAACGGGTTGCTACAGCTCTTGAAAAGATACTAGATTCTTGGACGCCTAAAAGTACACCAAGAAGTTGCGATACATCCTGTGGAAATTTTGATACCGTTAAGGTTTGTACATCAAGTATGCAAGAAGAGTTTTTTGAGGTGTCATCTAAAGGAATCAGTTTGTCATGTCGAAACACTGAAGATCTGCTTGATTCCCTCCCTGTTACTAGCAACTCTTCCTTCATGGAAAGCCAGGATATTTTTCCTGATCCATCATACAATCGACCATTTATTTTCACCCCAGATCACAGTACAAAATCAACGTCAGCTGGAACCCTAACACCAAGATCACCTCTTTTAACACCCAGATCCAGCCAGATTGAATTGTTGTTGCATGGGCGAAGAGCAATATCTGAACTTGAAAATTATCAGCAGATATACAAATTATTGGATATTGTTCGTTCCATTGCAAACATTAACAATTCTGACTATGGTGCATTGGAGTCCATGCTTGATCGGCTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTTGATGCCCTTGTTGTGGAGACCTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAAATGGCATGGTTGATGAAGAGAGTTCAGTGGAAGATGATATTGTTCGTAGTTTGCGTGCAAGTCCTGTTAACCCATGTTCAAAAGATCGAACATCTATTGAAGATTTTGAAATAATTAAACCAATTAGTAGAGGGGCATATGGCCGAGTTTTCCTTGCCAGAAAAAGAGCCACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGTAATATCCTTATCTCGGTTCGCAACCCATTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTGGTCATGGAATACTTAAATGGTGGCGATATTTATTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGTATTTATATCGCTGAAATTGTTCTTGCTTTGGAGTATTTGCACTCCTTAAATGTGATTCACAGAGATTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTGACAGATTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAATCAGTGGAACTGCTTCACTTGGAGACAATGGACCAACATCTCAATCTTCGTCAAAAAAAGATTACAGACAAAAGCATTCAGTTGTTGGCACTCCGGATTATTTGGCCCCTGAGATACTTCTGGGCATGGGACATGGTGTAACTGCGGATTGGTGGTCTGTTGGAGTAATTCTTTTTGAGATGCTTGTAGGGCTACCGCCGTTCAATGCAGAAAGTCCACAGCAAATTTTTGATAATATTATCAATAGAGACATACCATGGCCCAAGGTACCAGATGAGATGAGTTATGAAGCCCAAGATTTGATTGACAAATTGTTGACTGAAAATTCAGTTCAAAGACTGGGAGCTACGGGAGCCAGAGAGGTGAAGCAGCATCCTTTCTTTAAAGATATTAGCTGGGAAACACTTGCAAGGCAGAAGGCAATGTTTATACCATCAGCAGAGCCGCAGGATACAAGTTATTTCATGAGCCGTTATATATGGAATCCAGTAGATGAGGATTTTAATGGTGGAAGTGACTTTGATGATCATGATTTGACTGATACTTGCAGCAGTAGTTCATTTAGCAACCTACAAGATGAAGATGGAGACGAATGCGGTAGTTTGGCTGACTTCTGTGCATCAGCCCTTTCTGTGAAGTACTCGTTCAGCAATTTCTCTTTCAAGAACTTATCACAGCTGGCTTCCATCAATTATGATTTGGTTGTGAAGAGCAGTCAAAACTCACCAGATGTATCCAAACCATCCATTCCTTGA | 3519 | 42.68 | MSDHDPSPSAAKLRKIPPIPIRRDSKPNAGDDSDSDQEHDLYNHAEDRPYHSEDSSIIMASSLGLNHIRTRSAPMPLRTSAVGTPSNLGDNARNNVAAVTDSDPKPSSTEQGKKFLWSQSKSLRYPSALNHDFEGNHVAFAKEIQSPRFRAILRVTSGRRKRTPDIKSFSHELNSKGVRPFPVWKPRAFGHLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDILEKTDRSQPELKEGLEDLLVVARKCATMSPTEFWAKGEGIVQSLDDRRQELSLGILKQAHTRLLFILTRCTRLIQFRKESGYEDDHILGLHQLSDLGIYPEKIRQLHQHDFGDLLSGKEDVEQQLKLVGKDQASRIVKQDLDQSFSTSAGNVDLDSTISIESSTSMYRMASWKKLPSAAEKNRKDNDSIGTPAKDKLELLHVHEAKTGSNNQLDTPSSNIEHSEAPPKEQKLSWGIWGYHQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLERVATALEKILDSWTPKSTPRSCDTSCGNFDTVKVCTSSMQEEFFEVSSKGISLSCRNTEDLLDSLPVTSNSSFMESQDIFPDPSYNRPFIFTPDHSTKSTSAGTLTPRSPLLTPRSSQIELLLHGRRAISELENYQQIYKLLDIVRSIANINNSDYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSNGMVDEESSVEDDIVRSLRASPVNPCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSISGTASLGDNGPTSQSSSKKDYRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQQIFDNIINRDIPWPKVPDEMSYEAQDLIDKLLTENSVQRLGATGAREVKQHPFFKDISWETLARQKAMFIPSAEPQDTSYFMSRYIWNPVDEDFNGGSDFDDHDLTDTCSSSSFSNLQDEDGDECGSLADFCASALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPSIP | 1172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 96673642 | 96689108 | - | Tan0020902.1 | Tan01g3399 | 740823 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3399 | 1172 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 880 | 892 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g3399 | 1172 | FunFam | probable serine/threonine protein kinase IREH1 | 759 | 848 | - | - | |
Tan01g3399 | 1172 | MobiDBLite | consensus disorder prediction | 922 | 939 | - | - | |
Tan01g3399 | 1172 | MobiDBLite | consensus disorder prediction | 430 | 451 | - | - | |
Tan01g3399 | 1172 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 469 | 1144 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Tan01g3399 | 1172 | CDD | STKc_MAST_like | 767 | 1054 | - | - | |
Tan01g3399 | 1172 | MobiDBLite | consensus disorder prediction | 17 | 52 | - | - | |
Tan01g3399 | 1172 | SUPERFAMILY | Protein kinase-like (PK-like) | 758 | 1079 | IPR011009 | - | |
Tan01g3399 | 1172 | MobiDBLite | consensus disorder prediction | 922 | 946 | - | - | |
Tan01g3399 | 1172 | Gene3D | Phosphorylase Kinase; domain 1 | 759 | 1076 | - | - | |
Tan01g3399 | 1172 | MobiDBLite | consensus disorder prediction | 430 | 447 | - | - | |
Tan01g3399 | 1172 | ProSiteProfiles | Protein kinase domain profile. | 761 | 1049 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g3399 | 1172 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 1050 | 1152 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g3399 | 1172 | SMART | serkin_6 | 761 | 1049 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g3399 | 1172 | Pfam | Protein kinase domain | 762 | 1049 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g3399 | 1172 | Gene3D | Transferase(Phosphotransferase) domain 1 | 845 | 1067 | - | - | |
Tan01g3399 | 1172 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3399 | Tan-Chr1:96673642 | Tan05g3392 | Tan-Chr5:85982695 | 3.20E-305 | dispersed | |
Tan10g0942 | Tan-Chr10:8201002 | Tan01g3399 | Tan-Chr1:96673642 | 8.90E-33 | dispersed | |
Tan01g3399 | Tan-Chr1:96673642 | Tan01g4598 | Tan-Chr1:112003969 | 1.20E-67 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67079 | PF00069 | Pkinase | 2.90E-64 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3399 | K08789 | - | csv:101210442 | 2054.64 |