Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3423 ATGGAGGAAACTTTTTTCGATAGGATAGGTAACAAGGCTGCCTTCTTTGCTGGAGCAGATTTTACACTTCACGTGATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAGTCATGTCATTTTCTCAACAAGGATGTCGGGCAATTTGTATACTCTCTGCTAATGGTATGGTTTCAAATGTTACACTTCGACAGTCAACATCTTCTGGGGGTACTTTAACATATGAGGGTCGATTTGAGATACTTTCATTGTCTGGATCGTATATGCCTTCTGAGATTGGTGGAACAAAGAGCCGATCTGGAGGGATGAGTGTCCCTTTGGCTGGCCCAGATGGCCGAGTGATGGGTGGAGGACTTGCCGGCATGCTGATCGCAGCTGGTCCAGTGCAGGTGGTGGTGGGCAGTTTCTTACCACCAGGTCTCCAGGACGAAAATAAACCAAAGAAGAGTAGGATGGAACCTACATCAAATGCAATTTCACCTCCAGCCATGAAGCCCATAGTCACATCCACTCTGATAGGAGATAAACTTATTGCTTCTTTAGACCCAACTCCAGCTTTTAGAATTCCACCAGTCAATGAAAAATCACCTTTTCCAGATGAATCAAGAGGTGTCTTCCACCATTCAAACCATGAGGTTTCTTGTTGA 648 44.29 MEETFFDRIGNKAAFFAGADFTLHVITVNIGEDVNLKVMSFSQQGCRAICILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVPLAGPDGRVMGGGLAGMLIAAGPVQVVVGSFLPPGLQDENKPKKSRMEPTSNAISPPAMKPIVTSTLIGDKLIASLDPTPAFRIPPVNEKSPFPDESRGVFHHSNHEVSC 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 98251196 98255252 - Tan0022042.1 Tan01g3423 740847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3423 215 MobiDBLite consensus disorder prediction 200 215 - -
Tan01g3423 215 ProSiteProfiles PPC domain profile profile. 18 157 IPR005175 -
Tan01g3423 215 Gene3D - 22 153 - -
Tan01g3423 215 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 16 156 IPR039605 GO:0003680(InterPro)
Tan01g3423 215 Pfam Plants and Prokaryotes Conserved (PCC) domain 23 136 IPR005175 -
Tan01g3423 215 MobiDBLite consensus disorder prediction 184 215 - -
Tan01g3423 215 SUPERFAMILY AF0104/ALDC/Ptd012-like 20 148 - -
Tan01g3423 215 MobiDBLite consensus disorder prediction 140 163 - -
Tan01g3423 215 FunFam AT-hook motif nuclear-localized protein 1-like 23 154 - -
Tan01g3423 215 CDD DUF296 22 136 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3423 Tan-Chr1:98251196 Tan01g3427 Tan-Chr1:98340217 1.30E-60 dispersed
Tan01g3423 Tan-Chr1:98251196 Tan01g3426 Tan-Chr1:98340217 1.50E-107 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3423 - - - 0.0