Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3426 | ATGGAGGAGACAGAGGGAGTTGATTTTGGGTTTGCTGTAAAAGTGAGCCAAGCTCCAGAGAGCTTCGGGATGATGGATTCGAGACCTGAAAATACAACAGATAGCGAGCCGGCGGAGGCGGCCACAGCGGAAGTGGGTCTGACGCCGGCGGCGGCTACAAATGGAAAGAAGAAAAGAGGGAGGCCGAGAAAGTACGGACCCGATGGGACTGTAGCGCCAACATTGTCGCCAATGCCGATTTCATCGTCAATTCCGCTGACCGGAGAGTTTCCCGGTTGGAAACGGGGAAGAGGGCGATCAGTAGAGTCGATTAAGAAGTCGCGGAAGTTCGAATATGAGATTCCAGGTAACAAGGTTGCCTTCTTTGCTGGAGCAGATTTTACACCTCACGTGATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAGTCATGTCATTTTCTCAACAAGGATGTCGGGCAATTTGTATACTCTCTGCTAATGGTATGGTTTCAAATGTTACACTTCGACAGTCAACATCTTCTGGGGGTACTCTAACATATGAGGGTCGATTTGAGATACTTTCATTGTCTGGATCGTATATGCCTTCTGAGATTGGTGGAACAAAAAGCCGATCTGGAGGGATGAGTGTCTCTTTGGCTGGCCCAGATGGCCGAGTGATGGGTGGAGGACTTGCTGGCATGCTGATCGCAGCTGGTCCAGTGCAGGTGGTGGTGGGCAGTTTCTTACCACCAGGTCTCCAGGAGGAAAATAAACCAAAGAAGAGTAGGATGGAACCTACATCAAATGCAGTTTCACCTCCAGCCATGAAGCCCATAGTCACATCCACTCTGATAGGAGATAAAGCAGCTTCTTTAGACCCAACTCCAGCTTTTAGAATTCCACCAGTCAATGAAAAATCACCTTTTCCAGATGAATCAAGAGGTGTCTTCCACCATTCAAACCATGAGGTTTCTTGTTGA | 963 | 48.08 | MEETEGVDFGFAVKVSQAPESFGMMDSRPENTTDSEPAEAATAEVGLTPAAATNGKKKRGRPRKYGPDGTVAPTLSPMPISSSIPLTGEFPGWKRGRGRSVESIKKSRKFEYEIPGNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGCRAICILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPVQVVVGSFLPPGLQEENKPKKSRMEPTSNAVSPPAMKPIVTSTLIGDKAASLDPTPAFRIPPVNEKSPFPDESRGVFHHSNHEVSC | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 98340217 | 98345793 | - | Tan0002038.1 | Tan01g3426 | 740850 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3426 | 320 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 126 | 255 | - | - | |
Tan01g3426 | 320 | MobiDBLite | consensus disorder prediction | 247 | 270 | - | - | |
Tan01g3426 | 320 | CDD | DUF296 | 128 | 242 | IPR005175 | - | |
Tan01g3426 | 320 | MobiDBLite | consensus disorder prediction | 305 | 320 | - | - | |
Tan01g3426 | 320 | MobiDBLite | consensus disorder prediction | 286 | 320 | - | - | |
Tan01g3426 | 320 | Gene3D | - | 129 | 259 | - | - | |
Tan01g3426 | 320 | ProSiteProfiles | PPC domain profile profile. | 124 | 263 | IPR005175 | - | |
Tan01g3426 | 320 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 30 | 265 | IPR039605 | GO:0003680(InterPro) | |
Tan01g3426 | 320 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 129 | 242 | IPR005175 | - | |
Tan01g3426 | 320 | MobiDBLite | consensus disorder prediction | 18 | 80 | - | - | |
Tan01g3426 | 320 | FunFam | AT-hook motif nuclear-localized protein 1-like | 129 | 260 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0351 | Tan-Chr1:3025882 | Tan01g3426 | Tan-Chr1:98340217 | 9.40E-83 | dispersed | |
Tan01g0352 | Tan-Chr1:3025882 | Tan01g3426 | Tan-Chr1:98340217 | 9.40E-83 | dispersed | |
Tan01g3426 | Tan-Chr1:98340217 | Tan07g1762 | Tan-Chr7:69191597 | 7.10E-74 | dispersed | |
Tan01g3423 | Tan-Chr1:98251196 | Tan01g3426 | Tan-Chr1:98340217 | 1.50E-107 | proximal | |
Tan01g3426 | Tan-Chr1:98340217 | Tan01g3427 | Tan-Chr1:98340217 | 4.80E-131 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3426 | - | - | - | 0.0 |