Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3427 ATGGAGGAGACAGAGGGAGTTGATTTTGGGTTTGCTGTAAAAGTGAGCCAAGCTCCAGAGAGCTTCGGGATGATGGATTCGAGACCTGAAAATACAACAGATAGCGAGCCGGCGGAGGCGGCCACAGCGGAAGTGGGTCTGACGCCGGCGGCGGCTACAAATGGAAAGAAGAAAAGAGGGAGGCCGAGAAAGTACGGACCCGATGGGACTGTAGCGCCAACATTGTCGCCAATGCCGATTTCATCGTCAATTCCGCTGACCGGAGAGTTTCCCGGTTGGAAACGGGGAAGAGGGCGATCAGTAGAGTCGATTAAGAAGTCGCGGAAGTTCGAATATGAGATTCCAGGTAACAAGGTTGCCTTCTTTGCTGGAGCAGATTTTACACCTCACGTGATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAGTCATGTCATTTTCTCAACAAGGATGTCGGGCAATTTGTATACTCTCTGCTAATGGTATGGTTTCAAATGTTACACTTCGACAGTCAACATCTTCTGGGGGTACTCTAACATATGAGGGTCGATTTGAGATACTTTCATTGTCTGGATCGTATATGCCTTCTGAGATTGGTGGAACAAAAAGCCGATCTGGAGGGATGAGTGTCTCTTTGGCTGGCCCAGATGGCCGAGTGATGGGTGGAGGACTTGCTGGCATGCTGATCGCAGCTGGTCCAGTGCAGGTATTATTTTCTCGAAATGAGTCAAATTATAAAGGCTTAAGGTCTGTCAGAGAGGCACAAATTCAGTAG 777 48.26 MEETEGVDFGFAVKVSQAPESFGMMDSRPENTTDSEPAEAATAEVGLTPAAATNGKKKRGRPRKYGPDGTVAPTLSPMPISSSIPLTGEFPGWKRGRGRSVESIKKSRKFEYEIPGNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGCRAICILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPVQVLFSRNESNYKGLRSVREAQIQ 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 98340217 98345793 - Tan0002038.2 Tan01g3427 740851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3427 258 CDD DUF296 128 237 IPR005175 -
Tan01g3427 258 ProSiteProfiles PPC domain profile profile. 124 258 IPR005175 -
Tan01g3427 258 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 239 IPR039605 GO:0003680(InterPro)
Tan01g3427 258 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 238 IPR005175 -
Tan01g3427 258 MobiDBLite consensus disorder prediction 18 80 - -
Tan01g3427 258 Gene3D - 129 255 - -
Tan01g3427 258 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3423 Tan-Chr1:98251196 Tan01g3427 Tan-Chr1:98340217 1.30E-60 dispersed
Tan01g3427 Tan-Chr1:98340217 Tan10g0352 Tan-Chr10:2874910 2.80E-68 dispersed
Tan01g3426 Tan-Chr1:98340217 Tan01g3427 Tan-Chr1:98340217 4.80E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3427 - - - 0.0