Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3477 ATGTTAGTTTCAATGAATTGTATTGACTTTTGTACTGTTCCTTCAATTGTTTTGATTTTCCTTTCCAGGTCCTTACAGGGTAATCAGTTATCAGGTCCCATTCCACCAGTAATAGGTCTGATGCAGGCGCTTGCTGTGCTAGATTTGAGCTGCAACATGTTATCTGGTCCAATCCCCTCTATCTTGGGGAATCTGACTTACACTGAGAAACTGTACTTGCACAGTAACAAGCTCACTGGATCCATTCCGGCCGAGCTTGGGAATATGACGAAGCTCCATTATCTGGAACTGAATGATAATCATCTTACTGGGAATATTCCAGCTGAGCTTGGGAAACTCACGGATCTGTTTGATCTAAATGTTGCTAATAACAACCTTGGAGGGCCTATCCCTGATAATCTTAGCTCATGCACAAATCTCAACAGCCTAAATGTGCATGGCAACAAGTTGAATGGAACTATTCCGCCGTCTTTCCAGAGGCTGGAGAGTATGACTTACTTGAATCTCTCCTCAAACGATCTACGAGGTCCGATTCCAGTTGAGCTGTCTCGTATTGGCAATTTGGATACGTTAGACATTTCGAATAACAAAATTAGTGGCACAATTTCCTCGTCCTTCGGCGATCTGGAACATCTTCTAAAGCTAAATTTAAGCAGGAACCATTTAATGGGAATTATTCCAGCTGAATTTGGCAATCTAAGGAGTGTAATGGAAATAGATATTTCACACAATCAGCTCTCTGGGCTCATTCCTCAAGAACTGAGTCAACTTCAAAATCTGCTCTCCTTGAGACTCGAAAACAACAATTTATCTGGGGATGTGACGTCGCTGATTAACTGCTTAAGTCTTACTGAATTAAACGTATCTTATAACAGTCTAGCTGGTGACATTCCCACAAGCAACAACTTCTCTAGGTTTTCATCTGACAGTTTCCTTGGAAATGTTGCCCTCTGTGGATATTGGAATAGCAACAACTATCCCTGCCATGAAGTTCGTACGACAGAGCGAGTGACAATATCTAAAGCCGCTATCTTGGGAATTGCTCTTGGTGCTCTAGTTATTCTTCTAATGATTCTCCTAACGGTGTGCCGTCCAAACAACACAATACCTTTCCCAGATGGATCACTTGATAAACCAGTTACCTACTCAACTCCCAAGCTAGTGATCCTTCACATGAACATGGCACTTCACGTGTATGAGGATATTATGAGGATGACCGAAAATCTGAGCGAAAAGTACATAATCGGACATGGAGCTTCAAGCACAGTCTACAAATGTGTACTGAAGAATTGCAAACCTGTGGCTATCAAAAAGCTTTACTCTCACCAGCCCCTAAGCATGAAGGCATTCGAGACCGAACTTGAAACCGTGGGTAGCATCAAGCACAGAAATCTAGTCAGCCTCCAAGGATACTCCTTGTCCCCCTCTGGAAATCTCCTCTTCTATGACTACATGGAAAATGGCAGTCTTTGGGACCATCTACATGGCTCTAGCTCTACCAAGAAGAAAAAACTTGACTGGGACACTCGGCTTAATATTGCACATGGAGCAGCTCAAGGACTATCATATCTACACCATGATTGTAGCCCTCGCATTATCCACAGGGATGTCAAGTCATCAAACATTCTATTAGACAAGGATTTTGAAGCCCATCTCACTGATTTTGGCATCGCCAAGAGTTTATGCACCTCGAAGACTTATACATCCACTTATATCATGGGAACCATTGGATACATCGATCCAGAGTATGCTCGAACTTCCCGACTTACTGAGAAGTCTGATGTTTACAGCTTTGGCATTGTGTTGCTTGAATTGCTCACAGGAAGGAAAGCTGTGGACAATGAATCAAACCTCCACCAATTGATCTTATCAAAGACAGCCAACAATGCTGTAATGGAGACAGCTGATCCTGAAATAACTGCAACTTGCAAGGACCTTGGAGCTGTAAAGAAGGCATTTCAGCTTGCTCTCCTATGCACAAAGAGGCAGCCATCCGATCGACCAACAATGCACGAAGTAACGCGCGTCATCAGTAGTCTCCTTCCCTGTGCCACACCACTGAAGCCAACGCCAACCATAACATCCCTGCCTCCATCTGCAAAAGTCCCTTGCTACAAGGACGAGTATGCAAATCTAAAAACGCCACACGTGCTGAACTGCCCGTCCATGAGCACCTCAGATGCCCAGCTCTTCCTCAAATTCGGAGAGGTTATATCACAAAACAGTGAGTAA 2232 43.64 MLVSMNCIDFCTVPSIVLIFLSRSLQGNQLSGPIPPVIGLMQALAVLDLSCNMLSGPIPSILGNLTYTEKLYLHSNKLTGSIPAELGNMTKLHYLELNDNHLTGNIPAELGKLTDLFDLNVANNNLGGPIPDNLSSCTNLNSLNVHGNKLNGTIPPSFQRLESMTYLNLSSNDLRGPIPVELSRIGNLDTLDISNNKISGTISSSFGDLEHLLKLNLSRNHLMGIIPAEFGNLRSVMEIDISHNQLSGLIPQELSQLQNLLSLRLENNNLSGDVTSLINCLSLTELNVSYNSLAGDIPTSNNFSRFSSDSFLGNVALCGYWNSNNYPCHEVRTTERVTISKAAILGIALGALVILLMILLTVCRPNNTIPFPDGSLDKPVTYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGHGASSTVYKCVLKNCKPVAIKKLYSHQPLSMKAFETELETVGSIKHRNLVSLQGYSLSPSGNLLFYDYMENGSLWDHLHGSSSTKKKKLDWDTRLNIAHGAAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCTSKTYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHQLILSKTANNAVMETADPEITATCKDLGAVKKAFQLALLCTKRQPSDRPTMHEVTRVISSLLPCATPLKPTPTITSLPPSAKVPCYKDEYANLKTPHVLNCPSMSTSDAQLFLKFGEVISQNSE 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 100039036 100044689 + Tan0015849.3 Tan01g3477 740901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3477 743 Gene3D Transferase(Phosphotransferase) domain 1 485 684 - -
Tan01g3477 743 Pfam Protein kinase domain 412 674 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g3477 743 Gene3D Phosphorylase Kinase; domain 1 379 484 - -
Tan01g3477 743 SMART serkin_6 409 681 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g3477 743 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 276 678 IPR050647 GO:0001558(PANTHER)|GO:0010286(PANTHER)
Tan01g3477 743 SUPERFAMILY L domain-like 24 307 - -
Tan01g3477 743 SUPERFAMILY Protein kinase-like (PK-like) 386 675 IPR011009 -
Tan01g3477 743 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 380 484 - -
Tan01g3477 743 CDD STKc_IRAK 415 680 - -
Tan01g3477 743 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 485 688 - -
Tan01g3477 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g3477 743 ProSiteProfiles Protein kinase domain profile. 409 681 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g3477 743 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524(InterPro)
Tan01g3477 743 Gene3D Ribonuclease Inhibitor 11 329 IPR032675 -
Tan01g3477 743 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 56 330 - -
Tan01g3477 743 Pfam Leucine rich repeat 44 102 IPR001611 GO:0005515(InterPro)
Tan01g3477 743 Pfam Leucine rich repeat 187 246 IPR001611 GO:0005515(InterPro)
Tan01g3477 743 Pfam Leucine rich repeat 119 174 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3475 Tan-Chr1:100037468 Tan01g3477 Tan-Chr1:100039036 6.70E-06 dispersed
Tan01g3477 Tan-Chr1:100039036 Tan07g0303 Tan-Chr7:6312189 5.40E-149 dispersed
Tan01g3476 Tan-Chr1:100037468 Tan01g3477 Tan-Chr1:100039036 6.60E-06 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67085 PF00069 Pkinase 3.10E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3477 K20718 - csv:101214398 1321.22