Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3523 | ATGGGCTATCTGAATTCAGTATTGTCTTGCTCGAGCCAGATTCATGCTGCTGAGGAGGCTCCTGTAAGCGGCGGGGGACTAAGTCAGAACGGAAAGTTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGAGCTTCTATGGAAGATTTTTATGAAACACGAATAGATGGCGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTCGATGGTCATGGTGGAGCACGAGCTGCTGAATATGTGAAGCACAATCTTTTTAGTAATTTGATCAGGCATCCAAAGTTCATATCAGATACCAAATCTGCCATAGCTGATGCGTACAACCACACCGACACAGAATTTCTGAAGTCGGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGTGACCGCTTACTTGTTGCAAATGTGGGCGATTCTAGAGCTGTTATTTGCCGGGGTGGCACTGCCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACGACGAATTGAGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCATTTGGCGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCACGCTCGAGTTTCTTATACTTGCAAGTGATGGATTGTGGGATGTTGTCACTAATGAGGAAGCTGTTGCTATGACTAAACCAATTCAGGACCCAGAAGAGGCGGCGAAGAGGTTGATGCTAGAAGCATATCAAAGAGGCAGTGCAGATAACATTACTTGTGTCGTCGTCCGTTTCTTGGCAAATCAAGGAAGTCCCTCTCGTGGAACTTCTGGGTAA | 882 | 45.92 | MGYLNSVLSCSSQIHAAEEAPVSGGGLSQNGKFSYGYASSPGKRASMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYNHTDTEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSTLEFLILASDGLWDVVTNEEAVAMTKPIQDPEEAAKRLMLEAYQRGSADNITCVVVRFLANQGSPSRGTSG | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 100383347 | 100388324 | - | Tan0002089.1 | Tan01g3523 | 740947 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3523 | 293 | PANTHER | PROTEIN PHOSPHATASE | 30 | 279 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Tan01g3523 | 293 | Gene3D | - | 26 | 285 | IPR036457 | - | |
Tan01g3523 | 293 | SUPERFAMILY | PP2C-like | 28 | 280 | IPR036457 | - | |
Tan01g3523 | 293 | CDD | PP2Cc | 33 | 280 | IPR001932 | - | |
Tan01g3523 | 293 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 280 | IPR001932 | - | |
Tan01g3523 | 293 | FunFam | probable protein phosphatase 2C 59 | 26 | 284 | - | - | |
Tan01g3523 | 293 | ProSitePatterns | PPM-type phosphatase domain signature. | 65 | 73 | IPR000222 | GO:0043169(InterPro) | |
Tan01g3523 | 293 | SMART | PP2C_SIG_2 | 45 | 280 | IPR001932 | - | |
Tan01g3523 | 293 | Pfam | Protein phosphatase 2C | 63 | 273 | IPR001932 | - | |
Tan01g3523 | 293 | SMART | PP2C_4 | 24 | 278 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0142 | Tan-Chr1:1319155 | Tan01g3523 | Tan-Chr1:100383347 | 1.80E-94 | dispersed | |
Tan01g3523 | Tan-Chr1:100383347 | Tan11g1206 | Tan-Chr11:9994268 | 5.80E-99 | dispersed | |
Tan01g3523 | Tan-Chr1:100383347 | Tan02g0200 | Tan-Chr2:1718196 | 7.00E-52 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3523 | K17506 | - | csv:101216117 | 571.622 |