Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3528 ATGGCGAAAACGGCGTCGTATGGGAAGATATGCAAGTTTTTCCTTCTTCTGGTTTTATTTGTTCCGGCGTCCACGGCGGCCTTATCGTTCGGTTTCTATGCTGCCACGTGTCCCGCGGCAGAGTTTATAGTAAGGAACACCGTCAGATCGGCTTCCTCCCAGGACCCCTCCGTCCCCGGCAAGCTCCTCCGGTTGCTGTTCCATGACTGTTTTGTTGAGGGCTGTGACGCTTCTGTATTGGTCCAAGGAAACGGAACAGAAAGAACGGATCCGGCAAACAGGTCACTTGGAGGATTTGAAGTGATCGATTCAGCTAAAAGAGCCCTCGAGTTTTTCTGTCCTGGAACTGTTTCCTGTGCCGACATTGTCGTTTTGGCCGCCAGAGATGCCGTTGAATTCGCCGGCGGGCCCTCCGTCCAAGTCCCGACCGGCCGGCGAGACGGAAAGATCTCGACGGCGACAAACGTCCGACCAAACATCGTCGACACAAGCTTTTCAGTCAACCAAATGATGAATCTCTTCTCATCAAAAGGGCTGTCGGCGGACGATCTCGTCATCCTCTCCGGGGCCCACACCATCGGAACGGCCCACTGCAGCGCCTTTAGTGACCGCTTCAGAAGAGGCCCAAACGGCCAACTAACCCTCATCGACTCCTCTCTCGACGGCGCTTACGCCGACGAGCTTGTGCGGCGGTGCCCCGCCGGCGCCGCCCCTGCCGTCACCGTCGACAACGATCCGACAACGGCGTTTGTCTTCGACAATCAGTACTACAAAAACATTCTGTCGCACAAAGGACTGTTTCAGTCGGATTCCGTGCTGATTAGCGACGGCCGGACCAGGGCTCAGGTGGAGAGCTTTGCCAGGGATCAGATTGGGTTTTTTGAGAACTGGGCTCAATCGTTCTTGAAACTTAGCAGTGTTGGAGTTAAAAGTGGGGATGAAGGAGAAATTAGAGTCTCTTGTTCTGCTATTAATGTTTGA 981 54.23 MAKTASYGKICKFFLLLVLFVPASTAALSFGFYAATCPAAEFIVRNTVRSASSQDPSVPGKLLRLLFHDCFVEGCDASVLVQGNGTERTDPANRSLGGFEVIDSAKRALEFFCPGTVSCADIVVLAARDAVEFAGGPSVQVPTGRRDGKISTATNVRPNIVDTSFSVNQMMNLFSSKGLSADDLVILSGAHTIGTAHCSAFSDRFRRGPNGQLTLIDSSLDGAYADELVRRCPAGAAPAVTVDNDPTTAFVFDNQYYKNILSHKGLFQSDSVLISDGRTRAQVESFARDQIGFFENWAQSFLKLSSVGVKSGDEGEIRVSCSAINV 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 100449636 100452599 - Tan0005948.1 Tan01g3528 740952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3528 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Tan01g3528 326 CDD secretory_peroxidase 28 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan01g3528 326 FunFam Peroxidase 31 172 - -
Tan01g3528 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 Gene3D Peroxidase, domain 2 161 304 - -
Tan01g3528 326 FunFam Peroxidase 161 304 - -
Tan01g3528 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 Pfam Peroxidase 44 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 PANTHER - 16 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3528 326 Gene3D - 31 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3528 Tan-Chr1:100449636 Tan11g0147 Tan-Chr11:1382984 2.50E-66 dispersed
Tan01g3528 Tan-Chr1:100449636 Tan05g0860 Tan-Chr5:6743085 5.90E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3528 K00430 - csv:101211842 561.607