Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3546 | ATGGGTATATACCTCAGCAATCCCAAAACTGAGAAGTCCTCTGAAGATGGTGAGAATAGACGGCTTAGATATGGACTATCATCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTCGGTGTTTATGATGGCCATGGAGGTAAGGTGGTTGCAAAGTTCTGTGCCAAGTTCTTACATCAGCAAGTGAAGAAAAATGAAGCTTATGCCGCTGGAGATATAGGAACTTCTGTGCAGAAAGCATACTTAAGAATGGATGAAATGATGCGTGGACAAAGAGGTTGGAGAGAATTAGCCGTTCTAGGTGACAGATTGAACAAGTTCACTGGCATGATAGAAGGGTTAATCTGGTCACCAAGAAGCAGTGATGCAAATGACCAGGCTGATGATTGGACTTTTGAGGAGGGTCCGCACTCTGATTTTTCTGGCCCAACTTCGGGATGTACAGCTTGTGTTGCAATTATTAGAAATAACAAGCTTCTTGTTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCAAGAAAGGGCCAGGCTCACAGTCTCTCTAGGGATCACAAGCCTGATCTTGAGGCTGAGAGGGACAGAATTCTGAAAGCTGGTGGTTTTATTCATGCTGGACGAGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGCGACATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAGGCAAATTATCACGGCAAATCCTGATGTAACCACTGTTGAGCTTTGCGATGATGACGAGTTTATTGTGATAGCCTGTGATGGGATATGGGATTGCATGTCTAACCAGCATCTGGTAGATTTTATACATGAACAGCTAAAGTCAGTAAGTAAAATATTTTAA | 897 | 43.14 | MGIYLSNPKTEKSSEDGENRRLRYGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHGGKVVAKFCAKFLHQQVKKNEAYAAGDIGTSVQKAYLRMDEMMRGQRGWRELAVLGDRLNKFTGMIEGLIWSPRSSDANDQADDWTFEEGPHSDFSGPTSGCTACVAIIRNNKLLVANAGDSRCVLSRKGQAHSLSRDHKPDLEAERDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAERQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQHLVDFIHEQLKSVSKIF | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 100557282 | 100567291 | + | Tan0004998.6 | Tan01g3546 | 740970 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3546 | 298 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169(InterPro) | |
Tan01g3546 | 298 | SMART | PP2C_4 | 13 | 297 | IPR001932 | - | |
Tan01g3546 | 298 | Gene3D | - | 1 | 297 | IPR036457 | - | |
Tan01g3546 | 298 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 298 | IPR001932 | - | |
Tan01g3546 | 298 | PANTHER | PROTEIN PHOSPHATASE 2C | 19 | 289 | IPR015655 | GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro) | |
Tan01g3546 | 298 | CDD | PP2Cc | 23 | 295 | IPR001932 | - | |
Tan01g3546 | 298 | SUPERFAMILY | PP2C-like | 3 | 292 | IPR036457 | - | |
Tan01g3546 | 298 | Pfam | Protein phosphatase 2C | 135 | 293 | IPR001932 | - | |
Tan01g3546 | 298 | Pfam | Protein phosphatase 2C | 23 | 104 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3546 | Tan-Chr1:100557282 | Tan01g3548 | Tan-Chr1:100557282 | 4.60E-176 | dispersed | |
Tan01g3545 | Tan-Chr1:100557282 | Tan01g3546 | Tan-Chr1:100557282 | 2.40E-174 | tandem | |
Tan01g3546 | Tan-Chr1:100557282 | Tan01g3547 | Tan-Chr1:100557282 | 1.90E-174 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3546 | K17499 | - | csv:101211604 | 570.852 |