Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3568 ATGGCCTTATTTCGCAAGTTCTTTTATCGGAAGCCACCGGACGGGCTTTTAGAGATATCCGAAAGGGTTTATGTTTTCGACTGCTGCTTTACAACGGAGGTTTTGGAAGAAGACGAATACAAAGTCTATATTGGAGGCATTGTTGGACAACTTCGTGAGAGTCTCACCGACGCTTCATTCATGGTGTTCAATTTCCGAGAGGGGGAGAGTCAAAGCCTGGTTACTAATATATTATCTGTGTATGATATGACTGTGATGGACTATCCTCGACAATATGAAGGCTGCCCTCTACTCACCATGGAGATGATCCACCACTTCTTAAGATCCAGTGAAAGCTGGCTCTCACTTGGGCAGCAAAATATACTTTTGATGCACTGTGAACGAGGGGGGTGGCCAGTTTTGGCTTTCATGTTGGCCGCTCTTTTGATTTACAGGAAGCAGTATGCTGGGGAGCAGAAAACTTTGGACATGATTTACAAGCAAGCACCTCGGGAGCTTTTGCAGTTGATGTCACCTCTTAATCCACTGCCTTCACAATTGAGGTATCTTCAATATGTATCAAGGAGAAATGTGGGATCAGAATGGCCTCCGCTTGACAGGGCGCTTACTCTAGACTGCGTAATTATTAGATTTATTCCTAATATGGATGGGGAAGGTGGTTGCCGCCCAATATTTAGGATATATGGACAGGATCCCTTTATGGCTGCTGATCGAACTTCCAAAGTATTGTTCTCAACCCCCAAAAAGAGTAAACTTGTTCGTCAGTATAAGCAGGTAGATTGTGAACTAGTTAAAATTGATATCCATTGCCATATTCAAGGTGATGTTGTTCTTGAATGTATAAGTTTGGACAATGATCTGGAAAGGGAGGAGATGATGTTTCGAGTTATGTTCAATACAGCATTTATAAGGTCAAATATTTTGATGCTTAACCGTGATGACATCGATATCTTATGGCATGCAAAGGATCAATTTCCAAAGGATTTCAGAGCAGAGGTTATTTTCTCAGAGATGGATGCTACTGCATCACGTATTTCAATTGAATTGCCAAGTATTGAGGAGAAAGATGGTCTGCCAATTGAAGCATTTGCTAGAGTTCAAGAGATCTTTAGCAATGTGGACTGGCTAAGCCCAAGGGCAGATGCAGCTCTTACTGCGCTTCAGAAAATAACAGCTTCAAATTTTCTTCAGGAGAAACTGGTTAGTTCTGGCTCTTTAGACAGAAACCAGTTGCTTGACTTATCTTTTGAAAAACTAATCTCAGAATCAGACACATCTGAAGACAATATTAGAAGTCCCCGATTGAAGATACAAACGAATCAATCTCAGCCTTCTCCTGAACTATCTCGCTCTGCAAGTTCAGTGAGGTCAAAGATTGAACCCCCAGAATTGCAGGTTGCTCTCCAACTGCCACCTCAGACTAAAATCATTACTCAGCGAATACCTCAACCTTCCTTGTCTACACCAGTCTCCTTCCGTAGTTCTGTGCAAGGTTCACCTCGCCCAATAGTGAGATATCACAGTGCGCCATCAGCTCTTGGCATTACAGCTTTATTACATGATCATTCCAAATTTAGTACTAAAGAAGTCATACATCCAGCGACAATATCTTCACCATCACCTGCTCGCTTGACTACGAGTGCTCTAGATTCACCTAAAGATATTCAACCTAGTAAGCTTCCTATTTTGCCTCTCCCGCTGCCATCAGAGCCAAGTTCTACATCAGAAAAGTCTTCTATCACCACGTCAACGTCAACCATTCCTGATCCGTTGTCACTCCGCCAACTTTCTTTGAAACCTATCAAACCTTCAATTTCTCAATCGTCTCAAACCACATCACGGGGGAGAAGTCAATTATCACCACCATCTTCATTACAACTAACGCCTACCTCTTTTCCTGGGGAGGCCCCACCCTCTTTCAGTGAGAACTTACCTTCAATATCCTCTTCTTCTCCTTTATTAAGATCATCTCCATCTTCCTATACTAAGGAATCATTTTCCATTCCCACCCCTCCCCCTCCCCCTCCCCTCTTTCATCTCGATTCACCTTCGTTTTTAGTAACATCTTCATCTTCTAGTAGGACGAATGGTTCAATTTCCTCATCTCCACCACAACCTTCTTCAACAACACTATTATTATCCTCTACGAAGACATCAGCTCCAATTGTTCCTCAATCTTCTTGGTCTGATGATCGTATAGTTTCTTCTCAATCACCTAAAAAGAATTTGACAGTAGTCCCTTCCCCTCCTCCTCCACCTCCTCCTCCACCTCCATGTTCTAGCCCTATCTTGGGCACTAGTGTTGTCTCACCAACATCGGTGCCCCCATCCCCACCTCCTCTTCCTTCATGGAAGGACCTTATAATCACACTCATGCATGATCCTCCACCTTCACCTCTAGCCCCACCTTTGCCTCGATCTTCTTTGAGTTCAGGATCTACTTGTGGTTCTAATAACTTGTCTTTAGGGCCACCGCCGCCACCATCTCCTCCTAGTATTGCACCACATGATTCTACCACGGTAGTTAGGAACTTGATGGTTGTACCTGGCCCTCCGCCTCCCCCACCTCCACCTTCTCCTAGTTCTTCCCTAGGTCCTAGTATTGTATCTTCAGGTCCGCCGCCACCTCCTCCTCCTCCTGGTCTTGCACCAAATGTTTCTGCAACTACGCATGTCTCTGGCCCCCCTCCTCCTCCTCCTCCACCTTTTGCAAATTCTGGGTCCACCTTATGTCCAGGTGTTGTAACGTCAGCTCCACCTGCTCCACCTCCTCCAGGTTTTTCAATGAAGGGTCCTGCAACACATGCCCCACCTGCACCCCCTCCTCCAGGTCTCAGCGGTAATAAACTTTCAAATGTCAATGGTACTTCCTCACAGTCTCACGTTGGCATTAATAACAGCAACATACCTTCTATTCCTGGACCACCTTCCAGTGGTTTATTCAATGCAAAGGGACGAGGCCTTGGACGGTTGAACCCCAAAAACCTGTCTCAACCTAAAAGGTCCAATTTGAAGCCTTATCACTGGTTAAAATTAACGAGGGCCATGCAGGGAAGCTTATGGGCAGAGACACAAAAGACTGATGAAGCTTCCAAAGCTCCGGAGTTTGACATGTCCGAACTTGAAAGTCTTTTCTCTGCAGTTGCACCAAATTCAGAGGCTGGAGGTTCTGGTGGAAATTCGAATCGCCGAGCCTCAGGGCCGAAATCAGATAAAGTTCATTTGATTGAGCTTCGACGGGCGTATAATTGCGAAATTATGCTCTCTAAAGTTAAGATTCCTTTGCCTGATATGATGTGTTCAGTCCTTGCATTGGATGAGTCGGCATTAGATGTGGATCAGGTTGAGAACCTAATCAAGTTTTGTCCAACAAAAGAAGAAATGGAATTACTTAAGGGGTACAGTGGGGACAAGGACAACCTGGGAAAATGCGAACAATTCTTCTTAGAATTGATGAAAGTCCCACGAGTGGAGTCCAAGCTAAGGGTTTTTTCTTTCAAGATACAATTCCATTTGCAGGTCTCTGACCTTAGAAATAGTCTGAATACTATCAATTCGGCATCTGAGGAGATCAGAAGTTCGATAAAGTTGAAAAGGGTAATGCAAACTATCCTTTCGTTGGGTAATGCTTTGAACCACGGAACGGCTAGAGGTTCTGCTATTGGATTTCGGCTTGATAGTCTCCTCAAACTCACTGATACGCGAGCCAGAAACAATAAGATGACACTCATGCATTATCTATGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTTTAGATTTTCCAAAGGACCTTCTGAGTTTGGAAGCTTCTACAAAGATACAACTGAAATATTTGGCAGAAGAAATGCAAGCCATAAGCAAAGGGCTTGAGAAGGTTGTTCAGGAATTGGCTAATTCAGAAAACGATGGGCCCATTTCAGAAACTTTTTGCGGGGTACTGTATAACATTTAA 3954 44.11 MALFRKFFYRKPPDGLLEISERVYVFDCCFTTEVLEEDEYKVYIGGIVGQLRESLTDASFMVFNFREGESQSLVTNILSVYDMTVMDYPRQYEGCPLLTMEMIHHFLRSSESWLSLGQQNILLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVGSEWPPLDRALTLDCVIIRFIPNMDGEGGCRPIFRIYGQDPFMAADRTSKVLFSTPKKSKLVRQYKQVDCELVKIDIHCHIQGDVVLECISLDNDLEREEMMFRVMFNTAFIRSNILMLNRDDIDILWHAKDQFPKDFRAEVIFSEMDATASRISIELPSIEEKDGLPIEAFARVQEIFSNVDWLSPRADAALTALQKITASNFLQEKLVSSGSLDRNQLLDLSFEKLISESDTSEDNIRSPRLKIQTNQSQPSPELSRSASSVRSKIEPPELQVALQLPPQTKIITQRIPQPSLSTPVSFRSSVQGSPRPIVRYHSAPSALGITALLHDHSKFSTKEVIHPATISSPSPARLTTSALDSPKDIQPSKLPILPLPLPSEPSSTSEKSSITTSTSTIPDPLSLRQLSLKPIKPSISQSSQTTSRGRSQLSPPSSLQLTPTSFPGEAPPSFSENLPSISSSSPLLRSSPSSYTKESFSIPTPPPPPPLFHLDSPSFLVTSSSSSRTNGSISSSPPQPSSTTLLLSSTKTSAPIVPQSSWSDDRIVSSQSPKKNLTVVPSPPPPPPPPPPCSSPILGTSVVSPTSVPPSPPPLPSWKDLIITLMHDPPPSPLAPPLPRSSLSSGSTCGSNNLSLGPPPPPSPPSIAPHDSTTVVRNLMVVPGPPPPPPPPSPSSSLGPSIVSSGPPPPPPPPGLAPNVSATTHVSGPPPPPPPPFANSGSTLCPGVVTSAPPAPPPPGFSMKGPATHAPPAPPPPGLSGNKLSNVNGTSSQSHVGINNSNIPSIPGPPSSGLFNAKGRGLGRLNPKNLSQPKRSNLKPYHWLKLTRAMQGSLWAETQKTDEASKAPEFDMSELESLFSAVAPNSEAGGSGGNSNRRASGPKSDKVHLIELRRAYNCEIMLSKVKIPLPDMMCSVLALDESALDVDQVENLIKFCPTKEEMELLKGYSGDKDNLGKCEQFFLELMKVPRVESKLRVFSFKIQFHLQVSDLRNSLNTINSASEEIRSSIKLKRVMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLLSLEASTKIQLKYLAEEMQAISKGLEKVVQELANSENDGPISETFCGVLYNI 1317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 100659106 100668023 + Tan0009672.2 Tan01g3568 740992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3568 1317 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Tan01g3568 1317 PANTHER FORMIN-J 1 1314 IPR051144 -
Tan01g3568 1317 SMART PTEN_C2_2 197 337 IPR014020 -
Tan01g3568 1317 SUPERFAMILY Formin homology 2 domain (FH2 domain) 920 1308 - -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 847 884 - -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 891 906 - -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 744 762 - -
Tan01g3568 1317 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 532 553 - -
Tan01g3568 1317 SMART it6_source 993 1317 IPR015425 -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 569 592 - -
Tan01g3568 1317 Pfam Formin Homology 2 Domain 998 1314 IPR015425 -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 805 820 - -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 1049 1070 - -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 947 975 - -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 532 1002 - -
Tan01g3568 1317 Gene3D Formin, FH2 domain 988 1314 IPR042201 -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 423 456 - -
Tan01g3568 1317 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Tan01g3568 1317 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Tan01g3568 1317 Gene3D - 196 341 - -
Tan01g3568 1317 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 432 456 - -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 683 743 - -
Tan01g3568 1317 ProSiteProfiles Formin homology-2 (FH2) domain profile. 993 1317 IPR015425 -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 599 666 - -
Tan01g3568 1317 MobiDBLite consensus disorder prediction 916 945 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3568 Tan-Chr1:100659106 Tan09g1556 Tan-Chr9:67424989 6.80E-288 dispersed
Tan01g3567 Tan-Chr1:100659106 Tan01g3568 Tan-Chr1:100659106 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3568 K28090 - csv:101214019 1849.33