Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3626 ATGAAGCAGAGTATATCTGAGGCAGTATCTTCATCATCCACCACGGGTTTATCGGAGCAGTCTCAATCCTCCTCCTCGACGCCGTTGGAGAAGCCCCAATCCATATCGGCTGCGGCGGCGGCGGAGGATTTGGCCGTCGGGTCTAGAGATGGCGGCGGGGCGCAGGAAACGGTGACTGTGGATCGGCGGGGGGATTTCTCTGCCGTATGTAGATGGACAGTACAAAATTTCCCGAGAATCAAGGCTAGGGCTCTATGGAGCAAGTATTTTGAGGTCGGAGGTTACGATTGCCGTCTGTTGATATATCCGAAGGGGGATTCCCAAGCTCTGCCGGGGTATATTTCAATCTACCTTCAAATCGTGGACCCGCGCGGTACATCGTCTTCTAAATGGGATTGCTTTGCGAGCTACCGTTTGGCCATCGTCAACGTTCTCGATGATTCGAAGACCGTTCATCGGGATTCTTGGCACCGTTTCTCGAGCAAGAAGAAGTCACACGGATGGTGCGATTTTACTCCCTCTTCCACCGTGTTTGATTCTAAGCTCGGCTATTTGTTTAATAATGAGTCCATTTTGATCACCGCTGATATTCTAATCCTCAATGAGTCTGTAAACTTTACCCGGGATAACAATGAGCCAGCGTCATCTATGATGATGGCATCCTCGGTTGTTGCTTGCCCTGTGCCTGAGGTGCTCAGCGGCAAGTTCACCTGGAAAGTTCATAATTTTAGTTTGTTTAAAGAGATGATAAAAACACAGAAAATAATGAGCCCCGTGTTCCCAGCTGGAGAGTGTAATTTGAGGATTAGCGTCTATCAGAGCTCAGTTAATGGGACTGAGTATTTATCAATGTGTCTAGAGAGCAAGGATACAGAAAAGACAGTAATATTACCTGATAGGAGTTGTTGGTGTTTGTTTCGGATGTCTGTGTTGAACCAGAAGCCTACTTTGAATCACATGCATCGAGACTCATATGGGAGATTTGCAGCTGATAATAAGAGTGGGGATAATACCAGTTTGGGGTGGAATGACTACATGAAGATGTCTGATTTTGTTGGGCAAGATTCTGGTTTTTTAGTTGATGATACCGCTGTGTTTAGTACCTCTTTTCATGTGATCAAGGAGTTTAGTAGTTTCTCGAAGAATGGTGGAGTAATTGGAGGTAGAAATGGAAGTGGCATTAGGAAATCAGATGGTCATATGGGAAAATTCACGTGGAGGATTGAGAACTTCACAAGGTTGAAGGATCTTTTGAAGAAGAGGAAGATTACAGGTCTTTGCATCAAGAGCAGGAGATTCCAAGTCGGGAATCGGGACTGTCGTCTCATTGTTTATCCTCGAGGGCAGTCTCAACCACCATGTCACCTTTCAGTCTTTCTTGAAGTTACGGATTCAAGAAACACTTCCAGTGATTGGAGTTGTTTTGTGAGTCATCGGTTGTCAGTTGTGAACCAGAAGATGGAAGAGAAATCTGTTACAAAGGAGTCTCAAAACCGGTACTCCAAAGCTGCAAAAGACTGGGGATGGCGTGAATTTGTCACACTTACTAGCCTCTTTGATCAGGATTCCGGTTTTCTTGTTCAGGATACTGTAATATTCTCAGCAGAGGTCCTTATATTAAAGGAGACATCTGTGATGCAGGATTTTATTGATCAAGACGTGGAGGCAACTGGTTCCAGCTCTGTGATGGATAAGGTAGCAAAAAGAAGTTCATTTACATGGAAGGTGGAGAACTTTTTGTCCTTCAAGGAAATAATGGAAACCCGTAAAATTTTTAGTAAATTCTTTCAAGCTGGTGGATGTGAGCTCCGTATTGGCGTCTATGAGTCCTTTGACACCATTTGCATCTATCTGGAGAGTGATCAGTCTGTTGGCAGTGATCCAGATAAAAACTTTTGGGTCCGATACAAAATGGCCGTGGTGAATCAAAAATATCCAGCAAAAACTGTATGGAAGGAGTCTTCTATTTGTACTAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCAGATATGCTAGAGGCAGAAGCAGGATTTCTTGTACGAGATACAGTTGTTTTTGTATGTGAAATATTGGATTGCTGCCCTTGGTTCGAGTTTTCAGATCTTGAGGTTTTGGCTTCAGAAGATGATCAGGATGCTTTGACTACTGATCCGGATGAGCTCATTGATTCAGAAGATAGTGAAGGAATAAGTGGTGATGAAGAAGACATTTTTAGAAACCTTCTATCTACAGCTGGATTTCATCTAACATACGGAGATAATCCTTCACAACCACAGGTCACTTTGCGGGAAAAACTTTTAATGGATGCTGGTGCAATTGCAGGTTTTCTTACTGGGCTTCGTGTTTATCTTGATGATCCTGCTAAAGTTAAGCGCTTGCTTCTTCCTACTAAGCTCTCCAGTAGCAATGATGGAAAGAAGGTCTCAAAGTCAGATGAGTCATCCCCCAGTTTAATGAATTTGCTTATGGGAGTCAAAGTCTTACAGCAGGCAATTATTGATTTACTGTTGGATATAATGGTCGAGTGTTGCCAACCTTCAGAAGGGGGCTCTGGAGACCAGTTGGAAACAAATTCAAAGCCTTCTGTTCCTAGCAGTGGAGCTACTACTACACCACTAGAAGGTGAAAATGAAAATGGAGCAATAGAGGCTGTAGATTGTCCTCCGTTTCAGAGATTGGATTCCGTTGATGAAAGTAGTAGTGCACCTGCTGTACAAAGCTCTGACATGATTAGAACCGATAGGCTGTGCAAGTCTCAACCTGAAGAGCTAATACATCCACCTGAAACATCTGCTGGGGTTTCAGAGAATGTCTTCCTTCGTACAAAGACCAAGTGGCCTGAGCAATCTGAGGAGCTTTTAGGCTTGATTGTAAATTCATTGAGAGCCCTAGATGGGGCTGTCCCTCGAGGATGTCCTGAGCCAAGAAGACGGCCTCAGTCCGCACAAAAGATTGCTCTTGTGCTGGATAAAGCTCCCAAGCATCTACAGTCTGACCTGGTTGCACTGGTACCCAAACTGGTTGAGCATTCAGAACATCCATTGGCTGCTGGTGTGCTTCTAGAACGGCTTCAACAGCCTGGTGCTGAGCCAGCACTGCGGATACCTGTTTTTGGTGCTCTTAGTCAATTGGAGTGTGGCACCGAAGTTTGGGAACAGGTTCTACTTAAATCTATTGAGTTTTTAGCAGATTCAAATGATGAGCCTCTTGCTGCAACTATAGATTTTGTTTTCAAAGCTGGAGCCCAGTGCCAACATCTCTCTGAAGCAGTGAGATCAGTACGTGTTAGGCTGAAGAATTTGGGCATGGAGGTTTCCTCATGTGTTCTTGATTTATTAAGTAAAACGGTAAATAGCTGGGGTGATGTTTCTGATATTATACTCAGAGATCTTGATTGTGATGATGATGCTGATGATTTCCACTCAAAAATATCACGTGAGCTTTTCTTATTTGGTGAACCTGGCCCTGCAGAAAGTTTGCATCCGTTGGATGAGCAGGATTTACATGCTGCTCGTCATTTTTCTGATATTTATATCTTGATTGAGATGTTATCTATACCTTGTCTTGCCGTTGAAGCATCACAGACATTTGAGAGAGCTGTAGCTCGTGGTGCCATCACAGCTAAATCTGTTGCTGTGGTGTTGGAAAAACGTCTTGCTCAAAAAGCAAATAGCAATGCTAGATTTGTAGCTGAAAGCTTCCAGCATGGAGATTCTGTAATAGATGGAGAAACTAGTGAGCAGCTGAGAGTCCAGCGGGATGATTTCACTTCTATTGTTGGTCTTGCCGAAACATTAGCACTCTCTAGAGACCCTTGCGTTAGAGGATTTGTGAAAATGCTGTATCCATTATTGTTTAAGTGGTATGCAAGCGAATCATATCGAGCCAGGATGCTAAAAAGATTGGTTGATCGTGTCACCAGCAGTACAGATAATAACCGTGAAGTAGATATGGATTTGGAAATTCTGGTTATGTTAATTGGTGATGAACAAGAAATAATTAGACCTGTGCTAAATATGATGCGGGATGTTGCTGAACTAGCAAATGTTGACCGTGCTGCTCTCTGGCACCAGTTATGTGCAACCGAAGATGAAATCATCCGTATTCGTGAAGAAAGCAAAGTAGAGATTTCAAATATGATGAAAGAAAAAGCAATTCTGTCACAAAAACTAAGTGAATCTGATGCCATGAACAATCGCCTTAAGGTTGAGATGAAGGCTGAGATGGAGCGATTTTCTCGCGAGAAAAAGGAACTTTCTGAACAAATGCATGATATCGAGAGTCAGCTTGAGTGGCTTCGTTCTGAGCGAGATGATGACATTGTGAAGTTAACAGCAGAGAAGAAAGTTCTCCATGATCGTCTCCATGATGCTGAGACTCAAATCGCGCAATTGAAATCCCGAAAACGTGATGAGATGAAGAAAGTGGTTAAGGAAAAGAATGCACTTGCTGAGAGGTTGAAGAGTGCTGAAGCTGCTCGAAAAAGATTTGATGAACAACTGAAACGGTATGCAAATGAGAATATGACGAGGGAAGAAATCCGGCAGTCACTGGAAGATGAAGTTCGCCGGCTTACACAAACAGTTGGACAAACTGAAGGAGAAAAGAGAGAGAAGGAGGAGCAGATTGCTCGATGTGAAGCGTATATTGATGGGATGGAAGCAAAATTGCAGGCCTGCCAGCAATATATCCATTCACTTGAAGCATCACTACAAGAGGAAATGTCAAGACATGCCCCTCTATATGGTGCTGGTTTGGAAGCTCTGTCAATGAAGGAGCTAGAGACATTATCCCGAATTCACGAAGAAGGATTAAGGCAAATCCATACTCTTCAGCAGCGCAAGGGGAGTCCGGCTGGAAGTCCTCTTGTGAGCCCTCATTCCCTCTCTCACAGTCATGGGTTGTACACTGCTGCACCGCCCCCAATGGCTGTCGGGTTGCCCTCTTCACTCATGCCCAATGGCTCAGGAATCCACAGCAATGGGCATGTGAATGGTGGTGCCGTTGGACCATGGTTCAACCATGCTTGA 5040 43.89 MKQSISEAVSSSSTTGLSEQSQSSSSTPLEKPQSISAAAAAEDLAVGSRDGGGAQETVTVDRRGDFSAVCRWTVQNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIVDPRGTSSSKWDCFASYRLAIVNVLDDSKTVHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNESILITADILILNESVNFTRDNNEPASSMMMASSVVACPVPEVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGTEYLSMCLESKDTEKTVILPDRSCWCLFRMSVLNQKPTLNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGQDSGFLVDDTAVFSTSFHVIKEFSSFSKNGGVIGGRNGSGIRKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQVGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSVMQDFIDQDVEATGSSSVMDKVAKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQSVGSDPDKNFWVRYKMAVVNQKYPAKTVWKESSICTKTWNNSVLQFMKVSDMLEAEAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSTAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSSSNDGKKVSKSDESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGGSGDQLETNSKPSVPSSGATTTPLEGENENGAIEAVDCPPFQRLDSVDESSSAPAVQSSDMIRTDRLCKSQPEELIHPPETSAGVSENVFLRTKTKWPEQSEELLGLIVNSLRALDGAVPRGCPEPRRRPQSAQKIALVLDKAPKHLQSDLVALVPKLVEHSEHPLAAGVLLERLQQPGAEPALRIPVFGALSQLECGTEVWEQVLLKSIEFLADSNDEPLAATIDFVFKAGAQCQHLSEAVRSVRVRLKNLGMEVSSCVLDLLSKTVNSWGDVSDIILRDLDCDDDADDFHSKISRELFLFGEPGPAESLHPLDEQDLHAARHFSDIYILIEMLSIPCLAVEASQTFERAVARGAITAKSVAVVLEKRLAQKANSNARFVAESFQHGDSVIDGETSEQLRVQRDDFTSIVGLAETLALSRDPCVRGFVKMLYPLLFKWYASESYRARMLKRLVDRVTSSTDNNREVDMDLEILVMLIGDEQEIIRPVLNMMRDVAELANVDRAALWHQLCATEDEIIRIREESKVEISNMMKEKAILSQKLSESDAMNNRLKVEMKAEMERFSREKKELSEQMHDIESQLEWLRSERDDDIVKLTAEKKVLHDRLHDAETQIAQLKSRKRDEMKKVVKEKNALAERLKSAEAARKRFDEQLKRYANENMTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQIARCEAYIDGMEAKLQACQQYIHSLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHTLQQRKGSPAGSPLVSPHSLSHSHGLYTAAPPPMAVGLPSSLMPNGSGIHSNGHVNGGAVGPWFNHA 1679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 101201452 101212777 - Tan0017793.1 Tan01g3626 741050

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3626 1679 ProSiteProfiles MATH/TRAF domain profile. 67 197 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 Coils Coil 1444 1559 - -
Tan01g3626 1679 MobiDBLite consensus disorder prediction 1 33 - -
Tan01g3626 1679 SMART math_3 406 518 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 SMART math_3 69 177 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 SMART math_3 238 351 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 SMART math_3 574 674 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 SUPERFAMILY TRAF domain-like 231 376 - -
Tan01g3626 1679 SUPERFAMILY TRAF domain-like 402 543 - -
Tan01g3626 1679 Gene3D - 1437 1629 - -
Tan01g3626 1679 MobiDBLite consensus disorder prediction 851 878 - -
Tan01g3626 1679 MobiDBLite consensus disorder prediction 1 37 - -
Tan01g3626 1679 CDD MATH 571 693 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 ProSiteProfiles MATH/TRAF domain profile. 401 537 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 ProSiteProfiles MATH/TRAF domain profile. 233 370 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 Coils Coil 1401 1439 - -
Tan01g3626 1679 CDD MATH 71 197 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 556 695 IPR008974 GO:0005515(InterPro)
Tan01g3626 1679 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 230 376 IPR008974 GO:0005515(InterPro)
Tan01g3626 1679 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 394 546 IPR008974 GO:0005515(InterPro)
Tan01g3626 1679 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 66 212 IPR008974 GO:0005515(InterPro)
Tan01g3626 1679 ProSiteProfiles MATH/TRAF domain profile. 569 693 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 CDD MATH 402 537 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 CDD MATH 234 366 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 PANTHER TRAF-LIKE FAMILY PROTEIN 11 1678 - -
Tan01g3626 1679 SUPERFAMILY TRAF domain-like 570 694 - -
Tan01g3626 1679 MobiDBLite consensus disorder prediction 853 878 - -
Tan01g3626 1679 SUPERFAMILY TRAF domain-like 68 205 - -
Tan01g3626 1679 Pfam MATH domain 235 367 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 Pfam MATH domain 71 191 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 Pfam MATH domain 571 693 IPR002083 GO:0005515(InterPro)
Tan01g3626 1679 Pfam MATH domain 403 537 IPR002083 GO:0005515(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3626 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3626 Tan-Chr1:101201452 Tan07g0632 Tan-Chr7:9787842 1.80E-19 dispersed
Tan01g3626 Tan-Chr1:101201452 Tan08g1566 Tan-Chr8:64411782 1.10E-19 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g501 . . . Bda03g00075 . . Bma04g00072 . . . Cma01g01513 . Car09g00391 . . . Cpe06g00327 . . . . . . . Cla05g01725 Cam05g1838 Cec05g1852 Cco05g1909 Clacu05g1825 Cmu05g1709 Cre05g1840 . . Cone17ag1011 . Lsi04g02117 Csa03g04321 Chy04g00379 . . . . . . Bpe04g00061 . . Sed05g1711 Cmo01g01566 Cmo09g00453 Cma09g00443 . . . . Cpe02g00443 Bhi09g02224 Tan01g3626 Cmetu04g2170 . Hepe01g2009 Mch11g0545 . . . . . . . . . . . Cme04g00422
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007058 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 1 2 37