Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3661 | ATGGAAGCAAATGCGGGATTGGTGGCTGGATCTTACAAGAGGAATGAGCTTGTTCGGATTCGCCACGATTCCGATAGTGGGCCTAAACCTCTAAAGAATATAAACAGCCAAACATGTCAAATATGTGGCGACACTGTTGGTCTTACGGCCTCTGGTGACGTCTTTGTCGCTTGCAATGAATGTGCCTTTCCTGTTTGTCGTCCGTGTTACGAGTATGAGAGGAAAGATGGGAACCAGTCTTGCCCTCAGTGCAAGACTAGATACAAGAGGCACAAAGGGAGTCCTCGAGTTGATGGTGATGATGATGAGGATGATGTTGATGACATCGAGAATGAGTTTAATTACATCCAAGGAAGTAGCAAGACAAAACGACAGTGGCATGGGGAAGATGCTGAGCTATCTACTTCTGCAAGACATGAGTCTCAACAGCCTATACCACTCCTTACCAATGGGCAATCAGTATCGGGCGAAATTCCTTGTGCTACCCCTGATAATCAATCAGTACGAACTACATCTGGTCCTTTGGGCCCTCCAGAAAAGCATATGCACTCACATCCTTATGTTGACCCACGGCAGCCAGTTCCTGTGAGAATTGTGGACCCGTCAAAGGATTTGAACTCTTATGGCCTTGGGAATGTTGACTGGAAGGAAAGAGTGGAAGGTTGGAAACTGAAACAAGAGAAAAACATGATGCAGATGACAAGTAGGTACACTGAAGGGAAGGGGGACATGGAAGGCACTGGGTCAAATGGAGAAGAACTTCAAATGGCTGATGATGCTAGACAACCTCTGAGTCGTGTGGTTCCGATTCCATCTTCTCACTTGACCCCGTACCGTGTTGTGATCATACTCCGACTTATTATTCTGGGCTTCTTCTTACAGTACCGTTTGACACACCCTGTGAAGAATGCATACCCATTGTGGTTAACATCAGTTATTTGTGAAGTTTGGTTTGCTCTATCCTGGCTTCTGGATCAGTTTCCAAAATGGTCTCCTGTCAATCGCGAGACCTTCCTCGAGAGACTTGCGCTAAGATACGATCGTGAAGGAGAACCATCGCAGTTAGCTCCTGTTGATGTCTTTGTTAGTACAGTGGATCCTCTCAAAGAGCCTCCACTTGTCACAGCAAATACTGTGCTTTCCATCCTTGCTGTGGACTACCCAGTCGACAAAGTCTCCTGCTATGTATCAGATGATGGTTCAGCAATGCTTACTTTTGAAGCGCTCTCTGAAACTGCAGAGTTTGCAAGGAAGTGGGTGCCTTTTTGCAAGAAGCACAACATTGAACCAAGGGCCCCAGAATTTTATTTTGCTCAAAAGATAGACTACTTGAAGGACAAGATTAAACCTTCTTTCGTAAAAGAGCGTCGGGCAATGAAGAGAGAGTATGAAGAATTCAAGGTTCGGATCAATGCACTTGTTGCCAAAGCACAGAAGATGCCTGAGGAAGGTTGGACCATGCAGGATGGAACGCCATGGCCAGGAAACAATCCCAGGGATCATCCTGGAATGATACAGGTTTTCTTAGGCCACAGTGGAGGTCTCGATACTGATGGCAATGAACTACCCCGACTTGTTTATGTTTCTCGTGAGAAGCGACCAGGCTTCCAGCACCACAAGAAAGCCGGAGCTATGAATGCATTGATCCGAGTTTCTGCCGTGCTTACTAATGGAGCATATCTTTTGAATGTCGATTGTGATCACTACTTCAACAACAGCAAAGCTCTCAAGGAAGCCATGTGTTTCATGATGGACCCTGCTTACGGGAAGAAAACATGTTACGTACAGTTCCCACAACGTTTTGACGGCATTGATTTGCACGATCGATATGCCAATCGCAACATTGTCTTTTTCGACATAAACTTGAAAGGGTTGGATGGCCTCCAGGGTCCTGTCTATGTGGGAACTGGATGCTGTTTCAATCGGCAAGCTTTATATGGTTACGATCCGGTTCTGACCGAAGCTGATTTGGAACCAAATATTATTATTAAGAGTTGTTGTGGTTCAAGAAAGAAGGGCAAGAACAAGAAGTACATTGACAAAAAGAGGGCTGCAAAAAGGACTGAGTCTACTATTCCTATCTTTAACATGGAAGATATCGAGGAAGGTGTTGAAGGATATGATGATGAGAGGTCCCTCCTGATGTCTCAGAAGAGTTTAGAAAAGCGCTTCGGCCAATCTCCAGTTTTTATTGCAGCCACTTTCATGGAACAGGGAGGCATTCCACCTTCAACCAATCCTGCAACCCTTCTAAAGGAAGCAATTCATGTCATCAGTTGTGGGTACGAAGATAAGACAGAATGGGGCAAAGAGATTGGGTGGATCTATGGTTCTGTGACAGAAGATATTTTGACCGGGTTTAAGATGCATGCTCGCGGTTGGATTTCAATTTACTGCATGCCTCCGCGCCCAGCATTCAAGGGATCCGCTCCCATCAATCTTTCCGATCGTCTGAACCAAGTGCTTCGATGGGCTTTGGGTTCCATCGAAATCTTGCTCAGCAGGCATTGTCCTATCTGGTATGGCTACAATGGAAGGCTGAAGCTTTTGGAGAGAATAGCATACATCAATACCATCGTTTACCCTATCACCTCAATTCCACTTATTGCATACTGTATGCTTCCTGCGTTCTGTCTTTTGACCGGAAAGTTCATCATTCCTGAGATAAGTAACTTTGCCAGTATGTGGTTCATTCTCCTTTTCGTCTCCATTTTCGCAACTGGTATTCTTGAACTTAGATGGAGTGGTGTTAGCATTGAAGACTGGTGGAGAAACGAACAATTTTGGGTCATTGGTGGTACTTCAGCTCATCTGTTTGCCGTCTTCCAAGGTCTCTTAAAGGTTCTTGCTGGAATCGATACCAACTTCACTGTCACGTCAAAGGCCAGCGACGACGATGGGGATTTTGCAGAGCTTTATGTGTTCAAATGGACTTCTCTTCTCATCCCTCCGACCACTGTCCTTATTATGAATATGGTTGGTATAGTGGCAGGTGTTTCATATGCCATTAACAGTGGTTACCAATCTTGGGGTCCTCTCTTTGGTAAGCTGTTCTTTGCATTGTGGGTCATTGTCCATTTATATCCTTTCCTAAAGGGTTTGCTGGGAAGGCAAAATCGTACGCCTACCATTGTCATCGTCTGGTCCATTCTCCTTGCTTCGATATTCTCCTTGCTCTGGGTGCGAATCGATCCGTTCACCTCAGCCTCAACAAAGGCTGCCAATGGTCAATGTGGTATCAATTGTTAG | 3249 | 45.34 | MEANAGLVAGSYKRNELVRIRHDSDSGPKPLKNINSQTCQICGDTVGLTASGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVDDIENEFNYIQGSSKTKRQWHGEDAELSTSARHESQQPIPLLTNGQSVSGEIPCATPDNQSVRTTSGPLGPPEKHMHSHPYVDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMMQMTSRYTEGKGDMEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRLTHPVKNAYPLWLTSVICEVWFALSWLLDQFPKWSPVNRETFLERLALRYDREGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIKPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGLQGPVYVGTGCCFNRQALYGYDPVLTEADLEPNIIIKSCCGSRKKGKNKKYIDKKRAAKRTESTIPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLIAYCMLPAFCLLTGKFIIPEISNFASMWFILLFVSIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIMNMVGIVAGVSYAINSGYQSWGPLFGKLFFALWVIVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSASTKAANGQCGINC | 1082 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 101479751 | 101486333 | - | Tan0020764.1 | Tan01g3661 | 741085 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3661 | 1082 | Coils | Coil | 456 | 476 | - | - | |
Tan01g3661 | 1082 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 112 | IPR013083 | - | |
Tan01g3661 | 1082 | Pfam | Zinc-binding RING-finger | 29 | 106 | IPR027934 | - | |
Tan01g3661 | 1082 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 376 | 650 | IPR029044 | - | |
Tan01g3661 | 1082 | Pfam | Cellulose synthase | 358 | 1073 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Tan01g3661 | 1082 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 265 | 1051 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Tan01g3661 | 1082 | CDD | mRING-HC-C4C4_CesA | 37 | 87 | - | - | |
Tan01g3661 | 1082 | FunFam | Cellulose synthase | 21 | 112 | - | - | |
Tan01g3661 | 1082 | ProSiteProfiles | Zinc finger RING-type profile. | 39 | 85 | IPR001841 | - | |
Tan01g3661 | 1082 | FunFam | Cellulose synthase | 475 | 649 | - | - | |
Tan01g3661 | 1082 | SUPERFAMILY | RING/U-box | 22 | 111 | - | - | |
Tan01g3661 | 1082 | MobiDBLite | consensus disorder prediction | 74 | 143 | - | - | |
Tan01g3661 | 1082 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 346 | 446 | IPR029044 | - | |
Tan01g3661 | 1082 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 516 | 653 | IPR029044 | - | |
Tan01g3661 | 1082 | MobiDBLite | consensus disorder prediction | 161 | 193 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3661 | Tan-Chr1:101479751 | Tan06g0578 | Tan-Chr6:4432734 | 0.00E+00 | dispersed | |
Tan01g3661 | Tan-Chr1:101479751 | Tan05g0894 | Tan-Chr5:7188981 | 1.10E-107 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3661 | K10999 | - | csv:101205724 | 2193.7 |