Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3674 | ATGTCCGGCTCGAACATGGCGGAAGATCTACGCTCTTGGTCCCACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCCGCCTGGGGGATTTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATCAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGTGTGATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAAACAAAACTGGAGAGTGTTCCAGCATCTAAAATCTATGCTCCTGAGTCTCTAAGAGCAGGATATTCAATTTTTGCCTCTGGGATTATTGTGGGCTTTGCCAACCTGGTTTGCGGGTTTGATCCTTCATCTTAA | 396 | 49.75 | MSGSNMAEDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGFANLVCGFDPSS | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 101590923 | 101593097 | - | Tan0019082.2 | Tan01g3674 | 741098 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3674 | 131 | Pfam | ATP synthase subunit C | 29 | 87 | IPR002379 | GO:0015078(InterPro)|GO:0033177(InterPro)|GO:1902600(InterPro) | |
Tan01g3674 | 131 | SUPERFAMILY | F1F0 ATP synthase subunit C | 21 | 90 | IPR035921 | - | |
Tan01g3674 | 131 | CDD | ATP-synt_Vo_c_ATP6F_rpt1 | 25 | 87 | - | - | |
Tan01g3674 | 131 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 12 | 127 | - | GO:0016021(PANTHER) | |
Tan01g3674 | 131 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 39 | 65 | IPR000245 | GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Tan01g3674 | 131 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 66 | 89 | IPR000245 | GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Tan01g3674 | 131 | Gene3D | - | 23 | 129 | IPR035921 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3674 | Tan-Chr1:101590923 | Tan02g2689 | Tan-Chr2:95206854 | 8.20E-53 | dispersed | |
Tan01g3673 | Tan-Chr1:101590923 | Tan01g3674 | Tan-Chr1:101590923 | 2.70E-62 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3674 | K03661 | - | cit:102611677 | 214.927 |