Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3719 | ATGCCTCGTAAGGTGAGCCACGGGTTGGATTATGACGAAGATTACGACGAGTACGACGATTATGATTACTACGATAGCGATTTCGACGTAGAAGACAAAGAAAAAACACATGGGGCTAAGGAAGAAACAAAGGGACATAAGCTTTGGCGATGTCCAATTTGCACTTATGACAATGAAGACAGTTTTTCTGCGTGCGATATATGTGGGGTTCTGCGCAACCCTTTGGTCAACGACAGCAAAACTCGTCATGACAAAACAGTCGGCCATAAAGACTTCAACTCTTCAGTATTATCTTCAGACATCACTAATGAAGGTGCAAATAATGCAGCATTGACTTCAAAAAGTGCATATGATTCGTCTGCTGTATTGTCAAAGGGCAAAAAAAGTACAGTGGTCATTGAAGACCATAATATGTCAATTAGTGTTACAAAAAATTTACAATCCCGTGATAACAGGCCATCAATCACTTCCACATCAAAGTCAGCTGGAAAATTTGACAGCCTGGATGAGAGCAGTAACCCTCCTGTGGAACGGGAAAAGCCACAGAGTATTGCCGGTAGTCTGAACAACATGGATCTAAATGTCAAATCTGCCTATGCAAATTATATTAGTGGGTTAGGAAAAACATCAAATGTGCAGTATAAACATGATAAATGGATGCTGCCTGATAAAGTTGTAGATACTTTGACTCAGCTGAATCTTGCTATTGTTGGTCATGTTGATTCTGGAAAATCTACTCTCTCAGGAAGACTTTTGCACCTATTGGGACGTGTATCCCAAAAAGAAATGCACAAATATGAAAAAGAAGCAAAGTCCTTGGGCAAGGGTTCCTTTGCTTATGCCTGGGCACTGGATGAGAGTGCAGAAGAAAGAGAGAGAGGCATAACCATGACTGTCGGTGTTGCTTATTTTGATTCTAAAAGATATCATGTCGTTGTGCTTGATTCACCAGGCCATAAAGATTTTGTTCCAAACATGATATCTGGTGCATCACAAGCCGATGCTGCAGTTCTCGTTATAGATGCATCTGTTGGTGCATTTGAAGCCGGTTTGGACAGTTCAAAGGGGCAAACAAGGGAACATGTGCAATTAATCAGGAGCTTTGGTGTAGATCAGATAATTGTTGCAGTTAACAAAATGGATGTGGTGGAGTATTCCAAAGTCCGCTATGACTTTGTTAAGCAGCAACTTGGAGCATTTTTTCGTTCTTGTGGTTATAAAGATTCATCATTGTCTTGGATTCCATTGAGTGCCATGGCTAATCAAAATCTGGTGAACGCCCCTTCTGATGTTCGATTATTGTCTTGGTATCGTGGACCTAATCTGTTGGAGGCAATTGATTCCCTTCAACCACCCACTAGAGATTTCTCTAAGCCACTGCTTATGCCGATATGCGACGTTGTTAGATCACTTTCACTAGGACAAGTGTCTGCCATTGGCAAACTGGAAGCTGGAGCTCTCCAGTCTGGATCTAAGGTTCTAGTCATGCCATCTAGAGATAAAGGTACTGTGCGCACTTTAGAACGTGATTCTCAGGCTTGCAAAATTGCAAGAGCGGGGGACAACGTGACTGTTTGTCTACAAGGAATTGAAGCAAGTAGCGTGATGGCTGGGGGTGTCCTATGCCATCCTGATTTTCCTGTTGCTGTTGCAAAACATTTGGAATTGAAGATTCTCACCTTGGACTTTGCAACTCCGATATTAATCGGATCGCAGTTGGAAATTCATATACACCACGTGAAGGAGGCTGCTAGAGTTGCAAGAATAGTGTCATTGCTCGATTCGAAGACGGGAAAGGTTACGAAGAAGGCACCACGTTGTCTCAGTGCTAAACAAAGTGCAGTGATTGAGGTTGTTTTGCACAGTCCAGTTTGTGTGGAAGCATTCTCAACCAGTCGAGCTCTCGGGCGAGTATTTCTAAGAGCAATGGGCAGAACTATAGCCGTCGGCATTGTGACCCAACTAATCGGAGATCCCGAATAA | 1983 | 42.76 | MPRKVSHGLDYDEDYDEYDDYDYYDSDFDVEDKEKTHGAKEETKGHKLWRCPICTYDNEDSFSACDICGVLRNPLVNDSKTRHDKTVGHKDFNSSVLSSDITNEGANNAALTSKSAYDSSAVLSKGKKSTVVIEDHNMSISVTKNLQSRDNRPSITSTSKSAGKFDSLDESSNPPVEREKPQSIAGSLNNMDLNVKSAYANYISGLGKTSNVQYKHDKWMLPDKVVDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRVSQKEMHKYEKEAKSLGKGSFAYAWALDESAEERERGITMTVGVAYFDSKRYHVVVLDSPGHKDFVPNMISGASQADAAVLVIDASVGAFEAGLDSSKGQTREHVQLIRSFGVDQIIVAVNKMDVVEYSKVRYDFVKQQLGAFFRSCGYKDSSLSWIPLSAMANQNLVNAPSDVRLLSWYRGPNLLEAIDSLQPPTRDFSKPLLMPICDVVRSLSLGQVSAIGKLEAGALQSGSKVLVMPSRDKGTVRTLERDSQACKIARAGDNVTVCLQGIEASSVMAGGVLCHPDFPVAVAKHLELKILTLDFATPILIGSQLEIHIHHVKEAARVARIVSLLDSKTGKVTKKAPRCLSAKQSAVIEVVLHSPVCVEAFSTSRALGRVFLRAMGRTIAVGIVTQLIGDPE | 660 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 101991566 | 101998751 | + | Tan0019659.1 | Tan01g3719 | 741143 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3719 | 660 | PRINTS | GTP-binding elongation factor signature | 373 | 382 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Tan01g3719 | 660 | PRINTS | GTP-binding elongation factor signature | 312 | 322 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Tan01g3719 | 660 | PRINTS | GTP-binding elongation factor signature | 328 | 339 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Tan01g3719 | 660 | PRINTS | GTP-binding elongation factor signature | 292 | 300 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Tan01g3719 | 660 | PRINTS | GTP-binding elongation factor signature | 233 | 246 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Tan01g3719 | 660 | Gene3D | Translation factors | 550 | 657 | - | - | |
Tan01g3719 | 660 | ProSitePatterns | Zinc finger RanBP2-type signature. | 49 | 68 | IPR001876 | - | |
Tan01g3719 | 660 | Gene3D | Translation factors | 457 | 546 | - | - | |
Tan01g3719 | 660 | CDD | EF1_alpha | 233 | 452 | - | - | |
Tan01g3719 | 660 | FunFam | Elongation factor 1 alpha-like protein | 222 | 453 | - | - | |
Tan01g3719 | 660 | Pfam | Elongation factor Tu domain 2 | 478 | 542 | IPR004161 | GO:0005525(InterPro) | |
Tan01g3719 | 660 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 552 | 656 | IPR009001 | - | |
Tan01g3719 | 660 | Pfam | GTP-eEF1A C-terminal domain-like | 554 | 653 | IPR054696 | - | |
Tan01g3719 | 660 | PANTHER | TRANSLATION FACTOR | 230 | 653 | IPR050100 | GO:0003924(PANTHER)|GO:0006412(PANTHER) | |
Tan01g3719 | 660 | SUPERFAMILY | Ran binding protein zinc finger-like | 45 | 72 | IPR036443 | - | |
Tan01g3719 | 660 | Gene3D | - | 221 | 453 | IPR027417 | - | |
Tan01g3719 | 660 | CDD | HBS1_C_III | 547 | 655 | - | - | |
Tan01g3719 | 660 | Pfam | Elongation factor Tu GTP binding domain | 232 | 451 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Tan01g3719 | 660 | FunFam | Translation elongation factor EF-1 | 456 | 546 | - | - | |
Tan01g3719 | 660 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 214 | 463 | IPR027417 | - | |
Tan01g3719 | 660 | MobiDBLite | consensus disorder prediction | 145 | 168 | - | - | |
Tan01g3719 | 660 | SUPERFAMILY | Translation proteins | 451 | 546 | IPR009000 | - | |
Tan01g3719 | 660 | FunFam | elongation factor 1-alpha isoform X4 | 550 | 659 | - | - | |
Tan01g3719 | 660 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 229 | 460 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Tan01g3719 | 660 | MobiDBLite | consensus disorder prediction | 145 | 182 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3719 | Tan-Chr1:101991566 | Tan05g0274 | Tan-Chr5:2073060 | 2.90E-77 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3719 | K14416 | - | csv:101219939 | 970.689 |