Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3729 ATGGCGAACCCTATCTCTCTCCAAGAGATTCGAATCGAGTCCGTTGATCTGGAACGTATTTCAATCGACGAAGTGTTCGAGAAGTTAAAATGCTCGAAAGAAGGTCTCAGTTCAGAGGAAGGAGCCAATCGGCTTCAAGTTTTCGGACCCAACAAACTCGAAGAGATAAAGGAGAGCAAGATTCTGAAATTTCTGGGGTTTATGTGGAATCCTCTCTCGTGGGTCATGGAAGCAGCGGCTATAATGGCTATTGTCTTAGCAAACGGCGGTGGAAGGCCTCCAGACTGGCCGGATTGCGTGGGAGTCATGGCCCTACTTTTAATCAACTCAACCATCAGTTTTTTGGAGGAAAACAACGCAGGAAATGCAGCTGCAGCTCTCATGGCCGGTCTTGCCCCCAAAACTAAGGTTCTCAGAGATGGTCGTTGGAGTGAGCAAGAGGCTGCTATTCTTGTTCCTGGAGATATAATAAGTATCAAATTGGGAGATATAATCCCTGCTGATGCTCGTCTTCTTCAGGGGGACCCTTTGAAGATTGATCAATCTGCTTTAACTGGCGAGTCCCTTCCTGTTACCAAAAACCCTTCAGATGAAGTTTTTTCAGGATCAACTTGTAAACAGGGAGAAATTGAAGCAGTTGTGATTGCCACTGGTGTGCACACCTTCTTTGGCAAAGCTGCTCATTTAGTGGACAGCACCAATCAAGTTGGCCATTTCCAAAAAGTTCTTACTGCCATCGGGAACTTCTGTATTTGCTCCATTGCTATTGGAATTGTTATTGAGATCATAGTCATGTACCCAATTCAACATCGTGCATATAGAGATGGCATTGACAATTTGCTGGTGCTTTTGATTGGAGGAATTCCTATTGCCATGCCCACTGTTTTATCTGTCACCATGGCCATTGGTTCCCACCGACTTTCTAAGCAAGGTGCAATTACCAAGCGGATGACTGCCATTGAGGAGATGGCTGGCATGGATGTCCTCTGCAGTGACAAGACTGGAACATTAACCTTGAATAAGCTTACTGTTGACCAATCCTTGACTGAAGTCTTTGTGGGGGATGTCGATAAAGAACATGTCATCCTTCTTGCAGCAAGGGCTTCTAGAACCGAGAATCAGGATGCCATTGATGCTGCTATTGTTGGAATGTTGGCTGATCCAAAAGAGGCACGAGCTGGTATTAGTGAGGTTCATTTTTTTCCGTTCAATCCTGTAGATAAGAGAACGGCTCTGACTTATATTGATTCTAATGATAACTGGCATCGAGTTAGCAAAGGTGCTCCAGACCAGATCTTAAATCTTTGCCATGCAAACCCAGTCGTCCGGAAACAAGTTCATGGAGTGATTGATAAGTTTGCTGAATGTGGCCTCCGATCTCTAGGTGTTGCTAGACAGAAAGTACCTAAGAGAACTAAAGAAAGTCCAGGAGATCCATGGCAACTTGTTGGGTTGTTAGCTTTGTTTGATCCTCCCAGACATGATAGTGCAGAAACTATCAGAAGGGCTCTAAACCTTGGAGTAAATGTCAAGATGATTACTGGGGACCAACTGGCCATTGCCAAGGAAACCGGTCGGAGACTTGGTATGGGATCAAATATGTACCCTTCTTCTGCATTACTACAAAACACTGGTGCGTCACTTCCCGTGGATGAGTTGATTGAAACAGCGGATGGATTTGCTGGTGTATTTCCAGAACACAAATATGAAATTGCGAGAAGGTTACAAGAGAAGAAACACATATGTGGAATGACCGGAGATGGTGTAAATGATGCGCCTGCACTAAAGAAGGCAGATATTGGAATTGCGGTTGCTGATGCAACTGATGCAGCTCAAAACGCTTCTGATATCGTCCTCACTGAACCAGGATTAAGCGTTATTATCAGTGCAGTTTTGACTAGCAGGGCTATTTTTCAGAGGATGAAGAACTATACAATTTATGCAGTTTCCATCACCATTCGTATAGTGTTTGGTTTTATGTTGATTGCTTTGATTTGGAAGTTTGATTTCGCTCCATTCATGGTTTTAATTATAGCTATTCTAAACGATGGAACCATCATGACGATTTCCAAGGATCGAGTTAAGCCTTCTCCACAGCCTGATAGCTGGAAGTTGAAGGAAATTTTCGCTACTGGCATTGTGTTAGGAGGATACTTGGCATTGATGACCGTGTTATTCTTTTGGATCGTGAGAGACACCGACTTTTTCTCGAACAAGTTTCATGTAGAATCCCTGATGAACAACGACCTGAAAATGATGTCAGCATTGTATCTACAAGTTAGCATCGTGAGTCAAGCCCTTATTTTTGTCACAAGATCTCAAAGTTGGTCATTCGTGGAACGTCCTGGACTTCTCTTAGTGAGCGCTTTCATAGCTGCCCAGCTGGTAGCAACTATGATAGCAGTTTATCTAAACTTGGCTTTTGCAAGGATAAAAGGCATTGGTTGGAGATGGGCTGGTGTTATTTGGCTATATAGTTTTATAACTTACCTCCCTCTTGATATTCTCAAATTTACCATTCGCTATGCTCTCAGTGGAAGGGCCTGGAACAACCTTTTGCAGAATAAGACTGCATTCACAACAAAGAAAGATTATGGGAAGGAAGAGAGAGAAGCACAATGGGCTACCGCACAAAGGACTATCCATGGTCTTCAACCACCTCAAACCAACAATTCTCTTTTTGATAGGAACAATTGTGGAGAGCTTTCTGAGATCGCCGAGCAAGCGAGGCGACGGGCTGAAATTGCAAGGCTCCGTGAGTTGCACACTCTAAAAGGCCGGGTAGAGTCTGTAGTAAAGTTGAAAGGACTCGACATCGATACATTTAATCAACATTACACGGTTTAA 2847 43.66 MANPISLQEIRIESVDLERISIDEVFEKLKCSKEGLSSEEGANRLQVFGPNKLEEIKESKILKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWPDCVGVMALLLINSTISFLEENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLQGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGIVIEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSKQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDQSLTEVFVGDVDKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGISEVHFFPFNPVDKRTALTYIDSNDNWHRVSKGAPDQILNLCHANPVVRKQVHGVIDKFAECGLRSLGVARQKVPKRTKESPGDPWQLVGLLALFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSALLQNTGASLPVDELIETADGFAGVFPEHKYEIARRLQEKKHICGMTGDGVNDAPALKKADIGIAVADATDAAQNASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIVLGGYLALMTVLFFWIVRDTDFFSNKFHVESLMNNDLKMMSALYLQVSIVSQALIFVTRSQSWSFVERPGLLLVSAFIAAQLVATMIAVYLNLAFARIKGIGWRWAGVIWLYSFITYLPLDILKFTIRYALSGRAWNNLLQNKTAFTTKKDYGKEEREAQWATAQRTIHGLQPPQTNNSLFDRNNCGELSEIAEQARRRAEIARLRELHTLKGRVESVVKLKGLDIDTFNQHYTV 948
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 102044889 102049785 + Tan0016935.1 Tan01g3729 741153
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3729 948 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
Tan01g3729 948 Gene3D - 133 217 - -
Tan01g3729 948 FunFam Plasma membrane ATPase 481 633 - -
Tan01g3729 948 Pfam haloacid dehalogenase-like hydrolase 326 599 - -
Tan01g3729 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 332 338 IPR018303 -
Tan01g3729 948 PRINTS H+-transporting ATPase (proton pump) signature 616 641 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3729 948 PRINTS H+-transporting ATPase (proton pump) signature 757 778 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3729 948 PRINTS H+-transporting ATPase (proton pump) signature 557 573 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3729 948 PRINTS H+-transporting ATPase (proton pump) signature 446 464 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3729 948 PRINTS H+-transporting ATPase (proton pump) signature 585 601 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3729 948 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Tan01g3729 948 NCBIfam HAD-IC family P-type ATPase 103 349 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3729 948 NCBIfam HAD-IC family P-type ATPase 560 675 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3729 948 SUPERFAMILY HAD-like 326 632 IPR036412 -
Tan01g3729 948 FunFam Plasma membrane ATPase 133 217 - -
Tan01g3729 948 Pfam E1-E2 ATPase 132 310 - -
Tan01g3729 948 SFLD C1.7: P-type atpase like 312 636 - -
Tan01g3729 948 PRINTS P-type cation-transporting ATPase superfamily signature 608 620 - -
Tan01g3729 948 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Tan01g3729 948 PRINTS P-type cation-transporting ATPase superfamily signature 180 194 - -
Tan01g3729 948 PRINTS P-type cation-transporting ATPase superfamily signature 484 495 - -
Tan01g3729 948 PRINTS P-type cation-transporting ATPase superfamily signature 506 516 - -
Tan01g3729 948 PRINTS P-type cation-transporting ATPase superfamily signature 585 604 - -
Tan01g3729 948 Gene3D - 95 812 - -
Tan01g3729 948 Gene3D - 898 948 - -
Tan01g3729 948 PANTHER CALCIUM-TRANSPORTING ATPASE 18 872 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Tan01g3729 948 CDD P-type_ATPase_H 35 838 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Tan01g3729 948 FunFam Plasma membrane ATPase 342 489 - -
Tan01g3729 948 NCBIfam plasma-membrane proton-efflux P-type ATPase 35 803 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Tan01g3729 948 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 844 IPR023298 -
Tan01g3729 948 SFLD p-type atpase 312 636 IPR044492 -
Tan01g3729 948 Gene3D - 327 622 IPR023214 -
Tan01g3729 948 FunFam ATPase 4 plasma membrane-type 575 812 - -
Tan01g3729 948 Gene3D - 342 489 IPR023299 GO:0000166(InterPro)
Tan01g3729 948 SUPERFAMILY Calcium ATPase, transduction domain A 133 230 IPR008250 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3729 Tan-Chr1:102044889 Tan09g1707 Tan-Chr9:68623716 0.00E+00 dispersed
Tan01g3729 Tan-Chr1:102044889 Tan01g3730 Tan-Chr1:102062980 0.00E+00 tandem
Tan01g3729 Tan-Chr1:102044889 Tan02g2635 Tan-Chr2:94782070 0.00E+00 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3729 K01535 - csv:101219224 1596.25