Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3731 ATGGCGAATCCTATCACTCTCCAAGAAATTCGAAGCGAGTCCGTTGATTTGGAACGTATTCCAATCGGCGAAGTGTTCGAGAAGTTAAAATGCTCAAAAGAAGGTCTCAGTTCAGAGGAAGGAGCCAATCGGCTTCAAGTTTTCGGACCCAACAAACTGGAAGAGAAAAAGGAGAGCAAGATTCTGAAATTTCTGGGGTTTATGTGGAATCCTCTCTCGTGGGTCATGGAAGCAGCGGCTATAATGGCTATTGTCTTAGCAAACGGCGGTGGAAGGCCTCCAGACTGGCCGGATTGCGTGGGAGTCATGGCCTTACTTTTAATCAACTCAACCATCAGTTTTTTGGAGGAAAACAACGCAGGAAATGCAGCTGCAGCTCTTATGGCTGGTCTTGCTCCCAAAACTAAGTCCCTTCCTGTTACCAAAAACCCTTCAGATGAAGTTTTTTCAGGATCAACTTGTAAACAGGGAGAAATTGAAGCAGTTGTGATTGCCACTGGTGTGCACACCTTCTTTGGCAAAGCTGCTCATTTAGTGGACAGCACCAATCAAGTTGGCCATTTCCAAAAAGTTCTTACTGCACGAGCTGTTATTAGTGAGGTTCATTTTTTTCCGTTCAATCCTGTAGATAAGAGAACGACTCTGACTTATATTGATTCTAATGATAATAACTGGCATCGAGTTAGCAAAGGTGCTCCAGAGCAGGTAAAGCTGTTTTTTCTTAATCTTAAATCTTGCAATTCAAACCAAGTCGTTAGGAAACAAGTTCATGGAGTAATTAATAAGTTCGCTGAATGTGGACTTCGATCCTTGGGGTTGCTAGACAGGTTTTTAAATAAAGTACCTGAGAGAATCAAAGAAAGTCCACGAGATCCATGGCAACTTGTTGGGTTATTAGCGCTGTTTGATCCTCCCAGACATGACAGTGCAGAAACCATCAGAAGAGCTCTGAACCTTGGAGTAAATGTTAAGATGATTACTCATTTGAATGATTCCTTAAATATAGGGGACCAACTGGCCATTGTCAAGGAAACCGGTCGGAAACTTGGTATAGGATCAAATATGTACCCTTCTTCTGCATTACTACAAACCAGGGGTGCATCAACAGTTACTCTTCCCTTAGATGAGTTGATTAAAACAGCTGATGAATTTGCTGGTGTATTTCCAGAACACAAATATGAAATTGTGAGAAAATTACAAGAGAAGAAACACATTTGTGGAATGACTGGAGATGGTGTAAATGATGCCTCTGCACTAAAGAATGCATATATTGGAATTGTTGATGCATATATTGGAATTGTTGTTGCTGATTCAACTGATGCAGCTCAGAACGCATCTGATATCATCCTCACTGAACTGGGATTAAGCGTTATTATCAGTGCAGTTCTGACCAGCAGGGCTATTTTCCAGAGGATGAAGAATTATACGATTTATGCAGTTTTCATCACCATTCGGATAGTGTTTGGTTTTCTGTTGATTGCTTTGATTTGGAGATTTGATTTTGCTCCTTTCATGGTTTTAATTATAGCTATTCTAAATGATGGAACAATCATGACCATTTCCAAGGATCGAGTTAAGCCTTCTCCACTTACTGATAGCTGGAAGTTGAAGGAAATTTTCGCTACTGGCATTGTGTTAGGAGGATACTTGGCACTGATGACCGTGTTATTCTTCTGGATCATGATAGCCACCGACTTTTTCTCGAACAAGTTTCACGTAGAATCCCTGAGGAACAACCCGAGAATGATGTCAGCATTGTATCTACAAGTTAGTATCGTGAGTCAAGCCCTTATTTTCGTCACAAGGTCTCGAAGTTGGTCGTTCGTCCAACGTCCTGGACTTCTCTTAGTGAGCGCTTTCATAGCTGCCCAGCTGGTAGCAACTATGATAGCAGTGTATGCAAATGGGGGTTTTGCAAGGATAAAAGACATTGGTTGGAGATGGGCTGGTGTGATCTGGCTATACAGTTTTATAACTTACATCCCTCTTGATATTCTCAAATTTACCATTCGCTATGTTCTCAGTGGAAGGGACCTTTTTTGTTGTTTCTGTAAAGATTATGGGAAAGAAGAGAGAGAAGCACAGTGGGCTACCACACAAAGGACTATTCATGGTCTTCAACCATCTCAAACCAACAACTCTCTTTCTGATAGGAACAGTTGTGGAATGAATTGTCGAGTGGAATCCGTAGTGAAGTTAAAAGGACTCGACATCGATACAATTAATCGACATTACACGGTTTAA 2244 41.31 MANPITLQEIRSESVDLERIPIGEVFEKLKCSKEGLSSEEGANRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWPDCVGVMALLLINSTISFLEENNAGNAAAALMAGLAPKTKSLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTARAVISEVHFFPFNPVDKRTTLTYIDSNDNNWHRVSKGAPEQVKLFFLNLKSCNSNQVVRKQVHGVINKFAECGLRSLGLLDRFLNKVPERIKESPRDPWQLVGLLALFDPPRHDSAETIRRALNLGVNVKMITHLNDSLNIGDQLAIVKETGRKLGIGSNMYPSSALLQTRGASTVTLPLDELIKTADEFAGVFPEHKYEIVRKLQEKKHICGMTGDGVNDASALKNAYIGIVDAYIGIVVADSTDAAQNASDIILTELGLSVIISAVLTSRAIFQRMKNYTIYAVFITIRIVFGFLLIALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLTDSWKLKEIFATGIVLGGYLALMTVLFFWIMIATDFFSNKFHVESLRNNPRMMSALYLQVSIVSQALIFVTRSRSWSFVQRPGLLLVSAFIAAQLVATMIAVYANGGFARIKDIGWRWAGVIWLYSFITYIPLDILKFTIRYVLSGRDLFCCFCKDYGKEEREAQWATTQRTIHGLQPSQTNNSLSDRNSCGMNCRVESVVKLKGLDIDTINRHYTV 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 102081105 102085880 + Tan0014678.1 Tan01g3731 741155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3731 747 PRINTS P-type cation-transporting ATPase superfamily signature 297 308 - -
Tan01g3731 747 PRINTS P-type cation-transporting ATPase superfamily signature 319 329 - -
Tan01g3731 747 PRINTS P-type cation-transporting ATPase superfamily signature 409 428 - -
Tan01g3731 747 NCBIfam HAD-IC family P-type ATPase 384 506 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3731 747 Gene3D - 140 182 - -
Tan01g3731 747 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 674 IPR023298 -
Tan01g3731 747 PANTHER CALCIUM-TRANSPORTING ATPASE 136 194 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Tan01g3731 747 Gene3D - 303 453 IPR023214 -
Tan01g3731 747 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
Tan01g3731 747 Pfam haloacid dehalogenase-like hydrolase 291 422 - -
Tan01g3731 747 Pfam E1-E2 ATPase 137 190 - -
Tan01g3731 747 FunFam ATPase 4 plasma membrane-type 396 642 - -
Tan01g3731 747 PRINTS H+-transporting ATPase (proton pump) signature 409 425 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3731 747 PRINTS H+-transporting ATPase (proton pump) signature 587 608 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3731 747 PRINTS H+-transporting ATPase (proton pump) signature 256 274 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan01g3731 747 Pfam Cation transporter/ATPase, N-terminus 20 82 IPR004014 -
Tan01g3731 747 Gene3D - 718 747 - -
Tan01g3731 747 FunFam Plasma membrane ATPase 294 464 - -
Tan01g3731 747 SUPERFAMILY Calcium ATPase, transduction domain A 137 179 IPR008250 -
Tan01g3731 747 Gene3D - 192 302 IPR023299 GO:0000166(InterPro)
Tan01g3731 747 SUPERFAMILY HAD-like 253 463 IPR036412 -
Tan01g3731 747 Gene3D - 67 139 - -
Tan01g3731 747 Gene3D - 454 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3731 Tan-Chr1:102081105 Tan09g1707 Tan-Chr9:68623716 3.60E-286 dispersed
Tan01g3730 Tan-Chr1:102062980 Tan01g3731 Tan-Chr1:102081105 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3731 K01535 - csv:101219224 797.734