Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3732 ATGAAAATCCAAACCTTTCATTTTCTCCCCTTCTTTCTTCTTCTTCTTCTTCTCTCAACTTGCTGTTTTGCTGAGCTTCATCTCAACTATTACCATAATTCATGTCCTAATGTTGAGTCCATTGTAAGAGCTGCTGTGAAACAGAAATTTGAACAGACTTTTGTTACTGCCCCTGCCACTCTCAGACTCTTTTTTCATGATTGTTTTGTCAGGGGCTGTGATGCTTCTGTCCTGCTTCATTCAAATAATCACACTTCTGAGAAAGACAATGCTGAGAATCTTTCGCTCGCCGGAGACGGGTTCGACACCGTGATCAAAGCTAAGGCCGCTGTCGATAGCGTGCCAGAGTGTAAGAACAAGGTCTCTTGTGCTGACATATTGGCTTTGGCTACTAGAGATGTTGTAGTTTTGACAGGAGGACCGTTGTATGCCGTGGAATTGGGAAGGCGAGACGGGCAGATCTCGACACGAAAGAGCGTTCGACACCATCTTCCTTTACCTGATTTTGGATTAGATCAGCTCAATGCCATGTTTGCAAGACATGGTCTAACTCAAACAGACATGATTGCACTCTCAGGTGCACATACAATTGGATTCTCACACTGCAAGCACTTCTCCAAAAGGCTATATAGCTTCCACAGCAAAAACCGAATCGACCCGACGTTCAATCCGACATACGTGAACGAGCTCAAGAGAGAATGCCCGAGAAACGTCGACCAAAGAATCGCCGTCGATATGGACTCGACGTCGTCGTTCACATTCGACAACATGTACTTCAAGAATCTGCAGATGGGAAAAGGGTTGTTCAGCTCAGACCAAGTGTTGTTCACTGATCCAAGATCAAGAAAAACAGTGAACTTATTTGCTTCCAACAACTCAGCTTTTGAGAAGGCTTTTGTGGTTGCAATGACAAAGCTTGGGAGAGTGGGAGTCAAAACAAGAAACCAAGGGGAGATCAGAATTGACTGTTCTTCAGTTAACTAA 984 44.31 MKIQTFHFLPFFLLLLLLSTCCFAELHLNYYHNSCPNVESIVRAAVKQKFEQTFVTAPATLRLFFHDCFVRGCDASVLLHSNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPECKNKVSCADILALATRDVVVLTGGPLYAVELGRRDGQISTRKSVRHHLPLPDFGLDQLNAMFARHGLTQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPTYVNELKRECPRNVDQRIAVDMDSTSSFTFDNMYFKNLQMGKGLFSSDQVLFTDPRSRKTVNLFASNNSAFEKAFVVAMTKLGRVGVKTRNQGEIRIDCSSVN 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 102087098 102088694 - Tan0001992.1 Tan01g3732 741156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3732 327 FunFam Peroxidase 29 172 - -
Tan01g3732 327 Gene3D - 29 327 - -
Tan01g3732 327 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan01g3732 327 FunFam Peroxidase 165 306 - -
Tan01g3732 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Tan01g3732 327 Pfam Peroxidase 42 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Tan01g3732 327 Gene3D Peroxidase, domain 2 165 306 - -
Tan01g3732 327 PANTHER - 12 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g3732 327 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3732 Tan-Chr1:102087098 Tan03g1646 Tan-Chr3:72558800 1.10E-111 dispersed
Tan01g3732 Tan-Chr1:102087098 Tan05g2038 Tan-Chr5:70579068 1.50E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3732 K00430 - csv:101218982 597.816