Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3739 ATGGCGGTCGATCTTATCAGTTTTCCAAAGATGGATGATCAGATTGCTATACAGGAGGCTGCATCGCAAGGATTGAAGAGTATGGAGCATCTCATTCGTCTTCTTTCTCACAAGCAACCTTCAAACCATGTCGATTGCTCTGACCTAACTGATGCAACCGTTTCCAAGTTCAAGAAAGTGATCTCTCTTCTCAATCGCACCGGCCACGCCAGGTTTCGGCGAGGTCCGGTTTCTAATTCGACCTCCTCCTCGTCGTCCGGTTCAGTTCCTCAAAATCAGGCGATGAATCTCACTCCTACTCCGTTTACTTCACCGGCGACGGTTTCTGCTCCGCCGTTCACCGCTCCGGCCACCGTCGCTCAGTCACATGCGAAGGTTGCTGCGGCGGCGAGCTTTCTCCAGTCGCAGCCACAGAGTATGACTCTCGATTTCACCAGGCCGAATATTTTGAACTCTAACCCTAAGGGAACCGATTTGGAATTCTCTAAGGAGACCTTCAGCGTCTCTTCGAGTTCCTCGTTTATGTCCTCTGCCATCACCGGAGACGGCAGCGTGTCCAATGGAAAATTAGGAACGTCGATCTTTTTGGCACCGACGCCATCTGCTTCCGGCGGAAAGCCGCCGCTCTCGGCGGCGCCATACAAGAAGAGATGCCACGAACACGATCATTCCGAAGATTTGTCCGGAAAATTCTCCGGTTCTACCTCTGCTTCCGGAAAATGCCATTGCTCAAAGAGAAGGAAAAATCGTATGAAGAAGACGATCCGAGTCCCGGCGATTAGTTCAAAAATCGCCGATATTCCACCGGACGAATACTCGTGGAGGAAGTACGGTCAGAAGCCGATTAAGGGATCTCCATACCCAAGGGGATATTACAAGTGTAGCACGGTGAGGGGATGTCCGGCGAGGAAACACGTGGAGAGAGATCCGAACGATCCGGCGATGTTGATTGTAACGTACGAAGGGGAGCACCGCCATACGCAAAGCTCGTTGCCGGAAAATATGGCCGCCGGAGTAGCTTTAGTTTTTGAGTCAACTTGA 1041 51.49 MAVDLISFPKMDDQIAIQEAASQGLKSMEHLIRLLSHKQPSNHVDCSDLTDATVSKFKKVISLLNRTGHARFRRGPVSNSTSSSSSGSVPQNQAMNLTPTPFTSPATVSAPPFTAPATVAQSHAKVAAAASFLQSQPQSMTLDFTRPNILNSNPKGTDLEFSKETFSVSSSSSFMSSAITGDGSVSNGKLGTSIFLAPTPSASGGKPPLSAAPYKKRCHEHDHSEDLSGKFSGSTSASGKCHCSKRRKNRMKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERDPNDPAMLIVTYEGEHRHTQSSLPENMAAGVALVFEST 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 102159890 102162088 - Tan0003663.1 Tan01g3739 741163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3739 346 SUPERFAMILY WRKY DNA-binding domain 266 328 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g3739 346 MobiDBLite consensus disorder prediction 74 98 - -
Tan01g3739 346 Pfam WRKY DNA -binding domain 270 326 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g3739 346 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g3739 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 329 IPR044810 GO:0003700(InterPro)
Tan01g3739 346 Gene3D WRKY domain 247 321 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g3739 346 SMART WRKY_cls 268 328 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g3739 346 MobiDBLite consensus disorder prediction 72 98 - -
Tan01g3739 346 FunFam WRKY transcription factor 65 252 329 - -
Tan01g3739 346 Pfam Plant zinc cluster domain 215 266 IPR018872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3739 Tan-Chr1:102159890 Tan09g1752 Tan-Chr9:69067801 4.60E-79 dispersed
Tan01g3739 Tan-Chr1:102159890 Tan01g4742 Tan-Chr1:113264247 1.30E-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26517 PF03106 WRKY 1.10E-25 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3739 - - - 0.0