Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3762 ATGGATTCAAAGAAGTCGAACAAAATCAGAGACATCGTAAGGCTTCAACAGATCATCAAGAAGTGGCGAAAGCTAGCGAACTCATCAAAGACGGCGAACAAACTCTCCGGCGCGGCGGCGGGACCGGCTGGAAAGAGCATAAAGTTTCTGAAGCGAACGCTGTCGGCCGGCCGCGACGGCTCCGGCGCCGCCGTGCCGAAAGGCTACTTGGCAGTGAGCGTCGGCGAGGAGCAGAAGCGGTTTGTGATTCCGACGCAGTACTTACGGCATCCGGCGTTTGAGATTCTGCTGAGAGAAGCGGAGGAGGAGTTTGGATTTCAGCAAACGGGAGTTTTGAGGCTTCCGTGCGAGGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGAAGAAGAAGGGCGATTTGTTTGGAGGAGATGAGGTTTTGAGTCTTTGTTCGTTGGAATCGCTGCAGCTTACACCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG 495 53.74 MDSKKSNKIRDIVRLQQIIKKWRKLANSSKTANKLSGAAAGPAGKSIKFLKRTLSAGRDGSGAAVPKGYLAVSVGEEQKRFVIPTQYLRHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEKKKGDLFGGDEVLSLCSLESLQLTPSHRPQSPMCR 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 102422479 102423020 - Tan0020719.1 Tan01g3762 741186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3762 164 Pfam Auxin responsive protein 14 127 IPR003676 GO:0009733(InterPro)
Tan01g3762 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 127 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3762 Tan-Chr1:102422479 Tan11g2226 Tan-Chr11:61917934 1.80E-17 dispersed
Tan01g3762 Tan-Chr1:102422479 Tan01g4998 Tan-Chr1:115725605 2.40E-17 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3762 K14488 - csv:101216710 266.929