Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3788 ATGGCGAAAGAAAGAGAACTGCTCGTTTACTCTGCTAGATTGGCAGAGCAGGCTGAGAGATATGAAGAGATGGTTGAGGAAATGAAGAAAGTTGCAAAGTTAAATGTGGAATTGACTGTCGAAGAGAGAAATCTGCTGTCTGTTGGCTATAAGAATGTAATAGGAGCTAGACGAGCTTCATGGCGTATTTTGTCTTCAATTGAACAGAAGGAGATTGCCAAACATAATGAGAAGAATGTGGAACGGATAATTGAGTACAGGCATCGGGTTGAAGATGAACTCTCTAAAATATGCAGTGACATATTGTCAATTGTTGACCAGCATCTCCTTCCAAGTTCCTCTGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGATTATTGTCGGTATTTGGCTGAGTTTAAATCTGGCGATGAGCGTAAACAAGTTGCAGATCAGTCTTTAAAGGCTTACGAGGTTGCTTCTACTATTGCTAACTCCGATTTGCCTCCAACTCATCCTATAAGACTTGGCTTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATTTTGAATTCCCCTGAAAGGGCTTGCCACCTTGCCAAGCACGCCTTTGATGAGGCAATTGCAGAACTTGACAGTCTCAATGAAGATTCCTACAAGGACAGTACCCTCATCATGCAGCTTCTCAGGGACAATCTAACCCTGTGGACTTCCGATCTGCCGGAAGAAGGAGAGCAATCCAATGCTGATGAACTTTAG 747 42.57 MAKERELLVYSARLAEQAERYEEMVEEMKKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEIAKHNEKNVERIIEYRHRVEDELSKICSDILSIVDQHLLPSSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKAYEVASTIANSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKHAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPEEGEQSNADEL 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 102710782 102714200 - Tan0013849.1 Tan01g3788 741212

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3788 248 PIRSF 14-3-3 1 246 IPR000308 -
Tan01g3788 248 Coils Coil 11 34 - -
Tan01g3788 248 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Tan01g3788 248 Gene3D - 1 246 IPR036815 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Tan01g3788 248 Pfam 14-3-3 protein 12 233 IPR023410 -
Tan01g3788 248 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Tan01g3788 248 SMART 1433_4 5 246 IPR023410 -
Tan01g3788 248 FunFam 14-3-3 protein epsilon 1 246 - -
Tan01g3788 248 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Tan01g3788 248 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3788 K06630 - - csv:101213169 431.795
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3788 Tan-Chr1:102710782 Tan02g0163 Tan-Chr2:1433095 4.20E-106 dispersed
Tan01g3788 Tan-Chr1:102710782 Tan02g2393 Tan-Chr2:92527255 2.80E-110 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan02g2410 . 4 242 14-3-3 family AT4G09000 90.4 1.6e-118 423.3
Tan01g3801 . 5 242 14-3-3 family AT4G09000 89.9 8.0e-118 421.0
Tan04g1848 . 6 241 14-3-3 family AT4G09000 86.4 5.0e-112 401.7
Tan04g1849 . 6 241 14-3-3 family AT4G09000 86.4 5.0e-112 401.7
Tan02g2500 . 10 246 14-3-3 family AT4G09000 74.3 5.4e-98 355.1
Tan02g0163 . 4 238 14-3-3 family AT4G09000 72.2 5.2e-93 338.6
Tan04g1015 . 4 239 14-3-3 family AT4G09000 72.3 1.7e-91 333.6
Tan02g2268 . 4 239 14-3-3 family AT4G09000 71.8 1.1e-90 330.9
Tan02g2269 . 4 239 14-3-3 family AT4G09000 71.8 1.1e-90 330.9
Tan02g2393 . 5 236 14-3-3 family AT4G09000 70.5 7.0e-90 328.2
Tan01g3788 . 5 236 14-3-3 family AT4G09000 71.8 6.6e-88 321.6
Tan02g0162 . 1 213 14-3-3 family AT4G09000 72.1 4.4e-84 308.9
Tan02g0164 . 1 213 14-3-3 family AT4G09000 72.1 4.4e-84 308.9
Tan02g2410 . 6 261 14-3-3 family AT1G78300 89.5 3.6e-124 441.8
Tan01g3801 . 5 258 14-3-3 family AT1G78300 90.2 7.9e-124 440.7
Tan04g1848 . 6 253 14-3-3 family AT1G78300 87.5 3.2e-117 418.7
Tan04g1849 . 6 253 14-3-3 family AT1G78300 87.5 3.2e-117 418.7
Tan02g2500 . 11 247 14-3-3 family AT1G78300 75.5 1.0e-99 360.5
Tan02g0163 . 7 255 14-3-3 family AT1G78300 70.1 2.9e-94 342.4
Tan04g1015 . 8 255 14-3-3 family AT1G78300 71.2 4.2e-93 338.6
Tan02g2268 . 8 257 14-3-3 family AT1G78300 70.2 2.8e-92 335.9
Tan02g2393 . 1 250 14-3-3 family AT1G78300 68.3 2.8e-92 335.9
Tan02g2269 . 8 242 14-3-3 family AT1G78300 72.6 2.0e-90 329.7
Tan01g3788 . 1 248 14-3-3 family AT1G78300 68.4 2.4e-88 322.8
Tan02g0162 . 14 230 14-3-3 family AT1G78300 71.0 2.5e-85 312.8
Tan02g0164 . 14 230 14-3-3 family AT1G78300 71.0 2.5e-85 312.8
Tan04g1848 . 6 259 14-3-3 family AT5G38480 90.2 3.0e-123 438.7
Tan04g1849 . 6 259 14-3-3 family AT5G38480 90.2 3.0e-123 438.7
Tan02g2410 . 6 252 14-3-3 family AT5G38480 86.2 3.9e-115 411.8
Tan01g3801 . 6 252 14-3-3 family AT5G38480 85.0 3.3e-114 408.7
Tan02g2500 . 10 251 14-3-3 family AT5G38480 74.4 2.1e-97 352.8
Tan04g1015 . 8 255 14-3-3 family AT5G38480 73.2 4.9e-94 341.7
Tan02g2393 . 5 247 14-3-3 family AT5G38480 72.7 2.4e-93 339.3
Tan02g0163 . 7 247 14-3-3 family AT5G38480 72.4 4.2e-93 338.6
Tan02g2268 . 8 245 14-3-3 family AT5G38480 73.8 1.6e-92 336.7
Tan02g2269 . 8 243 14-3-3 family AT5G38480 73.9 4.6e-92 335.1
Tan01g3788 . 5 242 14-3-3 family AT5G38480 71.7 4.0e-88 322.0
Tan02g0162 . 1 222 14-3-3 family AT5G38480 71.9 1.9e-85 313.2
Tan02g0164 . 1 222 14-3-3 family AT5G38480 71.9 1.9e-85 313.2
Tan02g2410 . 3 242 14-3-3 family AT1G35160 90.4 5.1e-119 424.9
Tan01g3801 . 4 242 14-3-3 family AT1G35160 89.5 4.3e-118 421.8
Tan04g1848 . 6 240 14-3-3 family AT1G35160 86.4 2.3e-111 399.4
Tan04g1849 . 6 240 14-3-3 family AT1G35160 86.4 2.3e-111 399.4
Tan02g2500 . 1 246 14-3-3 family AT1G35160 73.6 1.0e-98 357.5
Tan02g0163 . 2 237 14-3-3 family AT1G35160 71.8 1.4e-92 337.0
Tan04g1015 . 8 239 14-3-3 family AT1G35160 73.5 9.1e-92 334.3
Tan02g2268 . 8 239 14-3-3 family AT1G35160 72.6 1.7e-90 330.1
Tan02g2269 . 8 239 14-3-3 family AT1G35160 72.6 1.7e-90 330.1
Tan02g2393 . 5 236 14-3-3 family AT1G35160 70.1 6.5e-90 328.2
Tan01g3788 . 5 236 14-3-3 family AT1G35160 71.8 8.0e-88 321.2
Tan02g0162 . 1 212 14-3-3 family AT1G35160 71.0 7.7e-83 304.7
Tan02g0164 . 1 212 14-3-3 family AT1G35160 71.0 7.7e-83 304.7
Tan04g1848 . 5 254 14-3-3 family AT5G16050 86.0 1.3e-116 416.8
Tan04g1849 . 5 254 14-3-3 family AT5G16050 86.0 1.3e-116 416.8
Tan02g2410 . 3 253 14-3-3 family AT5G16050 78.9 2.8e-108 389.0
Tan01g3801 . 4 254 14-3-3 family AT5G16050 79.0 1.7e-105 379.8
Tan02g2500 . 10 248 14-3-3 family AT5G16050 71.1 4.9e-92 335.1
Tan02g0163 . 1 246 14-3-3 family AT5G16050 65.5 7.5e-85 311.2
Tan02g2268 . 3 246 14-3-3 family AT5G16050 65.9 9.8e-85 310.8
Tan04g1015 . 3 246 14-3-3 family AT5G16050 65.0 9.8e-85 310.8
Tan02g2269 . 3 244 14-3-3 family AT5G16050 66.4 1.7e-84 310.1
Tan02g2393 . 2 247 14-3-3 family AT5G16050 64.9 1.7e-84 310.1
Tan02g0162 . 14 221 14-3-3 family AT5G16050 71.8 1.7e-81 300.1
Tan02g0164 . 14 221 14-3-3 family AT5G16050 71.8 1.7e-81 300.1
Tan01g3788 . 5 239 14-3-3 family AT5G16050 65.8 4.7e-79 292.0
Tan02g2500 . 9 246 14-3-3 family AT5G10450 87.4 6.0e-114 407.9
Tan02g2410 . 3 251 14-3-3 family AT5G10450 77.2 1.1e-104 377.1
Tan01g3801 . 1 242 14-3-3 family AT5G10450 79.0 9.6e-104 374.0
Tan04g1848 . 7 259 14-3-3 family AT5G10450 73.6 1.4e-102 370.2
Tan04g1849 . 7 259 14-3-3 family AT5G10450 73.6 1.4e-102 370.2
Tan02g0163 . 1 238 14-3-3 family AT5G10450 67.2 1.6e-87 320.1
Tan02g2393 . 5 236 14-3-3 family AT5G10450 67.2 2.0e-85 313.2
Tan04g1015 . 3 239 14-3-3 family AT5G10450 66.3 4.5e-85 312.0
Tan02g2268 . 3 239 14-3-3 family AT5G10450 65.4 3.2e-83 305.8
Tan02g2269 . 3 239 14-3-3 family AT5G10450 65.4 3.2e-83 305.8
Tan01g3788 . 5 236 14-3-3 family AT5G10450 66.8 5.5e-83 305.1
Tan02g0162 . 14 213 14-3-3 family AT5G10450 71.0 1.1e-78 290.8
Tan02g0164 . 14 213 14-3-3 family AT5G10450 71.0 1.1e-78 290.8
Tan04g1848 . 4 260 14-3-3 family AT3G02520 91.1 9.3e-128 453.8
Tan04g1849 . 4 260 14-3-3 family AT3G02520 91.1 9.3e-128 453.8
Tan02g2410 . 6 252 14-3-3 family AT3G02520 86.7 1.9e-117 419.5
Tan01g3801 . 5 258 14-3-3 family AT3G02520 84.0 2.8e-116 415.6
Tan02g2500 . 10 248 14-3-3 family AT3G02520 75.7 1.8e-99 359.8
Tan04g1015 . 8 256 14-3-3 family AT3G02520 68.9 9.7e-93 337.4
Tan02g2268 . 8 257 14-3-3 family AT3G02520 69.0 1.3e-92 337.0
Tan02g2393 . 1 249 14-3-3 family AT3G02520 69.4 1.3e-92 337.0
Tan02g0163 . 4 238 14-3-3 family AT3G02520 72.2 1.4e-91 333.6
Tan02g2269 . 8 244 14-3-3 family AT3G02520 72.0 1.8e-91 333.2
Tan01g3788 . 1 239 14-3-3 family AT3G02520 70.5 4.2e-88 322.0
Tan02g0162 . 1 213 14-3-3 family AT3G02520 72.1 2.4e-83 306.2
Tan02g0164 . 1 213 14-3-3 family AT3G02520 72.1 2.4e-83 306.2
Tan02g2500 . 9 246 14-3-3 family AT5G65430 88.2 8.8e-115 410.6
Tan01g3801 . 1 242 14-3-3 family AT5G65430 79.4 1.2e-103 373.6
Tan02g2410 . 8 242 14-3-3 family AT5G65430 80.1 3.5e-103 372.1
Tan04g1848 . 7 241 14-3-3 family AT5G65430 78.8 4.5e-103 371.7
Tan04g1849 . 7 241 14-3-3 family AT5G65430 78.8 4.5e-103 371.7
Tan02g0163 . 1 238 14-3-3 family AT5G65430 68.9 8.3e-89 324.3
Tan02g2393 . 5 236 14-3-3 family AT5G65430 69.4 7.8e-87 317.8
Tan04g1015 . 8 239 14-3-3 family AT5G65430 69.4 1.7e-86 316.6
Tan02g2268 . 8 239 14-3-3 family AT5G65430 68.5 1.2e-84 310.5
Tan02g2269 . 8 239 14-3-3 family AT5G65430 68.5 1.2e-84 310.5
Tan01g3788 . 5 236 14-3-3 family AT5G65430 68.5 2.8e-84 309.3
Tan02g0162 . 14 213 14-3-3 family AT5G65430 73.0 5.4e-80 295.0
Tan02g0164 . 14 213 14-3-3 family AT5G65430 73.0 5.4e-80 295.0
Tan02g0163 . 1 259 14-3-3 family AT2G42590 80.8 1.7e-116 416.4
Tan02g0162 . 1 234 14-3-3 family AT2G42590 82.2 3.6e-106 382.1
Tan02g0164 . 1 234 14-3-3 family AT2G42590 82.2 3.6e-106 382.1
Tan01g3788 . 3 240 14-3-3 family AT2G42590 78.6 3.3e-104 375.6
Tan02g2393 . 3 242 14-3-3 family AT2G42590 78.3 4.4e-104 375.2
Tan04g1015 . 6 257 14-3-3 family AT2G42590 75.5 4.4e-104 375.2
Tan02g2268 . 6 255 14-3-3 family AT2G42590 74.9 1.8e-102 369.8
Tan02g2269 . 6 244 14-3-3 family AT2G42590 77.0 1.6e-101 366.7
Tan04g1848 . 8 248 14-3-3 family AT2G42590 73.0 1.1e-91 334.0
Tan04g1849 . 8 248 14-3-3 family AT2G42590 73.0 1.1e-91 334.0
Tan02g2410 . 8 248 14-3-3 family AT2G42590 70.5 7.2e-91 331.3
Tan01g3801 . 8 245 14-3-3 family AT2G42590 71.0 4.7e-90 328.6
Tan02g2500 . 11 248 14-3-3 family AT2G42590 64.7 4.0e-81 298.9
Tan02g2393 . 1 241 14-3-3 family AT1G22300 80.9 8.0e-105 377.5
Tan02g0163 . 6 242 14-3-3 family AT1G22300 78.1 5.7e-103 371.3
Tan02g2269 . 5 245 14-3-3 family AT1G22300 76.8 8.3e-102 367.5
Tan02g2268 . 5 244 14-3-3 family AT1G22300 76.7 2.4e-101 365.9
Tan04g1015 . 5 244 14-3-3 family AT1G22300 77.1 3.1e-101 365.5
Tan01g3788 . 1 240 14-3-3 family AT1G22300 76.7 1.9e-98 356.3
Tan02g0162 . 1 217 14-3-3 family AT1G22300 78.8 1.5e-95 346.7
Tan02g0164 . 1 217 14-3-3 family AT1G22300 78.8 1.5e-95 346.7
Tan04g1848 . 4 246 14-3-3 family AT1G22300 70.4 6.6e-91 331.3
Tan04g1849 . 4 246 14-3-3 family AT1G22300 70.4 6.6e-91 331.3
Tan02g2410 . 8 246 14-3-3 family AT1G22300 69.9 1.8e-88 323.2
Tan01g3801 . 8 245 14-3-3 family AT1G22300 68.9 2.0e-87 319.7
Tan02g2500 . 11 248 14-3-3 family AT1G22300 64.7 1.5e-79 293.5
Tan02g0163 . 11 246 14-3-3 family AT1G34760 81.4 6.1e-105 377.9
Tan02g2393 . 1 245 14-3-3 family AT1G34760 80.0 1.4e-104 376.7
Tan02g2268 . 5 247 14-3-3 family AT1G34760 79.8 4.0e-104 375.2
Tan04g1015 . 5 247 14-3-3 family AT1G34760 79.8 6.8e-104 374.4
Tan02g2269 . 5 243 14-3-3 family AT1G34760 80.3 1.2e-103 373.6
Tan01g3788 . 1 243 14-3-3 family AT1G34760 77.8 1.0e-99 360.5
Tan02g0162 . 1 221 14-3-3 family AT1G34760 81.0 7.3e-98 354.4
Tan02g0164 . 1 221 14-3-3 family AT1G34760 81.0 7.3e-98 354.4
Tan04g1848 . 4 250 14-3-3 family AT1G34760 70.4 4.7e-89 325.1
Tan04g1849 . 4 250 14-3-3 family AT1G34760 70.4 4.7e-89 325.1
Tan02g2410 . 8 245 14-3-3 family AT1G34760 71.4 1.1e-88 323.9
Tan01g3801 . 8 249 14-3-3 family AT1G34760 69.4 5.2e-88 321.6
Tan02g2500 . 11 247 14-3-3 family AT1G34760 64.1 2.2e-78 289.7
Tan02g2268 . 2 254 14-3-3 family AT1G26480 85.4 2.6e-117 419.1
Tan04g1015 . 2 254 14-3-3 family AT1G26480 85.4 1.7e-116 416.4
Tan02g2269 . 2 244 14-3-3 family AT1G26480 86.8 4.5e-114 408.3
Tan02g0163 . 3 242 14-3-3 family AT1G26480 80.4 1.1e-107 387.1
Tan02g2393 . 2 249 14-3-3 family AT1G26480 76.6 2.5e-104 375.9
Tan01g3788 . 3 244 14-3-3 family AT1G26480 76.0 8.3e-100 360.9
Tan02g0162 . 1 217 14-3-3 family AT1G26480 80.6 1.3e-97 353.6
Tan02g0164 . 1 217 14-3-3 family AT1G26480 80.6 1.3e-97 353.6
Tan02g2410 . 8 260 14-3-3 family AT1G26480 72.0 5.7e-93 338.2
Tan01g3801 . 8 256 14-3-3 family AT1G26480 71.3 8.3e-92 334.3
Tan04g1848 . 5 256 14-3-3 family AT1G26480 72.0 5.4e-91 331.6
Tan04g1849 . 5 256 14-3-3 family AT1G26480 72.0 5.4e-91 331.6
Tan02g2500 . 11 244 14-3-3 family AT1G26480 66.2 1.5e-80 297.0
Tan04g1015 . 5 237 14-3-3 family AT1G78220 51.7 1.9e-63 240.0
Tan02g0163 . 6 236 14-3-3 family AT1G78220 50.9 3.3e-63 239.2
Tan02g2393 . 1 234 14-3-3 family AT1G78220 51.1 7.4e-63 238.0
Tan02g2268 . 5 237 14-3-3 family AT1G78220 50.9 2.8e-62 236.1
Tan02g2269 . 5 237 14-3-3 family AT1G78220 50.9 2.8e-62 236.1
Tan01g3788 . 1 234 14-3-3 family AT1G78220 50.2 1.2e-60 230.7
Tan02g0162 . 1 211 14-3-3 family AT1G78220 50.5 5.1e-56 215.3
Tan02g0164 . 1 211 14-3-3 family AT1G78220 50.5 5.1e-56 215.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000281 3 7 3 4 1 5 6 5 5 3 5 5 6 5 5 5 5 6 6 5 5 5 5 4 4 5 4 9 8 4 148