Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3788 ATGGCGAAAGAAAGAGAACTGCTCGTTTACTCTGCTAGATTGGCAGAGCAGGCTGAGAGATATGAAGAGATGGTTGAGGAAATGAAGAAAGTTGCAAAGTTAAATGTGGAATTGACTGTCGAAGAGAGAAATCTGCTGTCTGTTGGCTATAAGAATGTAATAGGAGCTAGACGAGCTTCATGGCGTATTTTGTCTTCAATTGAACAGAAGGAGATTGCCAAACATAATGAGAAGAATGTGGAACGGATAATTGAGTACAGGCATCGGGTTGAAGATGAACTCTCTAAAATATGCAGTGACATATTGTCAATTGTTGACCAGCATCTCCTTCCAAGTTCCTCTGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGATTATTGTCGGTATTTGGCTGAGTTTAAATCTGGCGATGAGCGTAAACAAGTTGCAGATCAGTCTTTAAAGGCTTACGAGGTTGCTTCTACTATTGCTAACTCCGATTTGCCTCCAACTCATCCTATAAGACTTGGCTTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATTTTGAATTCCCCTGAAAGGGCTTGCCACCTTGCCAAGCACGCCTTTGATGAGGCAATTGCAGAACTTGACAGTCTCAATGAAGATTCCTACAAGGACAGTACCCTCATCATGCAGCTTCTCAGGGACAATCTAACCCTGTGGACTTCCGATCTGCCGGAAGAAGGAGAGCAATCCAATGCTGATGAACTTTAG 747 42.57 MAKERELLVYSARLAEQAERYEEMVEEMKKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEIAKHNEKNVERIIEYRHRVEDELSKICSDILSIVDQHLLPSSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKAYEVASTIANSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKHAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPEEGEQSNADEL 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 102710782 102714200 - Tan0013849.1 Tan01g3788 741212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3788 248 PIRSF 14-3-3 1 246 IPR000308 -
Tan01g3788 248 Coils Coil 11 34 - -
Tan01g3788 248 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Tan01g3788 248 Gene3D - 1 246 IPR036815 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Tan01g3788 248 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Tan01g3788 248 Pfam 14-3-3 protein 12 233 IPR023410 -
Tan01g3788 248 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Tan01g3788 248 SMART 1433_4 5 246 IPR023410 -
Tan01g3788 248 FunFam 14-3-3 protein epsilon 1 246 - -
Tan01g3788 248 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Tan01g3788 248 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3788 Tan-Chr1:102710782 Tan02g0163 Tan-Chr2:1433095 4.20E-106 dispersed
Tan01g3788 Tan-Chr1:102710782 Tan02g2393 Tan-Chr2:92527255 2.80E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3788 K06630 - csv:101213169 431.795