Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3801 ATGGCGGTCACCTCTTCCCCTCGTGAGGAGTATGTTTACATGGCCAAGCTCGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCGGCCGCCATAGACAACGAGGAGCTCACCGTCGAGGAGCGGAACCTTCTCTCTGTTGCTTACAAGAATGTTATTGGAGCGCGTAGAGCCTCCTGGAGGATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGGAACGATGATCATGTTTCGGTCATCCGAGAATACAGATCCAAGATCGAGAACGAGCTCTCTAACATCTGTGATGGCATCCTCAAGCTTCTTGACTCCCGCCTTATTTCCTCCGCTGCTTCTGGAGATTCCAAGGTGTTTTATCTCAAAATGAAGGGCGATTACCATAGATACCTGGCTGAATTCAAGACCGGAGCCGAAAGGAAGGAAGCCGCCGAAAGTACCCTCACTGCTTATAAATCTGCTCAGGATATTGCAAATGCTGAACTCGCTCCTACTCACCCCATACGGCTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGAGCCTGCAGCCTTGCCAAACAGGCTTTCGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCGGACATGCAGGATGATGGAGATGAGATTAAAGAATCAGCTCCCAAACGTGATGATGAATAG 777 49.81 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAAIDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIREYRSKIENELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKESAPKRDDE 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 102912002 102914908 + Tan0008294.1 Tan01g3801 741225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3801 258 FunFam 14-3-3 protein epsilon 4 251 - -
Tan01g3801 258 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Tan01g3801 258 PIRSF 14-3-3 2 250 IPR000308 -
Tan01g3801 258 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Tan01g3801 258 Coils Coil 14 34 - -
Tan01g3801 258 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Tan01g3801 258 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Tan01g3801 258 Gene3D - 1 252 IPR036815 -
Tan01g3801 258 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Tan01g3801 258 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Tan01g3801 258 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Tan01g3801 258 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Tan01g3801 258 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Tan01g3801 258 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Tan01g3801 258 Pfam 14-3-3 protein 14 238 IPR023410 -
Tan01g3801 258 SMART 1433_4 8 250 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3801 Tan-Chr1:102912002 Tan04g1848 Tan-Chr4:57508121 2.10E-116 dispersed
Tan02g2500 Tan-Chr2:93571825 Tan01g3801 Tan-Chr1:102912002 1.00E-99 transposed
Tan01g3801 Tan-Chr1:102912002 Tan02g2410 Tan-Chr2:92708655 1.60E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3801 K06630 - csv:101210822 491.5