Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3849 | ATGTTCCCAAAGCCCCACCACCAACCACCGCCCCATTCTCAACCTTTTCCCCGCTCCTTTTCCGTCGCCGCCACTCCACCGCCGCGCGATTCTTCTGCCGTTGCCGATGACGATTCCGCCGCTGGCCCCTCGCCTCTCACTCACGCCATGCTCCCCAAAGAACCGGCCTCCGGCGGCAACGGAGATTCCATCGAAGTCGTCCGCCGCCCCCGCGGCCGGCCTCCGGGATCGAAGAACAAACCGAAGCCGACAGCTATCGTCGTCGCCGCCCGCGACGCCGAGCGGGCGATGAGTCCTTACGTGCTCGAAGTTCCCGGTGGTAGCGATATCGTCGAGGCTATTTCCCGATTTTGCCGCCGCAGAAACACAGGGCTCTGTATTCTCAACGCTTACGGAACCGTCGCTGACGTCACTCTCCGACAGCCGTCCTCCACTCCGGTGGCAAACGTCACTTTCCATGGACGATTCGATATCCTGTCCGTCTGCGCCACTTTCGTTCCTCATACGACGTCGTTTCCGGTCCCTAACGGATTCACCATCACGCTAGCGGGGCCGCAGGGCCAGATCTTCGGCGGCTTGGTCGCCGGAGCTTTAATCGGCGCCGGAATCGTCTATGTAATAGCCGCCTCATTCAACAATCCATCGTATCAACGGTTACCATCAGAGGACGAGGTCAGAAAATTAACCTTCAGCGACGTCGAAGAAGTCCACTCTCCACCGATCTCCGGCGGCAAAGATAGTGAAAACACCGCCGCCGCCGCCGCCGCCGATACTTGCGGCCTGCTGCCGATGTACAGCACTCACTCATCCTCCGACGTAATATGGACTCCCGCCGCTAGACAGCCGCCGGCGCCGCCGCACCACCGCCAGTACTAA | 876 | 60.96 | MFPKPHHQPPPHSQPFPRSFSVAATPPPRDSSAVADDDSAAGPSPLTHAMLPKEPASGGNGDSIEVVRRPRGRPPGSKNKPKPTAIVVAARDAERAMSPYVLEVPGGSDIVEAISRFCRRRNTGLCILNAYGTVADVTLRQPSSTPVANVTFHGRFDILSVCATFVPHTTSFPVPNGFTITLAGPQGQIFGGLVAGALIGAGIVYVIAASFNNPSYQRLPSEDEVRKLTFSDVEEVHSPPISGGKDSENTAAAAAADTCGLLPMYSTHSSSDVIWTPAARQPPAPPHHRQY | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 103244139 | 103245200 | - | Tan0021051.1 | Tan01g3849 | 741273 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3849 | 291 | CDD | DUF296 | 99 | 211 | IPR005175 | - | |
Tan01g3849 | 291 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Tan01g3849 | 291 | FunFam | AT-hook motif nuclear-localized protein | 98 | 229 | - | - | |
Tan01g3849 | 291 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 96 | 223 | - | - | |
Tan01g3849 | 291 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 55 | 245 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Tan01g3849 | 291 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Tan01g3849 | 291 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 99 | 212 | IPR005175 | - | |
Tan01g3849 | 291 | Gene3D | - | 98 | 237 | - | - | |
Tan01g3849 | 291 | ProSiteProfiles | PPC domain profile profile. | 94 | 234 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3849 | Tan-Chr1:103244139 | Tan07g1754 | Tan-Chr7:69092337 | 5.20E-39 | dispersed | |
Tan01g3849 | Tan-Chr1:103244139 | Tan02g2485 | Tan-Chr2:93448395 | 7.90E-80 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3849 | - | - | - | 0.0 |