Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3965 ATGAGTGACAAGAGAGAGAATTCAACTGACGAGGGACTTGAAACAAAGGAGATGGATGATAGAAGTTCATCTTCAGATAATCAAGCAGAGGATGAGCGATACATTCACAGAGTTGCAGTTCCACCAAAGCAGAAACTCTTCAAAGAAATCAAGTCTGGAGTGAAAGAAACATTTTTCCCTGATGATCCTCTGCGTTCATTCAAGGATCAAACGAAGAGGCGCAAATTTATCCTCGGCATTCAGGCCGTTTTCCCGATACTTGAATGGGGAAGAAATTACAATATGACTAAGTTTAGAGGAGATGTTATTGCTGGACTCACTATTGCTAGTCTCTGCATTCCCCAGGATATTGGGTATGCAAAGCTTGCAAATTTAGCTCCACAGTATGGATTGTACTCCAGTTTTGTTCCACCATTAATCTATGCACTTATGGGAAGCTCGAGAGATATAGCCATTGGTCCCGTTGCTGTTGTTTCTCTCTTGTTGGGGACGCTGCTTCAAGCGGAAATCGATTCTGCTACGAATCCAGTAGAATACAGGCGGCTGGCATTTACAGCAACATTCTTTGCAGGGATCACACAAACCACCCTTGGAGTTCTGAGGTTGGGATTCCTAATTGACTTTTTGTCCCATGCTGCCATTGTTGGCTTCATGGGTGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATACAGAAGTTCACAAAGAAAACAGATATTATCTCTGTTATGCAGTCGGTATTCGGCACGTTGCAACACGGATGGAACTGGCAGACAATAGTCATTGCTGCAACCTTCCTTGGCTTTCTTCTATTTGCAAAACTCATTGGGAAGAGGAACAAGAAGCTCTTTTGGGTGCCTGCAATGGCTCCACTCATATCTGTTGTTCTGTCTACCCTTTTGGTTTACCTTACTCGTGCAGATAAGGAAGGGGTTGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCCCGTCTGTTAAAGAATTATATTTCTCAGGCCAATATGTTCTAAAAGGGTTTAAGATTGGTGTCGTGGCGGGTATGGTAGCATTGACGGAAGCTGTTGCGATTGGAAGAACGTTCGCTTCAATGAAAGACTATCAAATTGATGGGAACAAGGAAATGGTAGCAATGGGAGTCATGAATGTTGTTGGTTCAATGACTTCCTGCTACGTAGCAACAGGTTCATTCTCTCGATCCGCCGTAAATTTCATGGCTGGCTGCCATACTGCAGTCTCCAACATTGTGATGTCCATTGTAGTACTCTTAACTTTGGCTTTCATCACCCCACTTTTCAAATATACTCCAAACGCAATTCTGTCTGCTATCATTATATCCGCTGTCATCAACCTGGTCGACTTGCACGCGGCGAAGTTGATATGGAAGATTGATAAATTTGATTTTGTTGCTTGTATGGGAGCCTTCCTCGGCGTCATCTTTTTCTCTGTTGAGATAGGCCTTCTAATCGCGGTATCCATTTCCTTCGCCAAAATCCTTCTACAAGTTACCAGACCAAGGACTGCAATTCTTGGAAAGATCCCAAGGACGACCGTTTATCGAAACATACTGCAATATCCCGAAGCAACCAAAGTTCCAGGCGTTTTGATTGTGAGAGTTGATTCAGCAATTTACTTTTCCAACTCCAATTACATCAAGGAAAGGATATTGAGATGGCTGGTTGATGAGGAAGAATTAACGAAAAAGTCATACCAAAACAAAATCCAGTTTCTAATAGTTGAAATGTCACCTGTTACTGACATAGACACGAGTGGCATACACGCTTTGGAAGAGCTACATGGGAGTCTCAAGAAAAGAGAAATTCAGCTCATTCTAGCAAATCCAGGGCCCGTGGTGATCCACAAGCTTCACATATCGGAGTTTACAGATTTGATAGGCCAAGACAATATCTTCCTCACAGTAGCACATGCAGTCTCATCTTGTAATCCAAAGATAATGAACGACGTGTGA 1986 42.95 MSDKRENSTDEGLETKEMDDRSSSSDNQAEDERYIHRVAVPPKQKLFKEIKSGVKETFFPDDPLRSFKDQTKRRKFILGIQAVFPILEWGRNYNMTKFRGDVIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYALMGSSRDIAIGPVAVVSLLLGTLLQAEIDSATNPVEYRRLAFTATFFAGITQTTLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIQKFTKKTDIISVMQSVFGTLQHGWNWQTIVIAATFLGFLLFAKLIGKRNKKLFWVPAMAPLISVVLSTLLVYLTRADKEGVAIVKHIEKGINPPSVKELYFSGQYVLKGFKIGVVAGMVALTEAVAIGRTFASMKDYQIDGNKEMVAMGVMNVVGSMTSCYVATGSFSRSAVNFMAGCHTAVSNIVMSIVVLLTLAFITPLFKYTPNAILSAIIISAVINLVDLHAAKLIWKIDKFDFVACMGAFLGVIFFSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNILQYPEATKVPGVLIVRVDSAIYFSNSNYIKERILRWLVDEEELTKKSYQNKIQFLIVEMSPVTDIDTSGIHALEELHGSLKKREIQLILANPGPVVIHKLHISEFTDLIGQDNIFLTVAHAVSSCNPKIMNDV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 104464418 104469697 + Tan0019035.1 Tan01g3965 741389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3965 661 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan01g3965 661 Pfam Sulfate permease family 98 479 IPR011547 GO:0016020(InterPro)
Tan01g3965 661 PANTHER SULFATE TRANSPORTER 59 653 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan01g3965 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Tan01g3965 661 FunFam Sulfate transporter 31 510 656 - -
Tan01g3965 661 Pfam STAS domain 531 649 IPR002645 -
Tan01g3965 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Tan01g3965 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Tan01g3965 661 NCBIfam sulfate permease 85 649 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan01g3965 661 Gene3D STAS domain 510 656 IPR036513 -
Tan01g3965 661 Coils Coil 566 586 - -
Tan01g3965 661 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3965 Tan-Chr1:104464418 Tan11g1359 Tan-Chr11:11899646 2.60E-296 dispersed
Tan01g1356 Tan-Chr1:13232594 Tan01g3965 Tan-Chr1:104464418 3.00E-183 transposed
Tan01g3965 Tan-Chr1:104464418 Tan11g1358 Tan-Chr11:11899646 7.40E-235 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3965 K17470 - csv:101207370 1157.9