Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4012 ATGGGAGCTGAAACTGGGCTTGCAGTGTTTTGTGGAATGCTTCATAAAATGAAACCCTATTTGGCTATGATTTCCTTACAATTTGGATATGCAGGAATGTATATCATTACTATGCTCTGCCTTAAGAAGGGCATGAACCATTACGTTCTTGCCGTGTATCGACACCTTGTCGCCACCATTGTCATTTCTCCCTTCGCTCTCGTTCTCGAAAGGAAAATAAGGCCGAAGATGACATTACCCATTCTTATTCGAATAATGCTCCTTGGCTTCCTCGAGCCTGTGTTGGATCAAAATCTATACTACGTGGGATTGAAACTTACCTCAGCAACATTCACATCTGTCACCATCAACATTCTCCCTGCTGTAACCTTCATTATGGCTCTCATTTTCAGGCTGGAAAGTGTAAACTTTAAGAAGGTTCGTAGCATCGCAAAGGTAGTAGGAACATTGGTGACGATCGGCGGAGCAATGGTGATGACGCTTTATAAAGGACCGATCGTCGAAATCTTCCACGGCCACGGACGCCACGCCGCCCAGCACAGCGGCAGCAGCGAGTCGGCCGACCAACACTGGGTCCTCGGCACCCTCATGCTCCTTGGCAGCATCGTCGGCTGGTCCGGCTTCTTCATCTTGCAATCATTCACATTGAAGAAGTATCCGGCGGAGTTGTCGTTGACCGCCTTGATATGCGTGGCCGGCACGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGTGTGTGGGTCATCGGTTGGGACTCTCGACTTCTTGCCGCTGTTTATACGGGTGTGATATGCTCTGGACTTGCTTATTATATACAAGGCGTGGTGATTCGGCAACGTGGCCCAGTTTTTGTTACCTCTTTTACCCCACTCTGCATGATTATTACTGCCTTCCTTGGCTCCGTTGTTTTGGCCGAGCAAATTCACCTTGGAAGCGTAATCGGAGCCATATTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTAAACAAATTAACCAGTCAAAAAGGCGCCGCCGCCGCTGCCACCGAATTACCGATCACCGTCGAGCCGGAAACCGCCACCGCCGCCCCCAACGAGCGTAGCTCTTCCAAGGCTCCGCCGGCGTGA 1140 50.18 MGAETGLAVFCGMLHKMKPYLAMISLQFGYAGMYIITMLCLKKGMNHYVLAVYRHLVATIVISPFALVLERKIRPKMTLPILIRIMLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNFKKVRSIAKVVGTLVTIGGAMVMTLYKGPIVEIFHGHGRHAAQHSGSSESADQHWVLGTLMLLGSIVGWSGFFILQSFTLKKYPAELSLTALICVAGTVEGSIVTLIMERDFSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRQRGPVFVTSFTPLCMIITAFLGSVVLAEQIHLGSVIGAIFIVMGLYLVVWGKAKDHLNKLTSQKGAAAAATELPITVEPETATAAPNERSSSKAPPA 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 105039449 105043115 - Tan0015232.1 Tan01g4012 741436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4012 379 Pfam EamA-like transporter family 22 149 IPR000620 GO:0016020(InterPro)
Tan01g4012 379 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020(InterPro)
Tan01g4012 379 PANTHER WAT1-RELATED PROTEIN 21 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan01g4012 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Tan01g4012 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4012 Tan-Chr1:105039449 Tan11g1293 Tan-Chr11:11016209 2.40E-113 dispersed
Tan01g4012 Tan-Chr1:105039449 Tan01g4019 Tan-Chr1:105138153 9.40E-166 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4012 - - - 0.0