Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4019 ATGGGAGCTGAAACTGGGCTTGCAGTGTTTTGTGGAATGCTTCATAAAATGAAACCCTATTTGGCTATGATTTCCTTACAATTTGGATATGCAGGAATGTATATCATTACTATGCTCTGCCTTAAGAAGGGCATGAACCATTACGTTCTTGCCGTGTATCGACACCTTGTCGCCACCATTGTCATTTCTCCCTTCGCTCTCGTTCTCGAAAGGAAAATAAGGCCGAAGATGACATTACCCATTCTTATTCGAATAATGCTCCTTGGCTTCCTCGAGCCTGTGTTGGATCAAAATCTATACTACGTGGGATTGAAACTTACCTCAGCAACATTCACATCTGTCACCATCAACATTCTCCCTGCTGTAACCTTCATTATGGCTCTCATTTTCAGGCTGGAAAGTGTAAACTTTAAGAAGGTTCGTAGCATCGCAAAGGTAGTAGGAACATTGGTGACGATCGGCGGAGCAATGGTGATGACGCTTTATAAAGGACCGATCGTCGAAATCTTCCACGGCCACGGACGCCACGCCGCCCAGCACAGCGGCAGCAGCGAGTCGGCCGACCAACACTGGGTCCTCGGCACCCTCATGCTCCTTGGCAGCATCGTCGGCTGGTCCGGCTTCTTCATCTTGCAATCATTCACATTGAAGAAGTATCCGGCGGAGTTGTCGCTGACCGCCTTGATATGCGTGGCCGGCACGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGTGTGTGGGTCATCGGTTGGGACTCTCGACTTCTTGCCGCTGTTTATACGGGTGTGATATGCTCTGGACTTGCTTATTATATACAAGGCGTGGTGATTCAGCAACGTGGCCCACGTAATCGGGCCATATTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTAAACAAATTAACCAGTCAAAAAGGCGCCGCCGCCGCCGCCACCAATTACCGATCACCGTCGAGCCGGAAACCGCCACCGCCGCCCCAACGAGCGTAG 1023 50.24 MGAETGLAVFCGMLHKMKPYLAMISLQFGYAGMYIITMLCLKKGMNHYVLAVYRHLVATIVISPFALVLERKIRPKMTLPILIRIMLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNFKKVRSIAKVVGTLVTIGGAMVMTLYKGPIVEIFHGHGRHAAQHSGSSESADQHWVLGTLMLLGSIVGWSGFFILQSFTLKKYPAELSLTALICVAGTVEGSIVTLIMERDFSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIQQRGPRNRAIFIVMGLYLVVWGKAKDHLNKLTSQKGAAAAATNYRSPSSRKPPPPPQRA 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 105138153 105141762 - Tan0015855.1 Tan01g4019 741443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4019 340 MobiDBLite consensus disorder prediction 318 340 - -
Tan01g4019 340 PANTHER WAT1-RELATED PROTEIN 21 292 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan01g4019 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Tan01g4019 340 Pfam EamA-like transporter family 22 149 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4019 Tan-Chr1:105138153 Tan11g1293 Tan-Chr11:11016209 6.60E-94 dispersed
Tan01g4012 Tan-Chr1:105039449 Tan01g4019 Tan-Chr1:105138153 9.40E-166 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4019 - - - 0.0