Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4041 ATGGCGGAGGAGAAAACGGTGTTCGACGGAGAGGCGGCGGAGAGAGTGGTGGCGGAGCTGAGGGAGAGCTATAATTCCGGCAAGACGAGAAGCTACGAATGGAGACTGAAGCAACTGAAAAATCTGTTGAAATTAGTCGATGAAAACGAGCAACCGATGGTCGATACCGTCCATTCCGATCTTTTCAAACCCGAATTCGAAGCCTTCGCTCATGAGATAGCTTTATTAAGAAGTTCATGTAAATTGGCACTTAAAGAACTAAAGCGTTGGATGGCGCCAGAAAAGGTTAAAACTTCAATTACTACATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTTTCGGTGTTGTCCTGATCATTTCTGCTTGGAATTATCCATTCTTATTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCCCCAGCAACATCATCTTTATTGGCAAAACTTTTAGGGAAATATTTGGATACGTCTGCTGTAAAAGTTGTTGAGGGTGCTGTTTCCGAAACTTCTGCTTTGCTGGAGCAGAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGTATAGTGATGGCAGCTGCTGCCAAGCATCTCACACCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCCGTAGTAGTTGATTCAGAAATCAATTTACAAGTTGCGTCTAGGCGGATTATTGTTGGGAAGTGGGGTTGTAACAATGGACAAGCATGCATTGCTCCTGATTATATCATAACTACGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTGAAACAAGAACTGGAGAGATTTTACGGAAAGAATCCGTTCGAAACTAAAGATTTATCTCGCATTGTGAATGCTAACCACTTTGCTCGCTTGTCAAAGCTCTTAGATGATGATAAAGTTTCCGGCAAGATTGTGCATGGAGGTGAAAGGGACAAAACCAAATTACAGATTACTCCAACTCTCTTATTGGATGTTCCTCGAGACTCTCTGATTATGACGGAGGAGATCTTTGGTCCCTTACTTCCCATTCTCACGGTTGACAAAGTGGAGGACAGCTTCGAAATAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACCAACAACAAGAAGCTCAAGGAACAGTTCGTGGCTTCTATTTCTGCCGGAGGTGTGGCCATCAATGACACCACCTTACATCTGGCAGTTAGTACACTACCATTTGGAGGAGTTGGGGAGAGTGGAATGGGAGCTTACCATGGGAAGTTCTCTTTTGATGCATTTAGCCATAAGAAAGCTGTTCTTTATCGAAGTTTTGCAGGCGATGCGCCGATGAGGTACCCGCCATATACAAAGGGAAAGCTGAGAATTCTCAAGGCTCTTCTTGGAGGTGACATATGGGGAATCATTCGTGCACTTTTGGGATGGTCATAG 1458 43.9 MAEEKTVFDGEAAERVVAELRESYNSGKTRSYEWRLKQLKNLLKLVDENEQPMVDTVHSDLFKPEFEAFAHEIALLRSSCKLALKELKRWMAPEKVKTSITTFPSSAAIVPEPFGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLLGKYLDTSAVKVVEGAVSETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIIVGKWGCNNGQACIAPDYIITTKEFAPKLVESLKQELERFYGKNPFETKDLSRIVNANHFARLSKLLDDDKVSGKIVHGGERDKTKLQITPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEIVNSGTKPLAAYLFTNNKKLKEQFVASISAGGVAINDTTLHLAVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGDIWGIIRALLGWS 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 105372011 105382242 + Tan0009119.2 Tan01g4041 741465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4041 485 SUPERFAMILY ALDH-like 14 458 IPR016161 GO:0016491(InterPro)
Tan01g4041 485 FunFam Aldehyde dehydrogenase 21 225 - -
Tan01g4041 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 440 IPR016162 GO:0016491(InterPro)
Tan01g4041 485 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 218 225 IPR029510 GO:0016491(InterPro)
Tan01g4041 485 PANTHER ALDEHYDE DEHYDROGENASE 12 484 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Tan01g4041 485 Pfam Aldehyde dehydrogenase family 11 442 IPR015590 GO:0016491(InterPro)
Tan01g4041 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 222 422 IPR016163 GO:0016620(InterPro)
Tan01g4041 485 FunFam Aldehyde dehydrogenase 222 422 - -
Tan01g4041 485 PIRSF ALDH 1 479 IPR012394 GO:0006081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4041 Tan-Chr1:105372011 Tan07g0743 Tan-Chr7:11833641 3.30E-131 dispersed
Tan01g4041 Tan-Chr1:105372011 Tan01g4042 Tan-Chr1:105373976 4.90E-252 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4041 K00128 - csv:101219329 854.358