Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4042 ATGTCGGAGACGGAGACGGAGACGGAGGTGTTCGACGCGGCGGAGTTGGTGAAGGGGCTGAGAGGGAGTTTTGCCTCCGGCAAGACTCGGAGCTATGAGTGGAGAGTGTCGCAGCTCGAGTGTCTCTTGAAGCTCAGCGTTGACCACGAGGAAGATATCTGCGATGCGCTTCGCTCTGACCTCTCCAAGCCTGTGGTGGAAGCCATCATTCATGAGATAGCTTTATTAAGAAGTTCATGTAAATTGGCACTTAAAGAACTAAAGCGTTGGATGGCGCCAGAAAAGGTTAAAACTTCAATTACTACATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTTTCGGTGTTGTCCTGATCATTTCTGCTTGGAATTATCCATTCTTATTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCCCCAGCAACATCATCTTTATTGGCAAAACTTTTAGGGAAATATTTGGATACGTCTGCTGTAAAAGTTGTTGAGGGTGCTGTTTCCGAAACTTCTGCTTTGCTGGAGCAGAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGTATAGTGATGGCAGCTGCTGCCAAGCATCTCACACCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCCGTAGTAGTTGATTCAGAAATCAATTTACAAGTTGCGTCTAGGCGGATTATTGTTGGGAAGTGGGGTTGTAACAATGGACAAGCATGCATTGCTCCTGATTATATCATAACTACGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTGAAACAAGAACTGGAGAGATTTTACGGAAAGAATCCGTTCGAAACTAAAGATTTATCTCGCATTGTGAATGCTAACCACTTTGCTCGCTTGTCAAAGCTCTTAGATGATGATAAAGTTTCCGGCAAGATTGTGCATGGAGGTGAAAGGGACAAAACCAAATTACAGATTACTCCAACTCTCTTATTGGATGTTCCTCGAGACTCTCTGATTATGACGGAGGAGATCTTTGGTCCCTTACTTCCCATTCTCACGGTTGACAAAGTGGAGGACAGCTTCGAAATAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACCAACAACAAGAAGCTCAAGGAACAGTTCGTGGCTTCTATTTCTGCCGGAGGTGTGGCCATCAATGACACCACCTTACATCTGGCAGTTAGTACACTACCATTTGGAGGAGTTGGGGAGAGTGGAATGGGAGCTTACCATGGGAAGTTCTCTTTTGATGCATTTAGCCATAAGAAAGCTGTTCTTTATCGAAGTTTTGCAGGCGATGCGCCGATGAGGTACCCGCCATATACAAAGGGAAAGCTGAGAATTCTCAAGGCTCTTCTTGGAGGTGACATATGGGGAATCATTCGTGCACTTTTGGGATGGTCATAG 1458 44.92 MSETETETEVFDAAELVKGLRGSFASGKTRSYEWRVSQLECLLKLSVDHEEDICDALRSDLSKPVVEAIIHEIALLRSSCKLALKELKRWMAPEKVKTSITTFPSSAAIVPEPFGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLLGKYLDTSAVKVVEGAVSETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIIVGKWGCNNGQACIAPDYIITTKEFAPKLVESLKQELERFYGKNPFETKDLSRIVNANHFARLSKLLDDDKVSGKIVHGGERDKTKLQITPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEIVNSGTKPLAAYLFTNNKKLKEQFVASISAGGVAINDTTLHLAVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGDIWGIIRALLGWS 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 105373976 105382242 + Tan0009119.1 Tan01g4042 741466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4042 485 PANTHER ALDEHYDE DEHYDROGENASE 13 484 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Tan01g4042 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 440 IPR016162 GO:0016491(InterPro)
Tan01g4042 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 222 422 IPR016163 GO:0016620(InterPro)
Tan01g4042 485 CDD ALDH_F3FHI 13 444 - -
Tan01g4042 485 Pfam Aldehyde dehydrogenase family 25 442 IPR015590 GO:0016491(InterPro)
Tan01g4042 485 PIRSF ALDH 1 479 IPR012394 GO:0006081(InterPro)
Tan01g4042 485 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 218 225 IPR029510 GO:0016491(InterPro)
Tan01g4042 485 FunFam Aldehyde dehydrogenase 222 422 - -
Tan01g4042 485 FunFam Aldehyde dehydrogenase 21 225 - -
Tan01g4042 485 SUPERFAMILY ALDH-like 12 458 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4042 Tan-Chr1:105373976 Tan07g0743 Tan-Chr7:11833641 2.80E-130 dispersed
Tan01g4041 Tan-Chr1:105372011 Tan01g4042 Tan-Chr1:105373976 4.90E-252 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4042 K00128 - csv:101219329 809.29