Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4066 ATGGCGGCAGCGGTCGGAGGAGGTGGTGGTAATGGAGGCGGTTTGATGATCGGCGGTGGAGATGTCTCGAAGGCGCATGCGGCTATGGCTTTGGTGCAAGTAATCAATGGAGGTTATCATGTTATCACCAAAGTCGCGCTCAATGTTGGGATGAACCAGCTCGTATTTTGTTTGTTCCGCGACTTGTTGGCGCTCGCGATTCTTGCCCCTGTTGCTTTTGTTCGGGAGAAGCGTGTTCGTTTGCCTCTGACTCGAGACCTCCTCATATCATTCTTTATTCTTGGTTTAACAGGGATTTTTGGTAACCAGCTTCTCTTTCTTGTTGGACTTGGTTACACTAATCCAACTTATGCTGCTGCCATACAGCCTGCCATTCCGGTTTTTACATTCCTTTTTGCTGTTATAATGGGCACAGAGACCGTGAACTTCCTCAAACTGGAAGGACAGGCAAAGGTTGGAGGTACTCTCGTTTGTGTCTCTGGTGCGGTATTGATGGTTTTATTCCGTGGTCCAGCATTGGTTGGAAACACTGAATCTGACTTCTTGTCGCATAGCGAAATAAGTGCAAGGGGTCAGCCAGAGCCTGCTGGATGGCTAATGTCTAACTTTCTTGAGTATGGATTGGATCATTTTCATGTTGGGGTTTTATGCTTGATAGGGAACTGTATGTGCATGGCTGCTTTCTTGGCTATCCAGGCACGTGTGTTAAAGAAGTATCCTGCCAACTTATCGGTCACAGCATATTCTTATTTATTTGGTGCTATATTGATGGTGATTACATCTTTCTTCATGACCAACGAATCCACAGACTGGAATTTAACGCAATCAGAGTTTTTTGCCGTCCTTTATGCTGGAATTTTTGCATCTGCCATCAACTATGGACTTCTGACATGGTGCAATAAAATATTGGGGCCTGCATTGGTCGCTCTTTACAACCCACTTCAACCTGCAGCGTCTGCGCTGTTGTCGAGAGTTTTCATAGGAAGCCCTATTTATCTTGGAAGTGTTTTGGGAGGATCACTTATAATTGCTGGTCTTTATTTGGTTACTTGGGCGTCGCATAAGGAACGACAAGCAACTACAGTTTTGCTACCTCATTCAACCAGGTCCTCTGAACCACTTATTCACAAAGATACATTGACTAACAAGTTTGCATATCAGATAGGGCACATTTTCTCAGGGTCTGCCTCATCACCCAAATCTGTAGATTAG 1212 45.05 MAAAVGGGGGNGGGLMIGGGDVSKAHAAMALVQVINGGYHVITKVALNVGMNQLVFCLFRDLLALAILAPVAFVREKRVRLPLTRDLLISFFILGLTGIFGNQLLFLVGLGYTNPTYAAAIQPAIPVFTFLFAVIMGTETVNFLKLEGQAKVGGTLVCVSGAVLMVLFRGPALVGNTESDFLSHSEISARGQPEPAGWLMSNFLEYGLDHFHVGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYLFGAILMVITSFFMTNESTDWNLTQSEFFAVLYAGIFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHKERQATTVLLPHSTRSSEPLIHKDTLTNKFAYQIGHIFSGSASSPKSVD 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 105582941 105586990 - Tan0010859.1 Tan01g4066 741490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4066 403 Pfam EamA-like transporter family 27 148 IPR000620 GO:0016020(InterPro)
Tan01g4066 403 Pfam EamA-like transporter family 214 350 IPR000620 GO:0016020(InterPro)
Tan01g4066 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 169 - -
Tan01g4066 403 PANTHER WAT1-RELATED PROTEIN 27 364 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan01g4066 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4066 Tan-Chr1:105582941 Tan09g1858 Tan-Chr9:69866110 3.10E-58 dispersed
Tan01g4066 Tan-Chr1:105582941 Tan02g2023 Tan-Chr2:89481846 1.50E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4066 - - - 0.0