Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4186 ATGAATCCAGTATCACAACCAAAGAAGTTATACATACACTTCCTACATCTTCCGTATGCATATGTCTGGTACCAGGACGATTTTGTTGATCGGATTTGGTCACCCTTTAACTTTCCTCATTACAAAATTATAAGCACTTCATCCACAGTTGATTTAGGAAATAGCAACAGTTATAATTTACCAAGAATTGTAATGAGCACTACTATCACAACCGATAATGCCAGTGCTCCTCTAGAATTTCACTGGGTTCCTGAAGATCCCAGTGCCAAATTTCACATATTCTTGCACTTTGCTGATTTGGAAAAGCTCCAACCCAACCAATCGAGGGAATTTAACATCTTTCAGAATGAGGATCATTTTCATGGGCCTTTTTCTCCTGATTACTTGCAGTCAACTACATTGTTTAGCACAAGCCCAATGAGTGGAGAAACTATTGCATTTAAATTTTTAAAAACTAATACATCAAATCTTCCACCCATCCTCAATGCTCTTGAAATCTACAGGGTGCTAGATGATACATCAGAATCGCGCACTGATGAGCAGGACGTTAAGGCTCTGGTGAACATCAAATCATTTTACGGAGTGAGAAAGAATTGGCAGGGTGATCCATGCCTGCCAAAATCCTTCTTGTGGCATGGTCTTAATTGTAGCTATGATGACCAGAGTCCTAGTAGAATCACCTCTTTGGACTTATCTTCGAGTGGATTGGTGGGGGAAATAGCTACTTCTGTATCCGAGCTCACATCATTACAATATTTGGATTTATCCAACAATAACTTGAGTGGACCGGTGCCTGTTTTTCTATCTGAGTTGCACTCCTTGAAAGTTTTAGACTTGAGGGACAACCCACTTCTTGGTTCTATACCAAACGAACTCATGGAAAGATCAAAAAATGGATCCCTTACACTAAGGGTTGGGGGAGATGCTGAATTTTGTGCTTCATCTTCTTGCCAAAAGAAGAAAAAGAGTTTCACTATTCCAATTGTAGCAACAGTTTCATCATTGCTGGTCCTCTTAGCTGCAATAGCCGTCTGGATTATATTATGGAGAAAACGAGCTCAAAAACAGTCCGTCATAAGACTCGGATCACTAGAGCCAAAAAAACAGCAGCTATCTTACTCACAAATTCAGCGTATGACAAACAACTTTGAGACGAAAATCGGGGAAGGAGGATTTGCAAAAGTATTCCTTGGTTACTTGGATAACACTCAAGTTGCTGTGAAGGTCCTCAAGTCATCGGTTCAAGGCTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGCTGAGAATTCATCATACAAACTTGACTAGCCTTGTTGGATACTGCTACGAAAAGACCAACCTGGTTCTCATTTATGAGTACATAAATAATGGCAACTTAAAAGAACATCTATTAGGCGGAAATGTTCGAGTTCTCAGTTGGGAGGAAAGGATGCAAATAGCGGTCGATGCAGCGCAAGGATTTGAGTATCTGCATCATGGATGTAAGCCACCAATTGTTCACAGAGATGTGAAGTCTGCCAACATCCTTTTGAATGAAAGATTCCAAGCCAAAATAGCCGATTTTGGTCTATCCAAGAGTTTTCCGACCGAAAGTCATACTCATTTGACAACCGTTGTTGCAGGCACCGATGGTTATCTCGATCCCGAGTATTATGCAACTGGCTGGTTGACCGAGAAAAGCGATGTTTACAGTTTTGGAGTTCTCATATTGGAAATAATCACTTCCCTTCCAGTCCTTAAAATTGATCGAGCTACTTCAGAGAAATATCATATAAGCCAATGGGTTATGCACTTCATGAAAACAGGTGATATAAAGAGCATTGTTGATCAAAGGCTAAGAGGAAACTTTGACTTGAGTTCTGCTTGGAAGGCCGTGGAGATTGCTATGGCATGTTTGTCACTGAATTCTATTGAGAGGCCAGGCATGAAGGAGGTCGTTATGGAGTTGACCGAGTGTTTGAAATTAGAGAGAGCTCGAAAAAGAAGAAACGTTCATTCTAATATTGGAAAATCAAATGTCGTTAGTAGAAATTTCAGAGAGAGTGAAGTAACACCTCGTGCTAGATAG 2070 40.19 MNPVSQPKKLYIHFLHLPYAYVWYQDDFVDRIWSPFNFPHYKIISTSSTVDLGNSNSYNLPRIVMSTTITTDNASAPLEFHWVPEDPSAKFHIFLHFADLEKLQPNQSREFNIFQNEDHFHGPFSPDYLQSTTLFSTSPMSGETIAFKFLKTNTSNLPPILNALEIYRVLDDTSESRTDEQDVKALVNIKSFYGVRKNWQGDPCLPKSFLWHGLNCSYDDQSPSRITSLDLSSSGLVGEIATSVSELTSLQYLDLSNNNLSGPVPVFLSELHSLKVLDLRDNPLLGSIPNELMERSKNGSLTLRVGGDAEFCASSSCQKKKKSFTIPIVATVSSLLVLLAAIAVWIILWRKRAQKQSVIRLGSLEPKKQQLSYSQIQRMTNNFETKIGEGGFAKVFLGYLDNTQVAVKVLKSSVQGYKEFEAEVKLLLRIHHTNLTSLVGYCYEKTNLVLIYEYINNGNLKEHLLGGNVRVLSWEERMQIAVDAAQGFEYLHHGCKPPIVHRDVKSANILLNERFQAKIADFGLSKSFPTESHTHLTTVVAGTDGYLDPEYYATGWLTEKSDVYSFGVLILEIITSLPVLKIDRATSEKYHISQWVMHFMKTGDIKSIVDQRLRGNFDLSSAWKAVEIAMACLSLNSIERPGMKEVVMELTECLKLERARKRRNVHSNIGKSNVVSRNFRESEVTPRAR 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 106640172 106647342 + Tan0007936.1 Tan01g4186 741610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4186 689 SMART serkin_6 381 654 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4186 689 Pfam Malectin-like domain 22 169 IPR024788 -
Tan01g4186 689 ProSiteProfiles Protein kinase domain profile. 381 654 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4186 689 Pfam Leucine rich repeat 225 284 IPR001611 GO:0005515(InterPro)
Tan01g4186 689 SUPERFAMILY L domain-like 202 293 - -
Tan01g4186 689 PANTHER OS07G0107800 PROTEIN-RELATED 21 658 - -
Tan01g4186 689 Pfam Protein kinase domain 384 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4186 689 PRINTS Leucine-rich repeat signature 250 263 - -
Tan01g4186 689 PRINTS Leucine-rich repeat signature 271 284 - -
Tan01g4186 689 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 455 663 - -
Tan01g4186 689 SUPERFAMILY Protein kinase-like (PK-like) 363 650 IPR011009 -
Tan01g4186 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4186 689 ProSitePatterns Protein kinases ATP-binding region signature. 387 408 IPR017441 GO:0005524(InterPro)
Tan01g4186 689 CDD STKc_IRAK 387 652 - -
Tan01g4186 689 FunFam Leucine-rich repeat receptor-like kinase 181 313 - -
Tan01g4186 689 Gene3D Ribonuclease Inhibitor 181 303 IPR032675 -
Tan01g4186 689 Gene3D Phosphorylase Kinase; domain 1 345 454 - -
Tan01g4186 689 Gene3D Transferase(Phosphotransferase) domain 1 455 677 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4186 Tan-Chr1:106640172 Tan01g4188 Tan-Chr1:106640172 3.80E-242 dispersed
Tan01g4186 Tan-Chr1:106640172 Tan01g4187 Tan-Chr1:106640172 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67113 PF07714 PK_Tyr_Ser-Thr 6.20E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4186 - - - 0.0