Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4187 ATGAAGTACATTTCTGATGCAAGCTTCACAGAATCTGGAGTAAGTAAGAGCATATCATCAGATTTCAACACTACCACTCTTCCACAGCAATTCTGGTATGTTAGAAGCTTTCCTGAAGGGAAGAGGAACTGTTACACCATAAAGCTTGCTCAAGGTAAAGGTTTCAAGTATTTGATCAGAGCGAGTTTCATGTATGGAGACTATGACAGTGAAGGTAAAGCGCCGGTTTTTGATCTGTACATGGGAATTAATAAATGGGATTCGGTAGTACTGAGCAATGAATCCAGTATCACAACCAAAGAAGTTATACATACACTTCCTACATCTTCCGTATGCATATGTCTGGTGAATACTGGCTTTGGATCACCTTTTATTTCAGCATTGGAGTTTAGACTTTTGAAAAATGCTAGTTATGTTACCGATTCTGAATTTTTAGCTCTCCATAGACGGTTGGATGTAGGATCGACTACCAACAAAACTGTTAGGTACCAGGACGATTTTGTTGATCGGATTTGGTCACCCTTTAACTTTCCTCATTACAAAATTATAAGCACTTCATCCACAGTTGATTTAGGAAATAGCAACAGTTATAATTTACCAAGAATTGTAATGAGCACTACTATCACAACCGATAATGCCAGTGCTCCTCTAGAATTTCACTGGGTTCCTGAAGATCCCAGTGCCAAATTTCACATATTCTTGCACTTTGCTGATTTGGAAAAGCTCCAACCCAACCAATCGAGGGAATTTAACATCTTTCAGAATGAGGATCATTTTCATGGGCCTTTTTCTCCTGATTACTTGCAGTCAACTACATTGTTTAGCACAAGCCCAATGAGTGGAGAAACTATTGCATTTAAATTTTTAAAAACTAATACATCAAATCTTCCACCCATCCTCAATGCTCTTGAAATCTACAGGGTGCTAGATGATACATCAGAATCGCGCACTGATGAGCAGGACGTTAAGGCTCTGGTGAACATCAAATCATTTTACGGAGTGAGAAAGAATTGGCAGGGTGATCCATGCCTGCCAAAATCCTTCTTGTGGCATGGTCTTAATTGTAGCTATGATGACCAGAGTCCTAGTAGAATCACCTCTTTGGACTTATCTTCGAGTGGATTGGTGGGGGAAATAGCTACTTCTGTATCCGAGCTCACATCATTACAATATTTGGATTTATCCAACAATAACTTGAGTGGACCGGTGCCTGTTTTTCTATCTGAGTTGCACTCCTTGAAAGTTTTAGACTTGAGGGACAACCCACTTCTTGGTTCTATACCAAACGAACTCATGGAAAGATCAAAAAATGGATCCCTTACACTAAGGGTTGGGGGAGATGCTGAATTTTGTGCTTCATCTTCTTGCCAAAAGAAGAAAAAGAGTTTCACTATTCCAATTGTAGCAACAGTTTCATCATTGCTGGTCCTCTTAGCTGCAATAGCCGTCTGGATTATATTATGGAGAAAACGAGCTCAAAAACAGTCCGTCATAAGACTCGGATCACTAGAGCCAAAAAAACAGCAGCTATCTTACTCACAAATTCAGCGTATGACAAACAACTTTGAGACGAAAATCGGGGAAGGAGGATTTGCAAAAGTATTCCTTGGTTACTTGGATAACACTCAAGTTGCTGTGAAGGTCCTCAAGTCATCGGTTCAAGGCTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGCTGAGAATTCATCATACAAACTTGACTAGCCTTGTTGGATACTGCTACGAAAAGACCAACCTGGTTCTCATTTATGAGTACATAAATAATGGCAACTTAAAAGAACATCTATTAGGCGGAAATGTTCGAGTTCTCAGTTGGGAGGAAAGGATGCAAATAGCGGTCGATGCAGCGCAAGGATTTGAGTATCTGCATCATGGATGTAAGCCACCAATTGTTCACAGAGATGTGAAGTCTGCCAACATCCTTTTGAATGAAAGATTCCAAGCCAAAATAGCCGATTTTGGTCTATCCAAGAGTTTTCCGACCGAAAGTCATACTCATTTGACAACCGTTGTTGCAGGCACCGATGGTTATCTCGATCCCGAGTATTATGCAACTGGCTGGTTGACCGAGAAAAGCGATGTTTACAGTTTTGGAGTTCTCATATTGGAAATAATCACTTCCCTTCCAGTCCTTAAAATTGATCGAGCTACTTCAGAGAAATATCATATAAGCCAATGGGTTATGCACTTCATGAAAACAGGTGATATAAAGAGCATTGTTGATCAAAGGCTAAGAGGAAACTTTGACTTGAGTTCTGCTTGGAAGGCCGTGGAGATTGCTATGGCATGTTTGTCACTGAATTCTATTGAGAGGCCAGGCATGAAGGAGGTCGTTATGGAGTTGACCGAGTGTTTGAAATTAGAGAGAGCTCGAAAAAGAAGAAACGTTCATTCTAATATTGGAAAATCAAATGTCGTTAGTAGAAATTTCAGAGAGAGTGAAGTAACACCTCGTGCTAGATAG 2487 40.01 MKYISDASFTESGVSKSISSDFNTTTLPQQFWYVRSFPEGKRNCYTIKLAQGKGFKYLIRASFMYGDYDSEGKAPVFDLYMGINKWDSVVLSNESSITTKEVIHTLPTSSVCICLVNTGFGSPFISALEFRLLKNASYVTDSEFLALHRRLDVGSTTNKTVRYQDDFVDRIWSPFNFPHYKIISTSSTVDLGNSNSYNLPRIVMSTTITTDNASAPLEFHWVPEDPSAKFHIFLHFADLEKLQPNQSREFNIFQNEDHFHGPFSPDYLQSTTLFSTSPMSGETIAFKFLKTNTSNLPPILNALEIYRVLDDTSESRTDEQDVKALVNIKSFYGVRKNWQGDPCLPKSFLWHGLNCSYDDQSPSRITSLDLSSSGLVGEIATSVSELTSLQYLDLSNNNLSGPVPVFLSELHSLKVLDLRDNPLLGSIPNELMERSKNGSLTLRVGGDAEFCASSSCQKKKKSFTIPIVATVSSLLVLLAAIAVWIILWRKRAQKQSVIRLGSLEPKKQQLSYSQIQRMTNNFETKIGEGGFAKVFLGYLDNTQVAVKVLKSSVQGYKEFEAEVKLLLRIHHTNLTSLVGYCYEKTNLVLIYEYINNGNLKEHLLGGNVRVLSWEERMQIAVDAAQGFEYLHHGCKPPIVHRDVKSANILLNERFQAKIADFGLSKSFPTESHTHLTTVVAGTDGYLDPEYYATGWLTEKSDVYSFGVLILEIITSLPVLKIDRATSEKYHISQWVMHFMKTGDIKSIVDQRLRGNFDLSSAWKAVEIAMACLSLNSIERPGMKEVVMELTECLKLERARKRRNVHSNIGKSNVVSRNFRESEVTPRAR 828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 106640172 106647342 + Tan0007936.2 Tan01g4187 741611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4187 828 ProSiteProfiles Protein kinase domain profile. 520 793 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4187 828 SUPERFAMILY L domain-like 341 432 - -
Tan01g4187 828 SMART serkin_6 520 793 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4187 828 CDD STKc_IRAK 526 791 - -
Tan01g4187 828 Gene3D Phosphorylase Kinase; domain 1 484 593 - -
Tan01g4187 828 SUPERFAMILY Protein kinase-like (PK-like) 503 789 IPR011009 -
Tan01g4187 828 Pfam Malectin-like domain 1 308 IPR024788 -
Tan01g4187 828 Gene3D Ribonuclease Inhibitor 320 442 IPR032675 -
Tan01g4187 828 ProSitePatterns Protein kinases ATP-binding region signature. 526 547 IPR017441 GO:0005524(InterPro)
Tan01g4187 828 FunFam Leucine-rich repeat receptor-like kinase 320 452 - -
Tan01g4187 828 Gene3D Transferase(Phosphotransferase) domain 1 594 815 - -
Tan01g4187 828 Pfam Protein kinase domain 523 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4187 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4187 828 PANTHER OS07G0107800 PROTEIN-RELATED 2 797 - -
Tan01g4187 828 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 594 802 - -
Tan01g4187 828 Pfam Leucine rich repeat 364 423 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4187 Tan-Chr1:106640172 Tan06g0215 Tan-Chr6:1814721 5.50E-211 dispersed
Tan01g4186 Tan-Chr1:106640172 Tan01g4187 Tan-Chr1:106640172 0.00E+00 tandem
Tan01g4187 Tan-Chr1:106640172 Tan01g4188 Tan-Chr1:106640172 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67114 PF12819 Malectin_like 1.30E-101 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4187 - - - 0.0