Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4205 ATGGCAATGGCTGATTTCAAATTTCATCGTCTTCCTCTGGCTTTCTTCTTTCTGTTTCTTTTGCTTATTCCTTTGATTGCAGCAGAGTGTCAATGTCCTGACGAGGAAGAAGAAGGAACGAGAAACAAAACCTTAGCTCTAAAATACAAACTCGTTGGCATAGCTGCAATTCTCGTTGCTGGAATCATCGGAGTGTTTATTCCGATGCTCGGAAAGGTAATTCCTGCCTTGAGTCCTGAGAAGGAGATTTTCTTTGTCATTAAAGCCTTTGCTGCTGGCGTCATATTGGCCACTGGATTCATCCACGTACTTCCCGATGCTTACCAGAGCTTGACATCGACGAAGCTGAAGGAGGATCCGTGGGCGAAGTTTCCATTCACCGGCTTGGTGGCTATGGTGGCTGCCATCGGCACTCTAATGGTGGACGCTGGCGCTAGCTCTTATTATACTCGGCTTCATCTGAAGAGGTCTCGGCCTGAGGATGAAGAGATGCACGACGGCCATATTCATGTTCATACTCATGGGACTCATGGCCACGCTCATGGCTCTACCGATGTTGCCGGAACACCCGCGGAGATTCTTCGGCACCGCGTGATCTCTCAAGTGTTGGAATTGGGAATAGTGGTACATTCTGTAATTATAGGAATTGGTTTGGGCGTTTCTGAAACTCCAAAAACGATAAGACCTCTTGTGGCCGCCATTACTTTTCATCAGTTATTCGAGGGCATGGGCTTAGGAGGATGCATCGCTCAGGCAAAATTCAAGAACAGGGCAATAATACTAATGGCGCTTTTCTTCTGCTTGACCACACCGGTTGGTATTGCAATAGGTATTGGAGTAACAAACACTTACAATGAAGATAGCCCAAAAGCACTCATAGTTGAGGGGATTTTGAATGCAGCCTCTGCTGGTATCTTAATCTATATGTCTCTTGTAGATCTTCTGGCCGCTGATTTTATGAACCCTAGAATGCAGACCAATGGAAGGCTTCAACTTTTGGCTAATCTTTCACTTATTATTGGAGCTGCCTTAATGTCTTTACTCGGTATATGGGCTTGA 1059 45.7 MAMADFKFHRLPLAFFFLFLLLIPLIAAECQCPDEEEEGTRNKTLALKYKLVGIAAILVAGIIGVFIPMLGKVIPALSPEKEIFFVIKAFAAGVILATGFIHVLPDAYQSLTSTKLKEDPWAKFPFTGLVAMVAAIGTLMVDAGASSYYTRLHLKRSRPEDEEMHDGHIHVHTHGTHGHAHGSTDVAGTPAEILRHRVISQVLELGIVVHSVIIGIGLGVSETPKTIRPLVAAITFHQLFEGMGLGGCIAQAKFKNRAIILMALFFCLTTPVGIAIGIGVTNTYNEDSPKALIVEGILNAASAGILIYMSLVDLLAADFMNPRMQTNGRLQLLANLSLIIGAALMSLLGIWA 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 106832392 106836381 + Tan0020407.1 Tan01g4205 741629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4205 352 Pfam ZIP Zinc transporter 48 348 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Tan01g4205 352 NCBIfam ZIP zinc/iron transport family 32 352 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Tan01g4205 352 PANTHER ZINC/IRON TRANSPORTER 43 351 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4205 Tan-Chr1:106832392 Tan02g0022 Tan-Chr2:598251 4.30E-96 dispersed
Tan01g4205 Tan-Chr1:106832392 Tan01g4206 Tan-Chr1:106832392 1.10E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4205 K14709 - csv:101215851 521.161