Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g4233 | ATGACGATCGCCGCTGCAATTTCAATCAGTATTCTGGTAGGTTCTCTTCTGGCTTGGGGATGGAGGTTCCTGAACTGGATTTGGCTGAAGCCGAAGAAGCTCGAGAAGCTCTTAAGACAGCAAGGCCTCGCCGGAAGTTCCTATCGGCTTCTCTTTGGCGATTCGAAGGACATGGCGACGGCGATTCGCGAAGCGAGATCGCAGCCGATAAACTTCTCTCATGATATTGCTCATCGCGCCGTCGCTTCCTCCCATTTCACCATCAACAAATACGGTAAAAATTGTTTCGTATGGGTTGGGCCAACTCCAAGAGTGTATATAACAGATCCTGAACAACTTAAGACTGTGTTTTCTCTGTTCAATGACATTCGTAAAGCCCCTTTATTTCCTATTGCAAGAAGGCTTGGAAGTGGCGGACTTGTCTCTCTCGAGGGACCTAAATGGTCTAAACATAGAAAAATCATCAATCCTGCATTTCATTCCCAGAAGTTGAAGGATATGTTTCCAGCATTCTTGGAGAGTTGTAATGAGATGATTAAAAAATGGGAATCGATGGTCTGTGAGTCTGAGGAATTAGGGTGTTTTGAGTTAGATGTTTGGCCCGATTTGCAAAATATGACTGCAGATGTGATTTCTCGAACAGCATTTGGGAGTAGCTATGACGAAGGAAAAAAGATTTTCCAATTTTTGAAAAACTGGGTTTCTCTATTGGTCACACGTCTAACCAAGGGAGTCTATAATATTCCTGGCTGGAGGTTTGTACCAACCAAGTTGAATAGGAAGATGGAAGAGGTTGATAGAGAAATACAAACAATGGTTTGGGGAATTATAAGCAAAAGACAAACGGCTATGGAGGCTGGTGAGGCTTCAAATAACGCCGATCTATTAGGAATCCTTTTGGAATCCAATTTAAATCAAGTTCAAGAAGAGCAAGAAAATAAGAATGATGTTGGAATGAGCATGGAAGATATAATTAGTGAATGCAAGCTCTTTTATTTTGCTGGCCAAGAAACCACTGCGGCATTGCTTGTTTGGACCATGGTTCTACTGAGTCGATACTCAGAATGGCAAGATCGAGCAAGAGCAGAAGTGCTTGAAGTTTTTGGTGATGACAACAAATTGGATTTCGATGGTTTAAGTCGTCTCAAAGTAGTAACTATGATACTAAATGAAGTTCTTAGACTCTATCCACCCATTGGTATCTTAGCTCGAGCAATTGACAAAGAAACAAAACTTGGAAACTTGTTATTACCTGCAGAAGTTTCAATAGGCATACCAATCATTCACATCCACCATGATCGCCAAATATGGGGTGAAGATGCAACTGAGTTCAAACCAGAGAGATTTTCAGAGGGAATTTCCAAAGCAACAAAGAATCAAGTTTGCTTCATTCCTTTTGGATGGGGTCCTCGAATTTGTGTTGGTCAAAACTTTGCCATGATCGAAGCAAAAATAGCATTATCAATGATTTTGCAAAGGTTCTCTTTTGAACTTTCTCCATCTTATACTCATGCTCCTACTTCCAATGTCACTGTTCAACCACAACATGGAGCTCATCTCATCCTCCGTCAGCTGTAA | 1578 | 41.44 | MTIAAAISISILVGSLLAWGWRFLNWIWLKPKKLEKLLRQQGLAGSSYRLLFGDSKDMATAIREARSQPINFSHDIAHRAVASSHFTINKYGKNCFVWVGPTPRVYITDPEQLKTVFSLFNDIRKAPLFPIARRLGSGGLVSLEGPKWSKHRKIINPAFHSQKLKDMFPAFLESCNEMIKKWESMVCESEELGCFELDVWPDLQNMTADVISRTAFGSSYDEGKKIFQFLKNWVSLLVTRLTKGVYNIPGWRFVPTKLNRKMEEVDREIQTMVWGIISKRQTAMEAGEASNNADLLGILLESNLNQVQEEQENKNDVGMSMEDIISECKLFYFAGQETTAALLVWTMVLLSRYSEWQDRARAEVLEVFGDDNKLDFDGLSRLKVVTMILNEVLRLYPPIGILARAIDKETKLGNLLLPAEVSIGIPIIHIHHDRQIWGEDATEFKPERFSEGISKATKNQVCFIPFGWGPRICVGQNFAMIEAKIALSMILQRFSFELSPSYTHAPTSNVTVQPQHGAHLILRQL | 525 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 107075002 | 107083161 | + | Tan0013285.1 | Tan01g4233 | 741657 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g4233 | 525 | PRINTS | E-class P450 group I signature | 323 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | E-class P450 group I signature | 88 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | E-class P450 group I signature | 343 | 369 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | E-class P450 group I signature | 473 | 496 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | E-class P450 group I signature | 463 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | Pfam | Cytochrome P450 | 89 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | P450 superfamily signature | 464 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | P450 superfamily signature | 473 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | P450 superfamily signature | 334 | 351 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | PRINTS | P450 superfamily signature | 387 | 398 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 466 | 475 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g4233 | 525 | FunFam | Cytochrome P450 734A1 | 28 | 525 | - | - | |
| Tan01g4233 | 525 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 11 | 518 | IPR050665 | GO:0004497(PANTHER) | |
| Tan01g4233 | 525 | SUPERFAMILY | Cytochrome P450 | 86 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4233 | 525 | Gene3D | Cytochrome P450 | 72 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4233 | Tan-Chr1:107075002 | Tan07g1185 | Tan-Chr7:43993297 | 2.20E-229 | dispersed | |
| Tan01g4233 | Tan-Chr1:107075002 | Tan01g4234 | Tan-Chr1:107115288 | 8.10E-168 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g4233 | - | - | - | 0.0 |