Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g4235 | ATGGTTATAAATAACAGAGAGAAGTTTGAGTCTCCTTCACCATTAATCTTGGTTCAAAAGTTGAAGAAAACTCAGAGCATTTTTGAATCGATTGAAATGTCGTGTGTTGCAGCTACGATTTCGATTTGTATAGTTGTGTTGTTGTTACTGGTATTGGGATGGAAAGTTGTGAACTGGATTTGGCTGAAGCCGAAGAAATTAGAGAAGATTTTAAGACAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTGTACGGAGACTTGAAGGACAGAGCCGCCATGAGAGAACGGGCTATCTCCAAGCCGATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTCTGTTCATCATACCATTCAGAATTATGGTAGGAACTCATTCATGTGGCTTGGGCCCATTCCAAGAGTGCACATAATGGAGACTGAACATCTTAAAACTGTGTTTTCATTAATCAATGATATCCAAAAGCCGAGCATGAATCCCCTGGTCAAGTTACTAGCAGATGGACTTGTAAATCATGAAGGAGCAAAATGGGTCAAGCACAGAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTTAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTACCAAATGGGAAAGCATGGTCTCAGAAGAGGGATTATGTGAGTTGGATGTAATGCCTTATCTACAAAATATGGCTGCCGATGTCATTTCTCGAACAGCATTTGGGAGTAGCTACGAGAAAGGGAAAAAGATCTTCAAACTTCAAACTGAACTAGGTGATTTGGTGATTCAATCTACCTTAGGGATTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCGAACAATAAAATGAAAGAGATGAGTAAACAGATAAGAACTTTGATCTTGGGTATTATAAATGAACGGCAAAAGTCTATGAAGGCAGGAGAAGCTACACATAACGATCTATTAGGACTTCTTATGGAATCCAATTTCAATGAAATTCGAGAACGTGGAAACAATAAAGACATTGGAATGAGCATAGACGATGTTATTGATGAATGCAAGCTTTTCTATATCGCTGGCCAAGAAACTACAGCCACATTACTAATTTGGACTATGGTATTGTTGAGTTCATACTCAGAATGGCAAGAGCGAGCAAGGGCAGAGGTCTTTGAGGTCTTTGGTAACAAAAAACCAGATTATGATGGTTTAAGTCGCCTAAAAGTTGTAACTATGATCTTGAACGAGGTTCTTAGGTTATATCCACCGGTGGCTATGCTTGGTCGTCTTGTTCAAAAAGAGACAAGATTTGGAAATTTGACATTACCAGCAGGAGTGATGTTGGGCTTACCAATTATTCTTATCCAGCGTGATCCTAAGTTATGGGGTGAAGATGCAGGTGAATTTAAACCAGATAGATTTTCAGAGGGTGTTTCTAAAGCAACAAAAAATCCAACCGCTTTCGTCCCGTTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAGGCAAAAATGGCATTATCAATAATCCTACAACGCTTCTCATTTGAGCTTTCTTCATCATATACTCATGCTCCTACCGCTGCTTTAACCACCCAACCTCAACATGGAGCTCATATTGTCCTACACAAACTCTAG | 1650 | 39.64 | MVINNREKFESPSPLILVQKLKKTQSIFESIEMSCVAATISICIVVLLLLVLGWKVVNWIWLKPKKLEKILRQQGFAGNSYRILYGDLKDRAAMRERAISKPMNFSNHIAPRVIPSVHHTIQNYGRNSFMWLGPIPRVHIMETEHLKTVFSLINDIQKPSMNPLVKLLADGLVNHEGAKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVTKWESMVSEEGLCELDVMPYLQNMAADVISRTAFGSSYEKGKKIFKLQTELGDLVIQSTLGIYIPGWRFLPTKSNNKMKEMSKQIRTLILGIINERQKSMKAGEATHNDLLGLLMESNFNEIRERGNNKDIGMSIDDVIDECKLFYIAGQETTATLLIWTMVLLSSYSEWQERARAEVFEVFGNKKPDYDGLSRLKVVTMILNEVLRLYPPVAMLGRLVQKETRFGNLTLPAGVMLGLPIILIQRDPKLWGEDAGEFKPDRFSEGVSKATKNPTAFVPFGWGPRICIGLNFAMIEAKMALSIILQRFSFELSSSYTHAPTAALTTQPQHGAHIVLHKL | 549 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 107160595 | 107164850 | + | Tan0011890.1 | Tan01g4235 | 741659 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g4235 | 549 | Pfam | Cytochrome P450 | 121 | 524 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 490 | 499 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g4235 | 549 | Gene3D | Cytochrome P450 | 104 | 548 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | CDD | CYP72 | 114 | 545 | - | - | |
| Tan01g4235 | 549 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 44 | 541 | IPR050665 | GO:0004497(PANTHER) | |
| Tan01g4235 | 549 | SUPERFAMILY | Cytochrome P450 | 111 | 547 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | FunFam | Cytochrome P450 734A1 | 61 | 549 | - | - | |
| Tan01g4235 | 549 | PRINTS | P450 superfamily signature | 497 | 508 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | P450 superfamily signature | 359 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | P450 superfamily signature | 411 | 422 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | P450 superfamily signature | 488 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | E-class P450 group I signature | 497 | 520 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | E-class P450 group I signature | 235 | 253 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | E-class P450 group I signature | 121 | 140 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | E-class P450 group I signature | 487 | 497 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | E-class P450 group I signature | 348 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4235 | 549 | PRINTS | E-class P450 group I signature | 368 | 394 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4235 | Tan-Chr1:107160595 | Tan09g0552 | Tan-Chr9:49092340 | 2.60E-217 | dispersed | |
| Tan01g4234 | Tan-Chr1:107115288 | Tan01g4235 | Tan-Chr1:107160595 | 1.90E-193 | tandem | |
| Tan01g4235 | Tan-Chr1:107160595 | Tan01g4236 | Tan-Chr1:107175226 | 1.10E-226 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g4235 | - | - | - | 0.0 |