Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g4236 | ATGTGGATTGTGATTTGGATGATTGTGATATTTCTAATTGTATTAGGATGGAGAATTTTGGAGTGGATTTGGATTAAGCCAAAGAAATTGGAGAAGCTTCTCAAACAGCAAGGATTCACTGCAAATTCTTATCGAATTCTCTTTGGTGATTTGAAGGACAGAGCTAAGATGAGGGAGCAGGCACTCTCAAAGCCGATGAACTTCTCCAATCATATTGTTCCACGTGTCATTCCTTCCATTCATCAAACCATTCAAAATTATGGTAAGAATTCATTTATGTGGTTTGGGCCCATTCCAAGAGTGCACATCATGGACCCTCAACATCTTAAAACTGTGTTTTTGCAAATCTATGATTTCCAGAAGCCAATTGTGAACCCTCTTGCCAAGTTGCTTGCAGATGGACTTGTTACTCATGAAGGAACAAAATGGGCTAAACACAGAAAGATAATTAACCCTGCATTCCATTTACAAAACTTGAAGAATATGGAACCAGCATTCTTCCATAGTTGTAACGAGATGATTATCAAATGGGAAAGTATGGTCTCGAAAGAGGGCTTTTGTGAATTGAATGTAATGCCTTATCTACAAAATATGGCTGCTGATATCATTTCTCGAACAGCATTTGGGAGTAGCTATGAAGATGGAAAAAGGATCTTCAACCTTATAAATGAACTGACTGATTTGATGATTAAATCTAACTTAAGTGTCTATATTCCAGGATGGAGGTTTTTACCGACAAAGACAAACAATAAAATGAAACGGATAAGTAAAGAGATAAATAATTCGATCTTGGGAATTATAAATGAAAGGCAAAAGTCTATGAAGATAGGTCGGGATAGAGATGTATTAGACACGCTCATGGAATCCAATTTGAAGGAAAATAATAATGGAATGAGCATAGAAGATGTCATTGGAGAATGCAAGTTTTTGTATATCGCTGGCCAAGAAACAACAGCTACATTACTAACTTGGACAATGATTTTGTTGAGTACATACTCAGAATGGCAAGAACGAGCAAGAGCAGAAGTTTTTGAGGTCTTTGGTAACAAAATACCAAATTTTGATGGCTTAAGTCGCCTAAAAGTTGTAACCATGATTCTAAATGAAGTTCTGAGGTTTTATTCACCAGTGAGCATGCTTACTCGTACAATTCAAAAGGAAACGAAACTTGGTGAATTAACTTTACCAGTTGGGGTAATATTGTGCATACCAGTTATTCTCATCCATCGTGATCCTGAGCTGTGGGGTGAGGATGCTAATGAGTTTAAACCAGAAAGATTTTCAGAGGGAGTTTCTAAGGCTACAAAACATCAAAATGCTTTCCTTCCATTTGGTTCGGGTCCTCGAATATGCATCGGGTTGAACTTTGCCATGATCGAGGCCAAAATGGCGTTATCGATGATTCTACAACGCTTCTCGTTTCAGCTTTCTCCATCATATACTCATGCTCCTACACAGGTTTTGACGATGCAACCTCAACATGGAGCTCATATCATGCTACACAAACTGTAA | 1512 | 37.76 | MWIVIWMIVIFLIVLGWRILEWIWIKPKKLEKLLKQQGFTANSYRILFGDLKDRAKMREQALSKPMNFSNHIVPRVIPSIHQTIQNYGKNSFMWFGPIPRVHIMDPQHLKTVFLQIYDFQKPIVNPLAKLLADGLVTHEGTKWAKHRKIINPAFHLQNLKNMEPAFFHSCNEMIIKWESMVSKEGFCELNVMPYLQNMAADIISRTAFGSSYEDGKRIFNLINELTDLMIKSNLSVYIPGWRFLPTKTNNKMKRISKEINNSILGIINERQKSMKIGRDRDVLDTLMESNLKENNNGMSIEDVIGECKFLYIAGQETTATLLTWTMILLSTYSEWQERARAEVFEVFGNKIPNFDGLSRLKVVTMILNEVLRFYSPVSMLTRTIQKETKLGELTLPVGVILCIPVILIHRDPELWGEDANEFKPERFSEGVSKATKHQNAFLPFGSGPRICIGLNFAMIEAKMALSMILQRFSFQLSPSYTHAPTQVLTMQPQHGAHIMLHKL | 503 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 107175226 | 107181111 | + | Tan0014773.1 | Tan01g4236 | 741660 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g4236 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g4236 | 503 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | Gene3D | Cytochrome P450 | 67 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | Pfam | Cytochrome P450 | 80 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | E-class P450 group I signature | 84 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | E-class P450 group I signature | 198 | 216 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 8 | 495 | IPR050665 | GO:0004497(PANTHER) | |
| Tan01g4236 | 503 | SUPERFAMILY | Cytochrome P450 | 73 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4236 | 503 | FunFam | Cytochrome P450 734A1 | 24 | 503 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4236 | Tan-Chr1:107175226 | Tan09g0552 | Tan-Chr9:49092340 | 1.70E-194 | dispersed | |
| Tan01g4235 | Tan-Chr1:107160595 | Tan01g4236 | Tan-Chr1:107175226 | 1.10E-226 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g4236 | - | - | - | 0.0 |