Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4264 ATGATGCCATCCTTGAAAATCTTAGACCTCAGCTTCAACAAACTAAGTGGACGAATTCCGACCAGATTTGATGCTCTTAAAGGGTTGGATAACATATTTTTAACTGGAAACATGCTGAATGGATCAGTGCCTGATTGGATGTTGAAAGGAAACGGCATCGATCTTTCCTATAATAATTTTGCAGTCAGGGTTGCTGGGCAAAGCTGTCGGTCCCAAAAAGTGAACCTCTTTGCAAGCTCTTCACAAAACAATGATTATGGAATTCTTTCATGTTTAGCAGGCTCGTCCTGTTCAAAATCTTGGTACTCTCTTCATATAAATTGTGGTGGGAAGGAACAAACCATAAATGGAACTACAGTTTTTAAAGGAGACCGAAATACAGGCAGCTCTATGTTTTTTGTAACTGGAACAAATTGGGCAATCAGCAACACTGGTAGTTTTTTGGATGATGGTGACTCTCAAGATGAATACAGTGCAACTAATTCTTCTACTCTTTCTATGACAAATCCTGAACTGTACATGACTGCACGCGTTTCTCCATTATCTGTTACTTACTATGGCTTTTGTATGGGAAATGGAAACTACACAGTAAGCCTCCATTTTGCAGAGATAATGTTTACTGATGACAAGACATTCAGTAGTCTTGGCAGACGCATATTTGATGTTTATATTCAGAAAAAGCTGGTGCTAGAGAATTTCAATATAGTGGATGCAGCAGGTGGGGTTGGTAAAGCAGTCATAAAAAAAATCCCAGTTACTGTGACGAATGGTACATTGGAGATCCGCTTCTATTGGGCCGGGAAGGGGACAAATGCTATCCCTGTGAGGGGAGTTTATGGTCCTCTTATATCAGCTATATCAGTAGATCCTGACTTTGAGGCTCCCTCAGAGGGTGGAGAAACTGGAAAGTCTGGCATATCTGTAGGTGCAGTGATAGGAATTGCAGCCGCCGCAGTTTTTGTTATATTATTGGTTCTCGGAATCCTGTGGTGGAGTGTATGTCTACGACGAGAAAGGACCCTCGAACAAGAGTTACGAGGTTTGGATTTGCAAACTTGCTCTTTTACATTAAGGCAAATAAAAGCCGCCACAAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGTGGTTTCGGTTCTGTCTATAAGGGTGTTCTTGCGGATGGCACAGCAATTGCAGTAAAACAACTATCTTCAAAATCAAAGCAGGGAAATCGTGAGTTCGTGAATGAGATCGGCATGATATCTGCTTTGCAACACCCACATCTAGTCAAGCTTTATGGATGTTGTATTGAAGGAAATCATCTTTTGTTAGTATATGAATACATGGAAAACAATAGCCTTGCCCATGCCTTGTTTGGTCAAGAAGAAAGTGAACTAGAATTGGATTGGTCGACTAGACACAAGATCTGTGTTGGTATAGCAAGAGGTTTGGCTTATCTTCATGAAGAGTCCAGACTAAAGATTGTCCACAGAGACATCAAAGCTACTAATGTTCTGTTAGACAAAGATCTAAACTCCAAGATATCCGACTTCGGCTTGGCCAAGCTTGATGAAGAAGAAAAGACTCACATAAGTACTCGGATCGCTGGAACTTTCGGATACATGGCACCAGAGTATGCAATGCGAGGACACTTGACTGATAAAGCAGATGTTTATAGCTTTGGTGTTGTGGCTTTAGAAATAGTTAGCGGAAGGAGCAACACTACTTTCTGGGCAGATAACGATTGCTGTTATCTTCTAGACTCGGCACTAAAGTTGAAAGAGAAAAACAGTTTGATGGAGCTAGTTGATCCAAGGTTAGGCTCCAACTTCAACAAGGAAGAGGCATTGAGAATGATCAAAATTTCTCTCCATTGCACTAATGTCTCTCCTGCAGCAAGGCCTAACATGTCATCAGTTGTGAGCATGCTGGAAGGCAAGCAGGCTATGGAGGACATAGTGTCGGATTCAAGTGTCACTAAAGAAGCAATAAACAAAGAATGGACTCGTTTATTGGAGGACGCCGAGCGATCTAAGAATGAGGGCCAGAAGTATGGTTTGTTTGCTGATGTCTCGGCAACTGGTTCTTCGACATCTGCGAGCGATCTCTATCCGATTAGCATATCTCAGTACTTGAATATTAGAGATACTAGACTAAGAATTGCATGA 2151 41.47 MMPSLKILDLSFNKLSGRIPTRFDALKGLDNIFLTGNMLNGSVPDWMLKGNGIDLSYNNFAVRVAGQSCRSQKVNLFASSSQNNDYGILSCLAGSSCSKSWYSLHINCGGKEQTINGTTVFKGDRNTGSSMFFVTGTNWAISNTGSFLDDGDSQDEYSATNSSTLSMTNPELYMTARVSPLSVTYYGFCMGNGNYTVSLHFAEIMFTDDKTFSSLGRRIFDVYIQKKLVLENFNIVDAAGGVGKAVIKKIPVTVTNGTLEIRFYWAGKGTNAIPVRGVYGPLISAISVDPDFEAPSEGGETGKSGISVGAVIGIAAAAVFVILLVLGILWWSVCLRRERTLEQELRGLDLQTCSFTLRQIKAATNNFDAANKIGEGGFGSVYKGVLADGTAIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNHLLLVYEYMENNSLAHALFGQEESELELDWSTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEKTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGVVALEIVSGRSNTTFWADNDCCYLLDSALKLKEKNSLMELVDPRLGSNFNKEEALRMIKISLHCTNVSPAARPNMSSVVSMLEGKQAMEDIVSDSSVTKEAINKEWTRLLEDAERSKNEGQKYGLFADVSATGSSTSASDLYPISISQYLNIRDTRLRIA 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107404677 107410692 - Tan0015171.2 Tan01g4264 741688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4264 716 SUPERFAMILY Protein kinase-like (PK-like) 352 640 IPR011009 -
Tan01g4264 716 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524(InterPro)
Tan01g4264 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4264 716 CDD STKc_IRAK 373 640 - -
Tan01g4264 716 Pfam Leucine Rich Repeat 4 24 IPR001611 GO:0005515(InterPro)
Tan01g4264 716 SUPERFAMILY L domain-like 2 61 - -
Tan01g4264 716 Pfam Protein tyrosine and serine/threonine kinase 370 638 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4264 716 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 336 442 - -
Tan01g4264 716 FunFam Putative LRR receptor-like serine/threonine-protein kinase 443 650 - -
Tan01g4264 716 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 653 IPR051824 -
Tan01g4264 716 Pfam Malectin domain 103 286 IPR021720 -
Tan01g4264 716 Gene3D Transferase(Phosphotransferase) domain 1 443 661 - -
Tan01g4264 716 Gene3D Ribonuclease Inhibitor 1 77 IPR032675 -
Tan01g4264 716 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 101 291 - -
Tan01g4264 716 ProSiteProfiles Protein kinase domain profile. 367 644 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4264 716 SMART serkin_6 367 638 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4264 716 Gene3D - 101 290 - -
Tan01g4264 716 Gene3D Phosphorylase Kinase; domain 1 332 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4264 Tan-Chr1:107404677 Tan01g4266 Tan-Chr1:107404912 0.00E+00 dispersed
Tan01g4264 Tan-Chr1:107404677 Tan01g4265 Tan-Chr1:107404912 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67117 PF07714 PK_Tyr_Ser-Thr 5.20E-51 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4264 - - - 0.0