Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4265 ATGTTCCTGTCTAGATTCTTCTTTGTTTCTTTCTTTGGTTTCTTCTTCTTCTTCATTGTTGGGATTCATTCTCAGTCCACTAGATTGCCGGCTGATGAAGTGGAAGCTTTAAAGGAAATAGGAAAGACTTTGGGAAAAAGAGACTGGAACTTCAGTGCAGATCCTTGCAATGGCGGCCATGGATGGATTTCTCAGCCCAACCAAATCCCCAAGAATGTTTCTGGTTTTGAAAATAATCTCACCTGTGATTGCACCTTTCTCAATGCTACAGTCTGCCATGTCATCAGCATAGTTCTCAAATCGCAGAGCCTTCAAGGCACTCTCCCGCCCCATCTTGTTCGCTTGCCCTTTCTGCTGCAAATTGATCTCACTCGGAACTATCTCAGCGGCCAGATTCCTTCAGAATGGGGCTCTACGAATCTTGTCAACATTTCCCTTCTTGGAAATCGATTGACGGGTTTGATTCCAGAGGAGATTGGAAACATCACTACTTTAGAGAATTTGGTCCTGGAAATCAATCAGCTGTCAGGAAGTATTCCTCAAGCGCTTGGAAATTTGCCCCAGTTACAGAGACTACATCTTACCTCGAACAACTTTTCTGGGGAGTTGCCAATGTCGTTGGGAAAGCTGACCACATTGAAGGAATTCCGAATTGGGGACAATAACTTCTCGGGTCCAATACCGAACTTCATAAGTAATTGGACAAATCTTACTGCATTATTCATTCAGGCAAGTGGATTGAGTGGGCCCATTCCTTCTGACATTGGACTATTGACAAAATTATCTGACTTGAGAATCAGTGACTTGAGTGGAGCTTCATCACCCTTTCCACCTCTTAGTAATTTGCAAGACATGACAATTCTGATATTGAGAAGTTGCAACATCACTGGAAGGCTGCCCAACTATCTGGATATGATGCCATCCTTGAAAATCTTAGACCTCAGCTTCAACAAACTAAGTGGACGAATTCCGACCAGATTTGATGCTCTTAAAGGGTTGGATAACATATTTTTAACTGGAAACATGCTGAATGGATCAGTGCCTGATTGGATGTTGAAAGGAAACGGCATCGATCTTTCCTATAATAATTTTGCAGTCAGGGTTGCTGGGCAAAGCTGTCGGTCCCAAAAAGTGAACCTCTTTGCAAGCTCTTCACAAAACAATGATTATGGAATTCTTTCATGTTTAGCAGGCTCGTCCTGTTCAAAATCTTGGTACTCTCTTCATATAAATTGTGGTGGGAAGGAACAAACCATAAATGGAACTACAGTTTTTAAAGGAGACCGAAATACAGGCAGCTCTATGTTTTTTGTAACTGGAACAAATTGGGCAATCAGCAACACTGGTAGTTTTTTGGATGATGGTGACTCTCAAGATGAATACAGTGCAACTAATTCTTCTACTCTTTCTATGACAAATCCTGAACTGTACATGACTGCACGCGTTTCTCCATTATCTGTTACTTACTATGGCTTTTGTATGGGAAATGGAAACTACACAGTAAGCCTCCATTTTGCAGAGATAATGTTTACTGATGACAAGACATTCAGTAGTCTTGGCAGACGCATATTTGATGTTTATATTCAGAAAAAGCTGGTGCTAGAGAATTTCAATATAGTGGATGCAGCAGGTGGGGTTGGTAAAGCAGTCATAAAAAAAATCCCAGTTACTGTGACGAATGGTACATTGGAGATCCGCTTCTATTGGGCCGGGAAGGGGACAAATGCTATCCCTGTGAGGGGAGTTTATGGTCCTCTTATATCAGCTATATCAGTAGATCCTGACTTTGAGGCTCCCTCAGAGGGTGGAGAAACTGGAAAGTCTGGCATATCTGTAGGTGCAGTGATAGGAATTGCAGCCGCCGCAGTTTTTGTTATATTATTGGTTCTCGGAATCCTGTGGTGGAGTGTATGTCTACGACGAGAAAGGACCCTCGAACAAGAGTTACGAGGTTTGGATTTGCAAACTTGCTCTTTTACATTAAGGCAAATAAAAGCCGCCACAAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGTGGTTTCGGTTCTGTCTATAAGGGTGTTCTTGCGGATGGCACAGCAATTGCAGTAAAACAACTATCTTCAAAATCAAAGCAGGGAAATCGTGAGTTCGTGAATGAGATCGGCATGATATCTGCTTTGCAACACCCACATCTAGTCAAGCTTTATGGATGTTGTATTGAAGGAAATCATCTTTTGTTAGTATATGAATACATGGAAAACAATAGCCTTGCCCATGCCTTGTTTGGTCAAGAAGAAAGTGAACTAGAATTGGATTGGTCGACTAGACACAAGATCTGTGTTGGTATAGCAAGAGGTTTGGCTTATCTTCATGAAGAGTCCAGACTAAAGATTGTCCACAGAGACATCAAAGCTACTAATGTTCTGTTAGACAAAGATCTAAACTCCAAGATATCCGACTTCGGCTTGGCCAAGCTTGATGAAGAAGAAAAGACTCACATAAGTACTCGGATCGCTGGAACTTTCGGATACATGGCACCAGAGTATGCAATGCGAGGACACTTGACTGATAAAGCAGATGTTTATAGCTTTGGTGTTGTGGCTTTAGAAATAGTTAGCGGAAGGAGCAACACTACTTTCTGGGCAGATAACGATTGCTGTTATCTTCTAGACTCGGCACTAAAGTTGAAAGAGAAAAACAGTTTGATGGAGCTAGTTGATCCAAGGTTAGGCTCCAACTTCAACAAGGAAGAGGCATTGAGAATGATCAAAATTTCTCTCCATTGCACTAATGTCTCTCCTGCAGCAAGGCCTAACATGTCATCAGTTGTGAGCATGCTGGAAGGCAAGCAGGCTATGGAGGACATAGTGTCGGATTCAAGTGTCACTAAAGAAGCAATAAACAAAGAATGGACTCGTTTATTGGAGGACGCCGAGCGATCTAAGAATGAGGGCCAGAAGTATGGTTTGTTTGCTGATGTCTCGGCAACTGGTTCTTCGACATCTGCGAGCGATCTCTATCCGATTAGCATATCTCAGTACTTGAATATTAGAGATACTAGACTAAGAATTGCATGA 3063 42.05 MFLSRFFFVSFFGFFFFFIVGIHSQSTRLPADEVEALKEIGKTLGKRDWNFSADPCNGGHGWISQPNQIPKNVSGFENNLTCDCTFLNATVCHVISIVLKSQSLQGTLPPHLVRLPFLLQIDLTRNYLSGQIPSEWGSTNLVNISLLGNRLTGLIPEEIGNITTLENLVLEINQLSGSIPQALGNLPQLQRLHLTSNNFSGELPMSLGKLTTLKEFRIGDNNFSGPIPNFISNWTNLTALFIQASGLSGPIPSDIGLLTKLSDLRISDLSGASSPFPPLSNLQDMTILILRSCNITGRLPNYLDMMPSLKILDLSFNKLSGRIPTRFDALKGLDNIFLTGNMLNGSVPDWMLKGNGIDLSYNNFAVRVAGQSCRSQKVNLFASSSQNNDYGILSCLAGSSCSKSWYSLHINCGGKEQTINGTTVFKGDRNTGSSMFFVTGTNWAISNTGSFLDDGDSQDEYSATNSSTLSMTNPELYMTARVSPLSVTYYGFCMGNGNYTVSLHFAEIMFTDDKTFSSLGRRIFDVYIQKKLVLENFNIVDAAGGVGKAVIKKIPVTVTNGTLEIRFYWAGKGTNAIPVRGVYGPLISAISVDPDFEAPSEGGETGKSGISVGAVIGIAAAAVFVILLVLGILWWSVCLRRERTLEQELRGLDLQTCSFTLRQIKAATNNFDAANKIGEGGFGSVYKGVLADGTAIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNHLLLVYEYMENNSLAHALFGQEESELELDWSTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEKTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGVVALEIVSGRSNTTFWADNDCCYLLDSALKLKEKNSLMELVDPRLGSNFNKEEALRMIKISLHCTNVSPAARPNMSSVVSMLEGKQAMEDIVSDSSVTKEAINKEWTRLLEDAERSKNEGQKYGLFADVSATGSSTSASDLYPISISQYLNIRDTRLRIA 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107404912 107413790 - Tan0015171.1 Tan01g4265 741689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4265 1020 Gene3D Phosphorylase Kinase; domain 1 636 746 - -
Tan01g4265 1020 CDD STKc_IRAK 677 944 - -
Tan01g4265 1020 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 405 595 - -
Tan01g4265 1020 Pfam Leucine Rich Repeat 308 328 IPR001611 GO:0005515(InterPro)
Tan01g4265 1020 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515(InterPro)
Tan01g4265 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 957 IPR051824 -
Tan01g4265 1020 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524(InterPro)
Tan01g4265 1020 Gene3D Ribonuclease Inhibitor 268 380 IPR032675 -
Tan01g4265 1020 Gene3D Transferase(Phosphotransferase) domain 1 747 965 - -
Tan01g4265 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase 747 954 - -
Tan01g4265 1020 Pfam Malectin domain 407 590 IPR021720 -
Tan01g4265 1020 SUPERFAMILY L domain-like 68 351 - -
Tan01g4265 1020 ProSiteProfiles Protein kinase domain profile. 671 948 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4265 1020 Gene3D Ribonuclease Inhibitor 205 267 IPR032675 -
Tan01g4265 1020 Gene3D Ribonuclease Inhibitor 62 204 IPR032675 -
Tan01g4265 1020 SUPERFAMILY Protein kinase-like (PK-like) 656 944 IPR011009 -
Tan01g4265 1020 SMART serkin_6 671 942 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4265 1020 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 30 270 - -
Tan01g4265 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4265 1020 Pfam Protein tyrosine and serine/threonine kinase 674 942 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4265 1020 Gene3D - 405 594 - -
Tan01g4265 1020 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 640 746 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4265 Tan-Chr1:107404912 Tan01g4284 Tan-Chr1:107670892 0.00E+00 dispersed
Tan01g4264 Tan-Chr1:107404677 Tan01g4265 Tan-Chr1:107404912 0.00E+00 tandem
Tan01g4265 Tan-Chr1:107404912 Tan01g4266 Tan-Chr1:107404912 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67118 PF07714 PK_Tyr_Ser-Thr 1.00E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4265 - - - 0.0