Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4266 ATGGCGGCCATGGATGGATTTCTCAGCCCAACCAAATCCCCAAGAATGTTTCTGGTTTTGAAAATAATCTCACCTGTGATTGCACCTTTCTCAATGCTACAGTCTGCCATGTCATCAGCATGCACTCTCCCGCCCCATCTTGTTCGCTTGCCCTTTCTGCTGCAAATTGATCTCACTCGGAACTATCTCAGCGGCCAGATTCCTTCAGAATGGGGCTCTACGAATCTTGTCAACATTTCCCTTCTTGGAAATCGATTGACGGGTTTGATTCCAGAGGAGATTGGAAACATCACTACTTTAGAGAATTTGGTCCTGGAAATCAATCAGCTGTCAGGAAGTATTCCTCAAGCGCTTGGAAATTTGCCCCAGTTACAGAGACTACATCTTACCTCGAACAACTTTTCTGGGGAGTTGCCAATGTCGTTGGGAAAGCTGACCACATTGAAGGAATTCCGAATTGGGGACAATAACTTCTCGGGTCCAATACCGAACTTCATAAGTAATTGGACAAATCTTACTGCATTATTCATTCAGGCAAGTGGATTGAGTGGGCCCATTCCTTCTGACATTGGACTATTGACAAAATTATCTGACTTGAGAATCAGTGACTTGAGTGGAGCTTCATCACCCTTTCCACCTCTTAGTAATTTGCAAGACATGACAATTCTGATATTGAGAAGTTGCAACATCACTGGAAGGCTGCCCAACTATCTGGATATGATGCCATCCTTGAAAATCTTAGACCTCAGCTTCAACAAACTAAGTGGACGAATTCCGACCAGATTTGATGCTCTTAAAGGGTTGGATAACATATTTTTAACTGGAAACATGCTGAATGGATCAGTGCCTGATTGGATGTTGAAAGGAAACGGCATCGATCTTTCCTATAATAATTTTGCAGTCAGGGTTGCTGGGCAAAGCTGTCGGTCCCAAAAAGTGAACCTCTTTGCAAGCTCTTCACAAAACAATGATTATGGAATTCTTTCATGTTTAGCAGGCTCGTCCTGTTCAAAATCTTGGTACTCTCTTCATATAAATTGTGGTGGGAAGGAACAAACCATAAATGGAACTACAGTTTTTAAAGGAGACCGAAATACAGGCAGCTCTATGTTTTTTGTAACTGGAACAAATTGGGCAATCAGCAACACTGGTAGTTTTTTGGATGATGGTGACTCTCAAGATGAATACAGTGCAACTAATTCTTCTACTCTTTCTATGACAAATCCTGAACTGTACATGACTGCACGCGTTTCTCCATTATCTGTTACTTACTATGGCTTTTGTATGGGAAATGGAAACTACACAGTAAGCCTCCATTTTGCAGAGATAATGTTTACTGATGACAAGACATTCAGTAGTCTTGGCAGACGCATATTTGATGTTTATATTCAGAAAAAGCTGGTGCTAGAGAATTTCAATATAGTGGATGCAGCAGGTGGGGTTGGTAAAGCAGTCATAAAAAAAATCCCAGTTACTGTGACGAATGGTACATTGGAGATCCGCTTCTATTGGGCCGGGAAGGGGACAAATGCTATCCCTGTGAGGGGAGTTTATGGTCCTCTTATATCAGCTATATCAGTAGATCCTGACTTTGAGGCTCCCTCAGAGGGTGGAGAAACTGGAAAGTCTGGCATATCTGTAGGTGCAGTGATAGGAATTGCAGCCGCCGCAGTTTTTGTTATATTATTGGTTCTCGGAATCCTGTGGTGGAGTGTATGTCTACGACGAGAAAGGACCCTCGAACAAGAGTTACGAGGTTTGGATTTGCAAACTTGCTCTTTTACATTAAGGCAAATAAAAGCCGCCACAAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGTGGTTTCGGTTCTGTCTATAAGGGTGTTCTTGCGGATGGCACAGCAATTGCAGTAAAACAACTATCTTCAAAATCAAAGCAGGGAAATCGTGAGTTCGTGAATGAGATCGGCATGATATCTGCTTTGCAACACCCACATCTAGTCAAGCTTTATGGATGTTGTATTGAAGGAAATCATCTTTTGTTAGTATATGAATACATGGAAAACAATAGCCTTGCCCATGCCTTGTTTGGTCAAGAAGAAAGTGAACTAGAATTGGATTGGTCGACTAGACACAAGATCTGTGTTGGTATAGCAAGAGGTTTGGCTTATCTTCATGAAGAGTCCAGACTAAAGATTGTCCACAGAGACATCAAAGCTACTAATGTTCTGTTAGACAAAGATCTAAACTCCAAGATATCCGACTTCGGCTTGGCCAAGCTTGATGAAGAAGAAAAGACTCACATAAGTACTCGGATCGCTGGAACTTTCGGATACATGGCACCAGAGTATGCAATGCGAGGACACTTGACTGATAAAGCAGATGTTTATAGCTTTGGTGTTGTGGCTTTAGAAATAGTTAGCGGAAGGAGCAACACTACTTTCTGGGCAGATAACGATTGCTGTTATCTTCTAGACTCGGCACTAAAGTTGAAAGAGAAAAACAGTTTGATGGAGCTAGTTGATCCAAGGTTAGGCTCCAACTTCAACAAGGAAGAGGCATTGAGAATGATCAAAATTTCTCTCCATTGCACTAATGTCTCTCCTGCAGCAAGGCCTAACATGTCATCAGTTGTGAGCATGCTGGAAGGCAAGCAGGCTATGGAGGACATAGTGTCGGATTCAAGTGTCACTAAAGAAGCAATAAACAAAGAATGGACTCGTTTATTGGAGGACGCCGAGCGATCTAAGAATGAGGGCCAGAAGTATGGTTTGTTTGCTGATGTCTCGGCAACTGGTTCTTCGACATCTGCGAGCGATCTCTATCCGATTAGCATATCTCAGTACTTGAATATTAGAGATACTAGACTAAGAATTGCATGA 2868 42.15 MAAMDGFLSPTKSPRMFLVLKIISPVIAPFSMLQSAMSSACTLPPHLVRLPFLLQIDLTRNYLSGQIPSEWGSTNLVNISLLGNRLTGLIPEEIGNITTLENLVLEINQLSGSIPQALGNLPQLQRLHLTSNNFSGELPMSLGKLTTLKEFRIGDNNFSGPIPNFISNWTNLTALFIQASGLSGPIPSDIGLLTKLSDLRISDLSGASSPFPPLSNLQDMTILILRSCNITGRLPNYLDMMPSLKILDLSFNKLSGRIPTRFDALKGLDNIFLTGNMLNGSVPDWMLKGNGIDLSYNNFAVRVAGQSCRSQKVNLFASSSQNNDYGILSCLAGSSCSKSWYSLHINCGGKEQTINGTTVFKGDRNTGSSMFFVTGTNWAISNTGSFLDDGDSQDEYSATNSSTLSMTNPELYMTARVSPLSVTYYGFCMGNGNYTVSLHFAEIMFTDDKTFSSLGRRIFDVYIQKKLVLENFNIVDAAGGVGKAVIKKIPVTVTNGTLEIRFYWAGKGTNAIPVRGVYGPLISAISVDPDFEAPSEGGETGKSGISVGAVIGIAAAAVFVILLVLGILWWSVCLRRERTLEQELRGLDLQTCSFTLRQIKAATNNFDAANKIGEGGFGSVYKGVLADGTAIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNHLLLVYEYMENNSLAHALFGQEESELELDWSTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEKTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGVVALEIVSGRSNTTFWADNDCCYLLDSALKLKEKNSLMELVDPRLGSNFNKEEALRMIKISLHCTNVSPAARPNMSSVVSMLEGKQAMEDIVSDSSVTKEAINKEWTRLLEDAERSKNEGQKYGLFADVSATGSSTSASDLYPISISQYLNIRDTRLRIA 955
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107404912 107413174 - Tan0015171.3 Tan01g4266 741690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4266 955 SUPERFAMILY Protein kinase-like (PK-like) 591 879 IPR011009 -
Tan01g4266 955 Gene3D Ribonuclease Inhibitor 31 139 IPR032675 -
Tan01g4266 955 Gene3D Ribonuclease Inhibitor 140 202 IPR032675 -
Tan01g4266 955 Pfam Leucine Rich Repeat 243 263 IPR001611 GO:0005515(InterPro)
Tan01g4266 955 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515(InterPro)
Tan01g4266 955 Gene3D Transferase(Phosphotransferase) domain 1 682 900 - -
Tan01g4266 955 Gene3D Phosphorylase Kinase; domain 1 571 681 - -
Tan01g4266 955 FunFam Putative LRR receptor-like serine/threonine-protein kinase 682 889 - -
Tan01g4266 955 Gene3D Ribonuclease Inhibitor 203 314 IPR032675 -
Tan01g4266 955 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 340 530 - -
Tan01g4266 955 Gene3D - 340 529 - -
Tan01g4266 955 ProSiteProfiles Protein kinase domain profile. 606 883 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4266 955 Pfam Malectin domain 342 525 IPR021720 -
Tan01g4266 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4266 955 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524(InterPro)
Tan01g4266 955 SMART serkin_6 606 877 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4266 955 CDD STKc_IRAK 612 879 - -
Tan01g4266 955 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 40 892 IPR051824 -
Tan01g4266 955 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 575 681 - -
Tan01g4266 955 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 71 166 - -
Tan01g4266 955 Pfam Protein tyrosine and serine/threonine kinase 609 877 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4266 955 SUPERFAMILY L domain-like 41 285 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4264 Tan-Chr1:107404677 Tan01g4266 Tan-Chr1:107404912 0.00E+00 dispersed
Tan01g4266 Tan-Chr1:107404912 Tan01g4274 Tan-Chr1:107550471 3.40E-289 dispersed
Tan01g4265 Tan-Chr1:107404912 Tan01g4266 Tan-Chr1:107404912 0.00E+00 tandem
Tan01g4266 Tan-Chr1:107404912 Tan01g4267 Tan-Chr1:107419781 1.40E-258 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67119 PF07714 PK_Tyr_Ser-Thr 9.20E-51 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4266 - - - 0.0