Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4267 ATGGCGACTGATCTACTTCCATTTCCAACCATTGTAGTTGCTTCCTTCCTTGTTTTTTGTACTGCTCTCGCTGCTCAAGCTCCAAGATTACCTCCTGATGAAACCGATGCTTTCTGGGCTGTAATGGGGGAATTGCAAAAGACGAAGTGGAATTTCAGTGTACGACCATGCAGTGAAGGCTTCGATGGCCATTCTAATTTCACACAAGATGATTATTATTTCTTTGTAAATAAAATCATCTGTAATTGCTCCTATGAGGATGCTACAGTTTGCCACGTCACCCATATATATCTCAAGTCCCAAAGTTTGGCAGGCAGACTTCCATCTCAACTCGTCGCCTTACCTTACCTGGAGGAACTCGATCTCACTCGAAACTATCTTAGCGGCCAAATTCCTCGCGAATGGGGCTCCACAAAGCTCGTCAGAATTTCTCTGCTCGGAAATCAACTGACGGGTTCGGTCCCAGACGAGATAGGAAACATCACTACTCTTACAGATTTGATCCTAGAATCCAATCACCTGTCAGGAAGCTTGCCTTCAACCCTTGGAAATTTGGTCAACTTGGAAAGATTAATTCTTTCCTCGAACAACTTCACTGGGGAGCTCCCGGCGTCTTTAGCAATGCTGACCTCTCTGACCGACTTCCGAATCGGAGACAGTAATTTTGTTGGACAAATACCTAGCTTCATTCAAAATTGGGCAAATATTAGTAGAATACAAATTCAAGCAAGTGGGTTGAGTGGGCCTATTCCTTCTGAAATTGGGCTTCTGAAAAACTTAATCCACCTGAGAATAAGTGACTTGAATGGAGCTTCATCACCTTTTCCGTCACTTAACAATTTGACTATTTTGAAAACTTTAATATTGAGAAATTGCAATATAACAGGAGTGCTGCCTGATAATTTTGATGGGATGAAGAATTTGAAGATCCTAGACCTCAGCTTTAACAAAATAAGTGGGCCTATTCCTCCCAGTTTCTATAGTCTTGTCCGGGTGGATGCAATATTTTTATCTGGAAACTTGCTAAATGGATCAGTGCCTGATTGGATGGCGCGTGAAGGAGAGAGCATTGATCTCTCTTATAATAAATTTACACACTCTACGACTACCGGCTGTCAATCACGAAACTTGAACCAATTCGCAAGCTCTTCACTTGACAATAATTCTAACCTTGTGTCTTGTTTGCCGAACCGCACTTGTGCCCGAGTTGAGTCCCGTCTCCATATAAATTGTGGTGGGAAGGAAGAAACCTTCGAGGGTGTTAAGTTTGAAGGAGATGAAAATACAGGCAAATCATCGCAGTTTTTCGCAAGTAAAACAAATTGGGCATTTAGCAATACTGGCACTTTTATTGACGATGATCGTACTACAGATGACTATATTGCCTTGAATTCATCTGCGTTGTCTATGACAAATGCCACACTCTATGAGACTGCTCGAATTTCTCCACTGTCTCTAACATACTATGTGTATTGTATGGAGAATGGAAACTACACGATAAGCCTCCATTTTGCAGAAATAATGTTTACCAATGATAGAAATTATAGCAGCCTTGGAAGACGCATTTTTGATGTTTTTGTGCAGGGGGAGCTGGTGCTGAAGGATTTTAATATTGTAGATCATGCAGGGGGTATAGGTAAAGCTGTCATAAAAAAGATTCCTGTCGCTATTACTAGTGGTACTTTGGAGATACGATTTTATTGGGCTGGGAAGGGGACAGTTGCTATCCCTGTAAGAGGAGTCTATGGTCCTCTAATTTCAGCCATTTCAGTAGATCCTGATTCATCAAAAGGTCGAACTGCCTTACCTGTAGGTGCAATTGTTGGAATTTCGGTTGCAGTGGCCTTCATTATCATTTTGGCTCTAGGAATTTTGTGGTGGAGAGGCTATCTTGGAAAGAAAAGTACACATCAGCAAGGTTTAGAGGGTCAAGATCTACTCATTGGTTCATTTACATTAAAGCAAATTCAAACGGCAACAAATAACTTTGATGCTTCCAATAAGATAGGAGAAGGTGGTTTTGGACCTGTTTATAAGGGTATTCTCTTGGATGGTACCATGATTGCAGTGAAGCAACTTTCTGCAAAGTCAAAACAAGGAAACCGAGAATTTGTGAATGAGATGGGCTTGATATCATCTGTAAAACACCCACATTTAGTTAAGCTTTATGGATGTTGTACCGAAGCAGATCAACTTTTGCTAGTATATGAATATATGGAAAATAATAGCCTTGCTCAAGCCCTCTTTGGACCTCAAGGATGTCAATTAAAATTGGATTGGGCAACAAGGCAAAAGATTTGTATTGGTATAGCCAAAGGTTTGGCTTTTCTTCATGAGGAGTCAAGATTGAAGATTGTTCACCGAGATATCAAAGGTACTAATGTATTGTTAGATAAAAATCTCAACCCAAAGATATCTGACTTTGGTTTGGCCAAACTTGATGAAGAAGAAAATACTCACATAAGCACTCGGATTGCTGGAACATTTGGATATATGGCACCAGAATATGCAACTCGTGGCTACTTAACTGATAAAGCAGATGTTTATAGCTTTGGTATCGTGGCATTGGAAATAGTTAGTGGACGGAGCAACAATATATATCGCTCGAAGGATAAGTGTCTTTATCTTCTTGATTGGGCACTTGTATTGAAAGAGAAAAACAGTTTAATGGAGCTAGTTGATCCAAAGTTGGGCGCAAGCTTCAACCAAGAAGAGGCAATGGCAATGATCAATATTGCTTTCCTTTGCACCAATGTCTCTCCCTCGGCAAGACCTACCATGTCCTCTGTGGTGAGCATGCTGGAAGGTAAGGTCGCTGTCAAGGAGTTAGTTTCTGATCCAGATGACATGAGAAAAGAGATGGATGCAATGTGGACGCTTATTCAACAAAACGAGAAAATAACTGATGACGAAAACAAGACAGAAATTGTGTCACTTATGGGCATACGATCTACCAGTTCTTCAACATCGATGAAGAGTGGAAAGAAACTAGGCTCTTGA 3000 40.8 MATDLLPFPTIVVASFLVFCTALAAQAPRLPPDETDAFWAVMGELQKTKWNFSVRPCSEGFDGHSNFTQDDYYFFVNKIICNCSYEDATVCHVTHIYLKSQSLAGRLPSQLVALPYLEELDLTRNYLSGQIPREWGSTKLVRISLLGNQLTGSVPDEIGNITTLTDLILESNHLSGSLPSTLGNLVNLERLILSSNNFTGELPASLAMLTSLTDFRIGDSNFVGQIPSFIQNWANISRIQIQASGLSGPIPSEIGLLKNLIHLRISDLNGASSPFPSLNNLTILKTLILRNCNITGVLPDNFDGMKNLKILDLSFNKISGPIPPSFYSLVRVDAIFLSGNLLNGSVPDWMAREGESIDLSYNKFTHSTTTGCQSRNLNQFASSSLDNNSNLVSCLPNRTCARVESRLHINCGGKEETFEGVKFEGDENTGKSSQFFASKTNWAFSNTGTFIDDDRTTDDYIALNSSALSMTNATLYETARISPLSLTYYVYCMENGNYTISLHFAEIMFTNDRNYSSLGRRIFDVFVQGELVLKDFNIVDHAGGIGKAVIKKIPVAITSGTLEIRFYWAGKGTVAIPVRGVYGPLISAISVDPDSSKGRTALPVGAIVGISVAVAFIIILALGILWWRGYLGKKSTHQQGLEGQDLLIGSFTLKQIQTATNNFDASNKIGEGGFGPVYKGILLDGTMIAVKQLSAKSKQGNREFVNEMGLISSVKHPHLVKLYGCCTEADQLLLVYEYMENNSLAQALFGPQGCQLKLDWATRQKICIGIAKGLAFLHEESRLKIVHRDIKGTNVLLDKNLNPKISDFGLAKLDEEENTHISTRIAGTFGYMAPEYATRGYLTDKADVYSFGIVALEIVSGRSNNIYRSKDKCLYLLDWALVLKEKNSLMELVDPKLGASFNQEEAMAMINIAFLCTNVSPSARPTMSSVVSMLEGKVAVKELVSDPDDMRKEMDAMWTLIQQNEKITDDENKTEIVSLMGIRSTSSSTSMKSGKKLGS 999
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107419781 107446700 - Tan0018569.1 Tan01g4267 741691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4267 999 Gene3D Ribonuclease Inhibitor 201 265 IPR032675 -
Tan01g4267 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 952 IPR051824 -
Tan01g4267 999 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 946 - -
Tan01g4267 999 ProSiteProfiles Protein kinase domain profile. 663 944 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4267 999 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 594 - -
Tan01g4267 999 Gene3D Ribonuclease Inhibitor 266 402 IPR032675 -
Tan01g4267 999 Gene3D Ribonuclease Inhibitor 64 200 IPR032675 -
Tan01g4267 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4267 999 Gene3D - 404 593 - -
Tan01g4267 999 CDD STKc_IRAK 669 936 - -
Tan01g4267 999 SUPERFAMILY L domain-like 89 365 - -
Tan01g4267 999 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 738 - -
Tan01g4267 999 SUPERFAMILY Protein kinase-like (PK-like) 647 935 IPR011009 -
Tan01g4267 999 SMART serkin_6 663 934 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4267 999 Pfam Protein tyrosine and serine/threonine kinase 666 934 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4267 999 Pfam Malectin domain 407 589 IPR021720 -
Tan01g4267 999 Gene3D Phosphorylase Kinase; domain 1 631 738 - -
Tan01g4267 999 Pfam Leucine rich repeat 284 342 IPR001611 GO:0005515(InterPro)
Tan01g4267 999 Pfam Leucine Rich Repeat 117 136 IPR001611 GO:0005515(InterPro)
Tan01g4267 999 Pfam Leucine Rich Repeat 187 207 IPR001611 GO:0005515(InterPro)
Tan01g4267 999 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515(InterPro)
Tan01g4267 999 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 36 202 - -
Tan01g4267 999 Gene3D Transferase(Phosphotransferase) domain 1 739 956 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4267 Tan-Chr1:107419781 Tan01g4269 Tan-Chr1:107419781 0.00E+00 dispersed
Tan01g4266 Tan-Chr1:107404912 Tan01g4267 Tan-Chr1:107419781 1.40E-258 tandem
Tan01g4267 Tan-Chr1:107419781 Tan01g4268 Tan-Chr1:107419781 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67120 PF07714 PK_Tyr_Ser-Thr 2.80E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4267 - - - 0.0