Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4274 ATGTTTGTGACACGATTCCTCGCCGTCGCTTTTCTCTTATCTTTCGCTGCCGGCGCCGCTCGGCTGCCGGACGACGAAGTTGAGGCGTTGAGGGAGATCGGAAAGACATTGGGGAAGACGGACTGGAATTTCTCCGCCGATCCCTGCGGCGGTTTGAGCAGCGGTTGGATGTCCAATTCGGAACTTGAATTGGACCCTAATTTTACTAATAATGTCACCTGCAACTGCACGTTCCAGAACAATACTGTCTGTCACGTGACTCGCATTATTCTAAGGGGACAGAGCCTTTCCGGTACTCTGCCACCGCAATTAGTGAGGCTGCCTTTCCTGGTGGAGCTTGATCTCGCCCGCAACTATGTCAGCGGCACAATTCCTCCAGAATGGGGTGCCACCAAGCTTGTCAACCTTTCCGTTATTGGAAATCGATTGACGGGTCCAATCCCAAAAGAGATTGGAAACATCAGCACTCTTGTAGAGTTAAACCTGGAAGTTAATCATTTCTCTGGAAGTCTACCTCCAGAACTTGGAAATTTGCCCAGCTTATCAAGATTACTTCTTACCTCAAACAACTTTTCTGGGGAGCTTCCACCTTCATTGGCAAGGACCTCATTGACGGACCTTCGAATTAGCGATAATCGCTTCACAGGGCCAATACCTAAGTTTATTCAGAACTGGACGGATCTTGTAAAATTAACTATTCAGGGAAGCGGGTTGAGTGGGCCAATTCCATCTGAAATTGGACTTTTGACAAAATTAATTGATATGAGAATCAGTGACTTGAATGGAGTTTCATCACCCTTTCCACCCCTTGATACTTTGACAAATGTGAGAACCCTGATATTGAGGAATTGCAATATAACTGGGGCGCTGCCTGACAATCTTGTTGAGTTGACAAATGTGCAAACCATAGACTTGAGCTTCAACAAAATTACTGGACCAATACCTGCCAGCTTTGAAGCTTTGAAAAAAGTGGATAGAATATATTTAACTGGAAACTTGCTAACTGGATCAGTGCCTTCTTGGATGCTAGAGGATGGAGAAAGCGTTGATCTCTCTTATAACAAATTCACTCAGAGAAATGCTCAAAACACTGGTTGTGAATCACGAAGTATAAATCTATTTGCGAGCTCTTTACAGGACAATAATTCTGGAAGAGTTTCGTGTTTAGCGGGCGCTTGTGGGAAAACTTGGTACTCTCTCCATATCAACTGCGGTGGGGAGGAAGAATTAATTAACGGAACAATAAAGTTTGATGCGGACACAAACACTGGCAAATCATCATTGTTTTTTCAAGGTGGAGAAAATTGGGGTTTTAGCAACACCGGTAATTTTATGGACAATTATCGCTCAACAGACGACTTTGTTGCATTAAATTCATCTGCTCTCTCAATGCCAAATCCTGAATTGTACATGAGGGCACGCATTTCTCCAATTTCCCTTACTTATTACGCGTATTGCATGGGTGATGGAAACTATACAGTAAGCCTCCATTTTGCTGAGATAGTGTTTACTGATGACAAATCTTACAGAAGTCTTGGCAGACGCGTATTTGATGTCTACCTTCAGGGAAAACTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGTGTTGGCAAACCTTTTGTAAAGAAATTCACTGTTTCTGTGACTAATGGTATTCTAGAGATCCGGCTATTTTGGGCTGGGAAGGGGACAAATGCAATCCCTGTAAGAGGAGTTTATGGTCCTCTAATTTCAGCCATTTCTGTTGATCCGGACTTTGTGCCACCGTTGGAAGGTGGAAATGCCATATCTACTGGGGCAGTGGTTGGAATTGTGGCTTCTGTGGTCTTTGTTATCATCTTGGTTCTTGGAATCTTGTGGTGGAGAGGCTGCCTAAGAAAGGAAAGCACACTCGAACAAGAGTTGAAGGGCCTAGATCTAGAGACAGGTTCATTTTCATTAAAACAAATTAGAGCTGCCACAAACAATTTTGATGTTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGTGTTCTTGCCGATGGCACTTTAATTGCAGTGAAACAACTTTCTTCAAAGTCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAGATCAACTTTTGCTAATATACGAGTATCTAGAAAATAATAGTCTTGCTCGTGCCTTGTTCGGACCTGAAGAATGCCAACTGCAATTGGATTGGCCAACTAGGCACAAAATTTGTATTGGTATAGCTAGAGGTTTAGCATATCTTCATGAGGAGTCAAGATTAAAGATCGTTCACCGAGACATCAAAGCTACCAATGTTCTGCTCGATAAAAATCTGAATCCCAAGATTTCTGACTTCGGTTTGGCCAAGCTAGATGAAGAAGGAAATACACACATCAGCACACGGGTTGCCGGAACCTTTGGATATATGGCACCAGAATATGCCATGCGAGGCCACTTAACTGACAAAGCAGATATTTACAGCTTTGGCATTGTGGCATTGGAAATAGTCGGTGGTCGAAGCAACACAAGTTTTCAAACCAAGGATGATTGCTTTTACCTTCTTGACCATGCTAATTCTTTACTTGAGAAAGACAGTTTACTAGAGCTTGTCGATCCACGGTTAGGTTCTAACTTCAACAAGAGCGAGGCAATGGCGATGATCAGTACTGCTCTCCAATGCACGAACATCGTTGCTTCGGACAGACCTGCCATGTCATTAGTGGTGAACATGCTGGAAGGGAACGTTGCTGTGAAGGAGATGGTTTCAGATCCTAATGTCTCAAAACAAGATGTGAATGCAGTGTGGAGCCAAATTTATAGCCAGAGATCGCAAGCGACTGGTGAGAGCCCGACGCAAAGTATGTTGACGGATGGACCCTGGACTGGTTCTTCAACAACTAACAGTGATGTCTATCCCAGCATCATGGATTCAAGATACTTGGAGAATAGGTACAAGGATTGA 3021 43.4 MFVTRFLAVAFLLSFAAGAARLPDDEVEALREIGKTLGKTDWNFSADPCGGLSSGWMSNSELELDPNFTNNVTCNCTFQNNTVCHVTRIILRGQSLSGTLPPQLVRLPFLVELDLARNYVSGTIPPEWGATKLVNLSVIGNRLTGPIPKEIGNISTLVELNLEVNHFSGSLPPELGNLPSLSRLLLTSNNFSGELPPSLARTSLTDLRISDNRFTGPIPKFIQNWTDLVKLTIQGSGLSGPIPSEIGLLTKLIDMRISDLNGVSSPFPPLDTLTNVRTLILRNCNITGALPDNLVELTNVQTIDLSFNKITGPIPASFEALKKVDRIYLTGNLLTGSVPSWMLEDGESVDLSYNKFTQRNAQNTGCESRSINLFASSLQDNNSGRVSCLAGACGKTWYSLHINCGGEEELINGTIKFDADTNTGKSSLFFQGGENWGFSNTGNFMDNYRSTDDFVALNSSALSMPNPELYMRARISPISLTYYAYCMGDGNYTVSLHFAEIVFTDDKSYRSLGRRVFDVYLQGKLELKDFNIADAAGGVGKPFVKKFTVSVTNGILEIRLFWAGKGTNAIPVRGVYGPLISAISVDPDFVPPLEGGNAISTGAVVGIVASVVFVIILVLGILWWRGCLRKESTLEQELKGLDLETGSFSLKQIRAATNNFDVANKIGEGGFGPVYKGVLADGTLIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGDQLLLIYEYLENNSLARALFGPEECQLQLDWPTRHKICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEGNTHISTRVAGTFGYMAPEYAMRGHLTDKADIYSFGIVALEIVGGRSNTSFQTKDDCFYLLDHANSLLEKDSLLELVDPRLGSNFNKSEAMAMISTALQCTNIVASDRPAMSLVVNMLEGNVAVKEMVSDPNVSKQDVNAVWSQIYSQRSQATGESPTQSMLTDGPWTGSSTTNSDVYPSIMDSRYLENRYKD 1006
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107550471 107561924 - Tan0011414.1 Tan01g4274 741698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4274 1006 Gene3D Transferase(Phosphotransferase) domain 1 736 947 - -
Tan01g4274 1006 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 397 588 - -
Tan01g4274 1006 Gene3D Ribonuclease Inhibitor 26 199 IPR032675 -
Tan01g4274 1006 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 735 - -
Tan01g4274 1006 SUPERFAMILY L domain-like 75 357 - -
Tan01g4274 1006 Gene3D Phosphorylase Kinase; domain 1 626 735 - -
Tan01g4274 1006 SUPERFAMILY Protein kinase-like (PK-like) 644 960 IPR011009 -
Tan01g4274 1006 Gene3D Ribonuclease Inhibitor 200 264 IPR032675 -
Tan01g4274 1006 SMART serkin_6 660 946 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4274 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4274 1006 MobiDBLite consensus disorder prediction 964 987 - -
Tan01g4274 1006 CDD STKc_IRAK 666 933 - -
Tan01g4274 1006 Pfam Protein tyrosine and serine/threonine kinase 662 929 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4274 1006 Pfam Leucine Rich Repeat 157 178 IPR001611 GO:0005515(InterPro)
Tan01g4274 1006 Pfam Leucine Rich Repeat 203 225 IPR001611 GO:0005515(InterPro)
Tan01g4274 1006 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 946 IPR051824 -
Tan01g4274 1006 Pfam Malectin domain 399 583 IPR021720 -
Tan01g4274 1006 Gene3D Ribonuclease Inhibitor 265 391 IPR032675 -
Tan01g4274 1006 Gene3D - 397 587 - -
Tan01g4274 1006 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 23 261 - -
Tan01g4274 1006 ProSiteProfiles Protein kinase domain profile. 660 937 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4274 1006 FunFam Putative LRR receptor-like serine/threonine-protein kinase 736 943 - -
Tan01g4274 1006 Pfam Leucine rich repeat 275 334 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4266 Tan-Chr1:107404912 Tan01g4274 Tan-Chr1:107550471 3.40E-289 dispersed
Tan01g4274 Tan-Chr1:107550471 Tan01g4277 Tan-Chr1:107599434 0.00E+00 dispersed
Tan01g4283 Tan-Chr1:107649222 Tan01g4274 Tan-Chr1:107550471 5.60E-57 dispersed
Tan01g4274 Tan-Chr1:107550471 Tan01g4275 Tan-Chr1:107571234 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67126 PF00069 Pkinase 1.20E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4274 - - - 0.0