Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4275 ATGTTTGTGGCTCGATTCCTCGCCGTCGTTTCTCTCTTATCTCTCGCTTCCGGCGTCGCTCGGCTGCCGGACGACGAAGTTGAGGCGTTGAGGGAGATCGGAAAGACATTGGGGAAGACGGACTGGAATTTCACGGCCGATCCATGCGGCGGTTTGATCAGCGGTTTTACATCGGGTTATTCGGATTATCCATCGGGCTATAATTTCGCTAATAACGTCACCTGCAACTGCACGTTCCAGAATAATAGCGTCTGTCACGTCACCAGCATTCTTCTAAGGGCACAGAGCCTTCCAGGTACTTTGCCACCACAAATAGTGAGGTTGCCTTTCCTGCAGGAACTTGATCTCTCCCGCAACTATCTCAGTGGGCCAATTCCTCCAGAATGGGGTTCAACCAAGCTTGTCCAACTTTCCCTTCTTGGAAATCGATTGACGGGTCCAATCCCAAAAGAGATTGGAAACATCAGCACTCTTGTAGAGTTGATCCTTGAAATTAATCATTTCTCTGGAAGTCTACCTCCAGAACTGGGAAATTTGATAAGCTTATCAAGACTTCTTCTTTCCTCAAACAACTTTTCTGGGGAACTCCCACCTTCACTGGCAAGGATTTCCTCATTGACGGACTTTCGAGTTAGTGATAATCACTTCACGGGTTCAATACCTAAGTTTATTCAGAATTGGCCGAATCTTGTAAAATTAGCTATTCAGGCAAGCGGGTTAAGTGGACCACTTCCTTCTGAAATTGGACTTTTGACAAAATTAACTGATATGAGAATCAGTGACTTGAATGGAGTTTCATCACCCTTTCCACCCCTTAATACTTTGACAAATTTGAAAACCCTGATATTGAGGAGTTGCAATATAAATGGAATGCTGCCTGACAATCTTAATGGGTTGACAAACTTGCAAACCTTAGACTTCAGCTTCAACAGAATTACTGGACCAATACCTGCCTGTTTTAAAGCTTTGATACGAGTGGATAGAATATATTTAACTGGAAATTTGCTAAATGGATCAGTGCCTTCTTGGATGCTACAGGATGGAGAAAGCATTGATCTCTCTTATAACAAATTTACTCAGAGAAATACTGGTTGTGAATCACGAAGTTTGAACCTGTTTGCGAGCTCTTCAGAGGACAATAATTCTGGACCAGTTTCATGTTTAGCGGGCACTTGTGGAAAAACTTGGTACTCTCTCCATATCAACTGCGGTGGGAAGGAAGAATTGATTAACGGAACAATAAAGTTTGATGGAGATACAAACACTGGCAAATCATCATTGTTTTTTCAAGGTGGAGAAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACGATGATCGCTCAACAGACGACTTTATTGAATTAAGTTCATTTCCTCTCTCAATGCCAAATCCTGAATTGTACGTCAAGGCACGCATTTCTCCAATTTCTCTTACTTATTATGCATATTGCATGGGTTATGGAAACTACACACTAAGCCTCCATTTTGCTGAGATAGCGTTTACTAATAACAAATCATACAAAAGCCTTGGCAGACGTGCATTCGATGTCTACATTCAGGGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGTATTGGCAAACCTTTTATAAAGAAATTTACTGTTTCTGTGACTAATGGTACTATAGAGATCCGCCTATTTTGGGCTGGGAAGGGGACGAATGCAATCCCTGTAAGAGGAATTTATGGTCCTCTAATTTCAGCCATTTCTGTTGATCCTGACTTTGTGCCACCGTTAGAAGGTGGAAATGCCATATCTACTGGGGCAGTGGTTGGAATTGTGGCTTCTGTGGTCTTTGTTATCATCTTGGTTCTTGGAGTCTTGTGGTGGAGAGGCTGCCTAAGAAAGGAAAGCACACTCAAACAAGAGTTGAAGGACGTAGATCTAGGAACGGATTCATTTTCATTAAGACAAATAAGAGCTGCCACTAAGAATTTTGATGCTGCCAATAAAATTGGAGAAGGTGGTTTTGGCCCTGTTTACAAGGGCATTCTTGCCGATGGCACTATAATTGCAGTGAAACAACTTTCTTCAAAGTCAAAGCAAGGAAATCGCGAATTTTTGAATGAAATAGGTATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGCTGTATTGAAGGAGATCAACTTTTGCTAATATACGAGTATCTGGAAAATAATAGTCTTGCTCGTGCCTTATTCGGACCTGAAGAATGTCAACTAAAATTGGATTGGCCAACTAGACACAAGATTTGTGTTGGTATAGCTAGAGGTTTAGCATATCTTCATGAGGAGTCAAGACTAAAGATCGTTCATCGAGACATCAAAGCTACCAATGTTCTGCTCGATAAATATCTGAACCCCAAGATTTCCGACTTCGGTTTGGCCAAGCTAGATGAAGAAGTAAATACACACATCAGCACACGGGTTGCCGGAACCTTTGGATATATGGCACCAGAATACGCCATGCGAGGCCACTTAACTGACAAAGCAGATGTTTACAGCTTTGGCATTGTGGCATTAGAAATAGTTGGCGGTCGAAGCAACACAAGTTTTCAAACCAAGGATGATTGCTTTTACCTTCTTGACCATGCTAATACTTTACAAGAGAAAGACGATTTACTAGAGCTTGTGGATCCACGGTTAGGCTCTGAATTCGACGAGAGAGAAGCAATGGCGATGATCAATATTGCTCTCCTATGCACGAACACCATTCCTTCGAACAGACCCGTGATGTCATCAGTGGTGAGCATGCTGGAAGGGAAGGTTGCTGTGAAGGAAGTGGTTTCAGATCCTAGTGTCTCAAAGCAGCAAGATGTGAATACAGTGTGGAGCCAAATTTATCGCCAGAGAGGGCAAACCACAGGTGAGAGCCCGACGCAAAGTATGTTGACAGATGGACCATGGACTGGTTCTTCAACTACTGACAGTGATGTCTATCCCATCATCATGGATTCTAAATACTTGGAGAATAGGAACTAG 3015 42.49 MFVARFLAVVSLLSLASGVARLPDDEVEALREIGKTLGKTDWNFTADPCGGLISGFTSGYSDYPSGYNFANNVTCNCTFQNNSVCHVTSILLRAQSLPGTLPPQIVRLPFLQELDLSRNYLSGPIPPEWGSTKLVQLSLLGNRLTGPIPKEIGNISTLVELILEINHFSGSLPPELGNLISLSRLLLSSNNFSGELPPSLARISSLTDFRVSDNHFTGSIPKFIQNWPNLVKLAIQASGLSGPLPSEIGLLTKLTDMRISDLNGVSSPFPPLNTLTNLKTLILRSCNINGMLPDNLNGLTNLQTLDFSFNRITGPIPACFKALIRVDRIYLTGNLLNGSVPSWMLQDGESIDLSYNKFTQRNTGCESRSLNLFASSSEDNNSGPVSCLAGTCGKTWYSLHINCGGKEELINGTIKFDGDTNTGKSSLFFQGGENWGFSNTGSFMDDDRSTDDFIELSSFPLSMPNPELYVKARISPISLTYYAYCMGYGNYTLSLHFAEIAFTNNKSYKSLGRRAFDVYIQGKLELKDFNIADAAGGIGKPFIKKFTVSVTNGTIEIRLFWAGKGTNAIPVRGIYGPLISAISVDPDFVPPLEGGNAISTGAVVGIVASVVFVIILVLGVLWWRGCLRKESTLKQELKDVDLGTDSFSLRQIRAATKNFDAANKIGEGGFGPVYKGILADGTIIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLYGCCIEGDQLLLIYEYLENNSLARALFGPEECQLKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKYLNPKISDFGLAKLDEEVNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVGGRSNTSFQTKDDCFYLLDHANTLQEKDDLLELVDPRLGSEFDEREAMAMINIALLCTNTIPSNRPVMSSVVSMLEGKVAVKEVVSDPSVSKQQDVNTVWSQIYRQRGQTTGESPTQSMLTDGPWTGSSTTDSDVYPIIMDSKYLENRN 1004
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107571234 107588817 - Tan0015208.1 Tan01g4275 741699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4275 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4275 1004 Gene3D Transferase(Phosphotransferase) domain 1 735 953 - -
Tan01g4275 1004 Pfam Leucine rich repeat 276 336 IPR001611 GO:0005515(InterPro)
Tan01g4275 1004 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 628 734 - -
Tan01g4275 1004 FunFam Putative LRR receptor-like serine/threonine-protein kinase 735 942 - -
Tan01g4275 1004 SMART serkin_6 659 930 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4275 1004 Gene3D Ribonuclease Inhibitor 204 390 IPR032675 -
Tan01g4275 1004 CDD STKc_IRAK 665 932 - -
Tan01g4275 1004 Gene3D Phosphorylase Kinase; domain 1 625 734 - -
Tan01g4275 1004 ProSiteProfiles Protein kinase domain profile. 659 910 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4275 1004 SUPERFAMILY Protein kinase-like (PK-like) 643 944 IPR011009 -
Tan01g4275 1004 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 396 587 - -
Tan01g4275 1004 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 23 263 - -
Tan01g4275 1004 MobiDBLite consensus disorder prediction 962 984 - -
Tan01g4275 1004 SUPERFAMILY L domain-like 77 359 - -
Tan01g4275 1004 Pfam Leucine Rich Repeat 111 130 IPR001611 GO:0005515(InterPro)
Tan01g4275 1004 Pfam Leucine Rich Repeat 181 201 IPR001611 GO:0005515(InterPro)
Tan01g4275 1004 Gene3D - 396 586 - -
Tan01g4275 1004 Gene3D Ribonuclease Inhibitor 54 199 IPR032675 -
Tan01g4275 1004 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 946 IPR051824 -
Tan01g4275 1004 Pfam Protein tyrosine and serine/threonine kinase 662 929 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4275 1004 Pfam Malectin domain 398 582 IPR021720 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4275 Tan-Chr1:107571234 Tan01g4284 Tan-Chr1:107670892 0.00E+00 dispersed
Tan01g4274 Tan-Chr1:107550471 Tan01g4275 Tan-Chr1:107571234 0.00E+00 tandem
Tan01g4275 Tan-Chr1:107571234 Tan01g4276 Tan-Chr1:107599434 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67127 PF07714 PK_Tyr_Ser-Thr 4.70E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4275 - - - 0.0