Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4281 ATGAATCATTTTTATGGAAGTCTACCTCCAGAACTTGGAAATTTGCCCAGATTATCAATGTTAATTATTTCCTCAAACAACTTCTCTGGGGAGCTCCCACCTTCACTGGCTAGGATAACCTCAATGACGGACTTAGCTATTCGGGCAAGCGGGTTGACTGGACCCATTCCTTCTGAAATTGGACTATTGACAAACTTGGTTGATGTGAGAATCTGTGACTTGGAGGGAGATTCATCACCCTTTCCACCGCTTCATACTTTGACAAAATTGAAAGTTCTGTTATTGAGGAATTGCAATATAACTGGGATGCTGCCCGACAATCTTGATGGGTTGACAGAATTGCAAAACTTAGACTTCAGCTTCAACAAAATTACTGGACCAATACCTGAAAGCTTTGCAGCTTTGAAAAACGTGAAGGGCATATATTTAACTGGGAATTTGCTAAATGGATCAGTGCCTCCTTGGATGCTACAGAATGGAGAAAACATTGATCTCTCTTATAACAAATTTACTCCGAGTAATGATCAAAACATTGGTTGTGAATTACGAAATTTAAATCTTTTTGCGAGCTCTTCACAGGACAATAATTCTGGAACAGTTTCATGTTTAGAGGACGCTTGTAGAAAAACATGGTACTTTCTCCACATCAACTGCGGTGGGAAGGAAGAATTAATTAACGGAACAATCAAGTTTGATGGAGACACAAACACGGGCAAATCGTCATTATTTTTTCAAGGTGGAGAAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACGATGATAGCTCAGCATACGACTTTATTGCATTAAATTCATCTGCTCTCTCAATGCCAAATTCTGAATTGTACGTGAGGGCACGCATTTCTCCACTCTCTCTTACTTATTATGCATATTGCATGGGTAATGGAAACTACACCGTAAGCCTCCATTTTGCTGAGATAGAGTTTACTAATGACAAAACATACAAAAGCCTCGGCAGACGCGTATTTGATGTCTATGTTCAGAGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGTGTTGGCAAACCTTTTGTAAAGAAATTCACTGTTTCTGTGACCAATGGTACTATAGAGATCCGCCTATTTTGGGCTGGGAAGGGGACACATGCAATCCCTGAGAGAGGAGTTTACGGTCCTCTAATTTCAGCCATTTCTATTGAACCTGACTTTATGCCACCATCAGAAAGTGGAAATGGCATGTCTGCCGGTCCAGAGGTTGGAATTGTGACTGCTGTCCTCTTTGTTATTATATTGGTTCAAAGACTCTTGTGGTGGAGAGGCTGCCCAAGAAAGAAAAACACACTTGAAGAAGAGTTGAAGGGCCTAGATCTAGGAACAGGTTCATTTTCATTAAGACAAATCAGAGCGGCCACTAACAATTTTGATGCTGCCAATAAAATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGTGTTCTTTCCGATGGCACTGTAATTGCAGTGAAACAACTTTCTTCAAAGTCAAAGCAGGGAAATCGTGAATTTTTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTCATGGATGCTGTATTGAAGGAGATCAACTTTTGCTAATATATGAGTATCTGGAAAATAATAGTCTTGCTCGTGCCTTGTTCGGACCTGAAGAATGTCAACTGGAATTGGATTGGCCAACTAGGCACAAGATTTGTGTTGGTATAGCTAGAGGTTTAGCATATCTTCATGAGGAGTCAAGACTTAAGATCGTTCATCGAGACATCAAAGCTACCAATGTTCTGCTCGATAAAAATCTCAACCCCAAGATTTCCGACTTCGGTTTGGCCAAGCTGGATGAAGAAGAAAATACACACATCAGCACACGGGTGGCTGGAACCTATGGGTATATGGCACCAGAATACGCAATGCGTGGCTACTTAACTGACAAGGCAGATGTTTATAGCTTTGGCATTGTGGCGTTGGAAATAGTCGGTGGTCGAAGCAACACAAGTTTTCGAACTAAGGATGATTGCTTTTACCTTCTTGACCATGCTAATACTTTAAAAGAAAAAGACAGTTTACTAGAGCTTGTGGATCCACGGTTAGGCTCTGAATTGAACAAGAGTGAGGCACTGACAGTGATCAATATTGCTCTCCTGTGCACAAACGTTGCTGCTGCGGACAGACCTGCCATGTCATCAGTGGTGAGCATGCTGGAAGGGAAGGATGCTGTGAAGGAGGTGGTTTCAGACCCTAGTGTTTCAAAACAAGATGTGAATGCAGTGTGGAGCCAAATTTATCGCCAGAAAGTGCAAACAACGAGTGAGAGCTCGACGCATAGTGTGTTGACGGATGGACCATGGACTGGTTCTTCGACTACTGACAGTGAAGTCTATCCCATCCTCAAGGCTTCTAAGTACTAG 2442 41.93 MNHFYGSLPPELGNLPRLSMLIISSNNFSGELPPSLARITSMTDLAIRASGLTGPIPSEIGLLTNLVDVRICDLEGDSSPFPPLHTLTKLKVLLLRNCNITGMLPDNLDGLTELQNLDFSFNKITGPIPESFAALKNVKGIYLTGNLLNGSVPPWMLQNGENIDLSYNKFTPSNDQNIGCELRNLNLFASSSQDNNSGTVSCLEDACRKTWYFLHINCGGKEELINGTIKFDGDTNTGKSSLFFQGGENWGFSNTGSFMDDDSSAYDFIALNSSALSMPNSELYVRARISPLSLTYYAYCMGNGNYTVSLHFAEIEFTNDKTYKSLGRRVFDVYVQRKLELKDFNIADAAGGVGKPFVKKFTVSVTNGTIEIRLFWAGKGTHAIPERGVYGPLISAISIEPDFMPPSESGNGMSAGPEVGIVTAVLFVIILVQRLLWWRGCPRKKNTLEEELKGLDLGTGSFSLRQIRAATNNFDAANKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLHGCCIEGDQLLLIYEYLENNSLARALFGPEECQLELDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGIVALEIVGGRSNTSFRTKDDCFYLLDHANTLKEKDSLLELVDPRLGSELNKSEALTVINIALLCTNVAAADRPAMSSVVSMLEGKDAVKEVVSDPSVSKQDVNAVWSQIYRQKVQTTSESSTHSVLTDGPWTGSSTTDSEVYPILKASKY 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107599434 107607838 - Tan0007910.6 Tan01g4281 741705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4281 813 SUPERFAMILY Protein kinase-like (PK-like) 458 771 IPR011009 -
Tan01g4281 813 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 761 IPR051824 -
Tan01g4281 813 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 443 549 - -
Tan01g4281 813 Pfam Protein tyrosine and serine/threonine kinase 477 744 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4281 813 Gene3D Ribonuclease Inhibitor 1 71 IPR032675 -
Tan01g4281 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4281 813 Pfam Malectin domain 213 397 IPR021720 -
Tan01g4281 813 SUPERFAMILY L domain-like 2 172 - -
Tan01g4281 813 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 211 402 - -
Tan01g4281 813 Gene3D - 210 401 - -
Tan01g4281 813 Gene3D Transferase(Phosphotransferase) domain 1 550 767 - -
Tan01g4281 813 Pfam Leucine rich repeat 89 148 IPR001611 GO:0005515(InterPro)
Tan01g4281 813 CDD STKc_IRAK 480 747 - -
Tan01g4281 813 Gene3D Ribonuclease Inhibitor 72 183 IPR032675 -
Tan01g4281 813 SMART serkin_6 474 745 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4281 813 ProSiteProfiles Protein kinase domain profile. 474 760 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4281 813 Gene3D Phosphorylase Kinase; domain 1 441 549 - -
Tan01g4281 813 FunFam Putative LRR receptor-like serine/threonine-protein kinase 550 757 - -
Tan01g4281 813 Pfam Leucine Rich Repeat 18 37 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4277 Tan-Chr1:107599434 Tan01g4281 Tan-Chr1:107599434 0.00E+00 dispersed
Tan01g4279 Tan-Chr1:107599434 Tan01g4281 Tan-Chr1:107599434 4.50E-273 dispersed
Tan01g4281 Tan-Chr1:107599434 Tan01g4284 Tan-Chr1:107670892 0.00E+00 dispersed
Tan01g4280 Tan-Chr1:107599434 Tan01g4281 Tan-Chr1:107599434 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67133 PF07714 PK_Tyr_Ser-Thr 1.50E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4281 - - - 0.0