Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4284 ATGCTTTCGGCTCGATTTCTCACCGTCCTCGCTTTTCTAATATCTCTCTGCTTCATTAGCCTCGCTTCCGCCGCTACTCGGCTCCCGGCCGACGAAGTTGAGGCGTTGAGGGAGATCGGAAAGACATTGGGGAAAACGGACTGGAATTTCACGGGCGATCCATGCGGCGGTTTCAGCAGCGGTTGGATATCGAATTCCGTGCAGTTCGACCCTAGTTTTCTTAATAATGTTACCTGCAACTGCACATTTCAGAACAATACCGTCTGTCACGTCACTAACATTCTTCTAAAAGCGCAGAGTCTTCCAGGTACTCTTCCGCCGCAAATAGTGAGATTGCCTTTCCTGCAGGAACTTGATCTCACCCGCAACTATCTCAGCGGCCCAATTCCTCCAGAATGGGGCTCCACCAACCTTGTCAAAATTTCCCTTCTTGGAAATCGATTGACGGGTCCAATCCCAAAAGCGATTGGAAACATCAGTACTCTTTCAGAATTGGTCCTGGAAATGAATCATTTCTCTGGAAGTGTACCTCCAGAACTTGGAAACTTGCCCAGCTTATCCAGATTACTTCTTACCTCAAACAACTTTTCTGGGGAGCTCCCATCTTCACTGGCAAGGATAGCCTCATTGACGGACTTTCGAATTAGTGATAATCACTTCACAGGCCCAATACCTAAGTTTATACAGAATTGGACGAATCTTGGAAAAGTAGCTATTCAGGCAAGTGGGTTGAGTGGACCAATTCCTTCTGAAATTGGACTTTTGACAAAATTAAACGACGTGAGAATCAGTGACTTGAATGGTGGTCCATCACCCTTTCCACCCGTCAATACTTTGACAAAATTGAAAACCTTGATATTGAGGAGTTGCAATATAACTGGGATGCTGCCCTCCAATCTTGATGGGTTGACATCATTGAAAACCCTAGACTTTAGCTTCAACAAAATTACTGGACCAATACCTGGCAGCTTTGAAGCTTTGAAAAAAGTGGATAACATATATTTAACTGGAAACTTGCTAAATGGATCAGTGCCTCCTTGGATGCTACGGGATGGAGAAAACATTGATATCTCTTATAATAAATTTACTCTGATGAATGCTCAGAACACTGGCTGTCAATCACGAAATCTAAACCTGTTTGCGAGCTCTTCACAGGACAATAATTCTGGAACAGTTTCATGTTTACCGAGCACTTGTAGAAAAACTTGGTACCTTCTTCATATCAACTGTGGGGGGAAGGAAGAATCAATTAACGGAACAATCATATTTAACGGAGACACAAACACTGGCAAATCATCATTGTTTTTTCCAGGTGGAGAAAATTGGGGATTTAGTAACACTGGTAGTTTTATGGATGATGATCGCACAACAGATGACTTTATTGCATTAAATTCATCTGCTCTCTCAATGCCAAATCCTGAATTGTACATGACGGCACGCATTTCTCCAATCTCTCTTACTTATTATGCATATTGCATGGGTAGTGGAAACTACACAGTAAGCCTCCATTTTGCTGAGATAGCGTTTACTAATGACAAATCATACAAAAGCCTTGGCAGACGCTTATTTGATGTCTATATTCAGGGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGCGTTGGAAAACCTTTTGTAAAAAAATTCACGGTTTCTGTGACTAATGGTACTATAGAGATTCGCCTATTTTGGACCGGGAAGGGAACAAATGCAATCCCTGTGAGAGGCGTTTATGGTCCTTTGATTTCTGCCATTTCGGTAGTTCCCGATTTTGTGCCACCATCAGAAGGTGGAAAGGCCATATCTGTCGGTGCAGTGGTTGGAATTGTGGCTGCTGTGGTTTTTGTTATCGTCTTGGTTCTTGGAGTCTTGTGGTGGAGAGGCTGCCTGAGAAAGAAAAGCACACTTGAACAAGAGTTGAAGGGTCTAGATCTAGGAACAGGTTCATTTTCATTAAGACAAATTAGAGATGCCACAAACAATTTTGATGCAGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTCTACAAGGGTGTTCTTGCAGATGGTACTGTAATTGCAGTGAAGCAACTTTCTTCAAAGTCAAAGCAAGGAAATCGCGAATTTGTGAATGAGATAGGCATGATATCTGCGTTGCAACACCCACATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTAATATATGAGTATTTGGAAAATAATAGCCTTGCTCGTGCCTTATTCGGACCTGAGGAATGTCAACTGAAATTGGATTGGCCAACTAGGCACAAGATTTGTGTTGGTATAGCTAGAGGTTTAGCATACCTTCATGAGGAGTCGAGACTAAAGATCGTTCACCGAGACATCAAGGCTACCAATGTTCTGCTGGATAAAAATCTGAACCCCAAGATTTCTGACTTCGGTTTGGCCAAGCTGGATGAAGAAGAAAATACACACATCAGCACACGGGTTGCTGGAACCTTTGGGTATATGGCACCAGAATACGCCATGCGAGGCTACTTAACTGACAAAGCAGATGTTTATAGCTTTGGCATCGTGGCATTGGAAATAGTCAGTGGTCGAAGCAACACAAGTTACCGAACCAAGGACGATTGCTTTTACCTTCTAGACCATGCTAATGCTTTAAAAGAGAAAGACAGTTTACTAGAGCTTGTCGATGCACGGTTAGGCTCTGACTTCAACAAGAGAGAGGCAATGACCATGATCAATATTGCTCTCCAATGTACAAACGTCATTGCAGCGGACAGACCTGCCATGTCATCAGTGGTGAGCATGCTGGAAGGGAAGGTTGCTGTGAAGGAGGTGGTTTCAGATCCTAGTATCTCAAAACAAGATGTGAATGCAATGTGGAGCCAATTGTATCGCCAAAAAGGGCAAACAACGGGCGAGAGCCAGACGCAAAGTATGTCGATGGATGGACCATGGACTGGTTCTTCAACTACTGCCAGCGATCTCTATCCGATCAACATGGATTCTAAGTACTTGGAGAATAGGAACTAG 3033 43.16 MLSARFLTVLAFLISLCFISLASAATRLPADEVEALREIGKTLGKTDWNFTGDPCGGFSSGWISNSVQFDPSFLNNVTCNCTFQNNTVCHVTNILLKAQSLPGTLPPQIVRLPFLQELDLTRNYLSGPIPPEWGSTNLVKISLLGNRLTGPIPKAIGNISTLSELVLEMNHFSGSVPPELGNLPSLSRLLLTSNNFSGELPSSLARIASLTDFRISDNHFTGPIPKFIQNWTNLGKVAIQASGLSGPIPSEIGLLTKLNDVRISDLNGGPSPFPPVNTLTKLKTLILRSCNITGMLPSNLDGLTSLKTLDFSFNKITGPIPGSFEALKKVDNIYLTGNLLNGSVPPWMLRDGENIDISYNKFTLMNAQNTGCQSRNLNLFASSSQDNNSGTVSCLPSTCRKTWYLLHINCGGKEESINGTIIFNGDTNTGKSSLFFPGGENWGFSNTGSFMDDDRTTDDFIALNSSALSMPNPELYMTARISPISLTYYAYCMGSGNYTVSLHFAEIAFTNDKSYKSLGRRLFDVYIQGKLELKDFNIADAAGGVGKPFVKKFTVSVTNGTIEIRLFWTGKGTNAIPVRGVYGPLISAISVVPDFVPPSEGGKAISVGAVVGIVAAVVFVIVLVLGVLWWRGCLRKKSTLEQELKGLDLGTGSFSLRQIRDATNNFDAANKIGEGGFGPVYKGVLADGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEECQLKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTSYRTKDDCFYLLDHANALKEKDSLLELVDARLGSDFNKREAMTMINIALQCTNVIAADRPAMSSVVSMLEGKVAVKEVVSDPSISKQDVNAMWSQLYRQKGQTTGESQTQSMSMDGPWTGSSTTASDLYPINMDSKYLENRN 1010
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107670892 107682563 - Tan0017034.1 Tan01g4284 741708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4284 1010 Pfam Malectin domain 405 589 IPR021720 -
Tan01g4284 1010 FunFam Putative LRR receptor-like serine/threonine-protein kinase 742 949 - -
Tan01g4284 1010 Pfam Protein tyrosine and serine/threonine kinase 669 937 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4284 1010 Gene3D Transferase(Phosphotransferase) domain 1 742 957 - -
Tan01g4284 1010 Gene3D - 402 594 - -
Tan01g4284 1010 SUPERFAMILY Protein kinase-like (PK-like) 650 956 IPR011009 -
Tan01g4284 1010 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 29 267 - -
Tan01g4284 1010 Gene3D Ribonuclease Inhibitor 31 194 IPR032675 -
Tan01g4284 1010 Pfam Leucine Rich Repeat 115 134 IPR001611 GO:0005515(InterPro)
Tan01g4284 1010 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 741 - -
Tan01g4284 1010 Gene3D Ribonuclease Inhibitor 195 266 IPR032675 -
Tan01g4284 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 953 IPR051824 -
Tan01g4284 1010 Gene3D Ribonuclease Inhibitor 267 377 IPR032675 -
Tan01g4284 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4284 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 594 - -
Tan01g4284 1010 Gene3D Phosphorylase Kinase; domain 1 632 741 - -
Tan01g4284 1010 ProSiteProfiles Protein kinase domain profile. 666 917 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4284 1010 CDD STKc_IRAK 672 939 - -
Tan01g4284 1010 SMART serkin_6 666 937 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4284 1010 SUPERFAMILY L domain-like 81 362 - -
Tan01g4284 1010 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515(InterPro)
Tan01g4284 1010 MobiDBLite consensus disorder prediction 968 995 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4265 Tan-Chr1:107404912 Tan01g4284 Tan-Chr1:107670892 0.00E+00 dispersed
Tan01g4269 Tan-Chr1:107419781 Tan01g4284 Tan-Chr1:107670892 2.50E-270 dispersed
Tan01g4272 Tan-Chr1:107481813 Tan01g4284 Tan-Chr1:107670892 1.20E-267 dispersed
Tan01g4275 Tan-Chr1:107571234 Tan01g4284 Tan-Chr1:107670892 0.00E+00 dispersed
Tan01g4278 Tan-Chr1:107599434 Tan01g4284 Tan-Chr1:107670892 2.80E-254 dispersed
Tan01g4280 Tan-Chr1:107599434 Tan01g4284 Tan-Chr1:107670892 0.00E+00 dispersed
Tan01g4281 Tan-Chr1:107599434 Tan01g4284 Tan-Chr1:107670892 0.00E+00 dispersed
Tan01g4284 Tan-Chr1:107670892 Tan02g0112 Tan-Chr2:1115083 2.80E-225 dispersed
Tan01g4288 Tan-Chr1:107736804 Tan01g4284 Tan-Chr1:107670892 1.40E-70 dispersed
Tan01g4283 Tan-Chr1:107649222 Tan01g4284 Tan-Chr1:107670892 5.80E-62 tandem
Tan01g4284 Tan-Chr1:107670892 Tan01g4285 Tan-Chr1:107708313 1.40E-197 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67134 PF07714 PK_Tyr_Ser-Thr 5.60E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4284 - - - 0.0