Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4285 ATGGTCGGAACTTGGGACATGGATTTTGCGGTTCGGAATTTTTTGAAGAGTGTTCGTGTTCTTGTTTTTGGGTTTCTGGTTTTTAACTGCTTCGTGGGATTTGGATCGGACGCACAACCTCTGCCTGAACAAGAAGTGAGAGCCCTTCAAGCAATATCTGCAGAGCTAAGGAACTTAAACTGGAATGTCCACCAAAATTCTTGCATTAATGGCGATGGATTTTCCAATAGAGCTATTGATGGTACAGATATTATCAGAGAGGTGAATTGCACTTGCTCCAATGTTTGCTCAGTCACTAGCATCCAGCTAAAGGGTCTGAATCTAACTGGAACTCTGCCAGCAGCATTTGCAAATCTGACTCAGCTGCGACTGATAGATCTTACTCGAAATTTAATATCCGGATCAATCCCAAGAGAGTTTGCTAGGATTCCTCTTGTTGCGTTATCCATGTTGGGCAATCGGCTAAGTGGTCCGATTCCTCCAGAAATTGGTGACATTGCTACACTTGAGCATCTGGTTTTGGAAGACAATCTCCTTGGAGGAAACCTTCCCGAAAGCCTCGGGAGACTGAGCCGGTTGCAAAGATTACTTCTTAGTGCAAATAATTTCACGGGGTCGATTCCAAACTCTTATGGAAACTTGAGGAACTTGACTGATTTTCGGATCGATGGAAATGATGTATCAGGAAAGCTTCCTGAATTTATTGGCAATTGGACCAAACTTAAGAGACTGGATATCCAAGGAACTTCTATGGAGAATCCGATTCCACGTGGCATATCCGAGTTGAAAAACTTAACTGAACTGAGGATAACTGATTTGAAGGGACCAGCAACAAGTTTTCCCAATTTGACTCATTTGACATCTTTAGAAGAATTGGTCCTAAGAAATTGCTTAATCGAGGATCGTATTCCTGGATATATTGGACTGTTTAGTAGATTAAAAACTTTAGATCTAAGCTTCAATGAATTGAATGGTCCAATTCCAGACTCATTTCAGAATCTTGAAAGAGTTACTCAGTTCTTGTTTTTGACCAACAACTCATTAAGTGGCCAAGTACCAAGCTGGATTTTGAACAGTGAAAGGAGCATAGATTTGTCTTACAACAATTTTACAGGGTCCCCTGTTTCTAGTTGTCAACAGTCTGATGTGAACTTGGTTTCAAGTTATTCAACTACAATGAATGAAAATGTTGCTTGGTGCTTGAGGAAGGATCTCCCTTGTCCTAGAGAAACTCGATTTCATTCCTTGTTCATAAATTGTGGAGGCCAAAGAATGGAGCTTGATGGTAATGAATATGAAGAGGATGTAACTGTAGGTGGCAAGTCCAATTTCCTTTCTTTTTCAGACAGATGGGCTTATAGCAGCACTGGTGTTTTCCTGGGAAAGGAGGATGCTGATTACAGAGTAACAAGTAGCAACACGTCTATTACGGGCATCTATCGAACCGCTCGACTCGCACCTCTTTCGCTTAAGTACTACGGACTTTGCTTAAGAAGAGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTATACTGCTGACCAAACATTCAGCAGCTTGGGAGAGCGCATATTTGATATCTCAATTCAAGGAAATTTGGTTAGAAAAGATTTTAACATAATGGAGGAAGCTGGTGGTATTGGTAACAGTTTTATTTTGGAAGAGCCTAATATTTTGGTGAATGGAAGTACTCTTGAGATCCACTTGTATTGGGCTGGTAAAGGAACAACTGCCATTCCAAACAGAGGGGTTTATGGACCTCTGATATCTGGGATCACAGTGACACCAAATTTTGATGTGGAGACTGGAGTGCTATCAGCTGGAGAGATTGCTGGAGTTGTTGTTGGTTGTTTTGTGTTTGTTGTGTTGGTATTGGCTGTTCTTAGATGGAAAGGTTGCTTGGGTGGAAAGGACACTGAAGACAGTGAATTGAAGGCCCTAGATTTACAGACAGGTTATTTCAGTTTGAGACAAATCAAAGCAGCCACCAAGAACTTCGACCCGACATACAAGATAGGCGAGGGAGGTTTCGGTCCGGTCTACAAGGGAGTATTGTCAGATGGTACTTCAATTGCTGTAAAACAGCTATCCTCTAAATCAAGGCAAGGCAACCGTGAATTCGTGACCGAGATCGGCATGATATCAGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAACCAGTTATTGCTTATATATGAATATCTAGAGAACAATAGTCTTGCTCGTGCCCTTTTTGGCTCTGAGGAGCACCGACTACACTTGGATTGGGCTATAAGAATGAAGATATGCTTGGGAATAGCAAAGGGATTGGCTTACCTTCATGAAGAATCTGTATTGAAAATTGTTCATAGAGATATTAAAGCTACCAATGTGCTACTTGATAAAAATTTGAATGCCAAGATTTCTGATTTTGGGTTGGCTAGACTTGATGAAGAGGAGAACACCCATATCAGCACAAGAATTGCTGGCACAATAGGTTATATGGCTCCTGAATATGCTATGAGAGGTTACTTGACTGATAAGGCAGATGTTTATAGCTTTGGAGTTGTGGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAATTATAGGCCAAAGGAGGAATTTGTTTATCTTCTCGACTGGGCTTATGTTCTACAAGAGCAAGGAAACCTTCTCGAACTTGTTGATCCGAGTCTTGACTCACATTACTCAAAAGAAGAGGTCATGAGGATGATTCATATAGCTCTCTTATGCACAAATCCGTCGCCAACTCTAAGGCCATCAATGTCGTCTGTGGTTAGCATGCTCGAAGGCAAAATTGCGGTCCAAGCACCGATCATCAAGCGCAGTACAGTCGATCAAGACGCAAGGTTCAAAGCCTTTGAAAGGTTGTCACAAGATAGCATAACAAGCATTTCAACATCATCACAAGGCATTCCAATGCAAAAAAGCATGTTAATTGATGGGCCTTGGATTGACTCTTCTACTTCTACCCAAAACAAGGACGAGACTCGAGATTATTCTTCAACCGGAAACCTGATTTAG 3054 41.13 MVGTWDMDFAVRNFLKSVRVLVFGFLVFNCFVGFGSDAQPLPEQEVRALQAISAELRNLNWNVHQNSCINGDGFSNRAIDGTDIIREVNCTCSNVCSVTSIQLKGLNLTGTLPAAFANLTQLRLIDLTRNLISGSIPREFARIPLVALSMLGNRLSGPIPPEIGDIATLEHLVLEDNLLGGNLPESLGRLSRLQRLLLSANNFTGSIPNSYGNLRNLTDFRIDGNDVSGKLPEFIGNWTKLKRLDIQGTSMENPIPRGISELKNLTELRITDLKGPATSFPNLTHLTSLEELVLRNCLIEDRIPGYIGLFSRLKTLDLSFNELNGPIPDSFQNLERVTQFLFLTNNSLSGQVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNENVAWCLRKDLPCPRETRFHSLFINCGGQRMELDGNEYEEDVTVGGKSNFLSFSDRWAYSSTGVFLGKEDADYRVTSSNTSITGIYRTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTADQTFSSLGERIFDISIQGNLVRKDFNIMEEAGGIGNSFILEEPNILVNGSTLEIHLYWAGKGTTAIPNRGVYGPLISGITVTPNFDVETGVLSAGEIAGVVVGCFVFVVLVLAVLRWKGCLGGKDTEDSELKALDLQTGYFSLRQIKAATKNFDPTYKIGEGGFGPVYKGVLSDGTSIAVKQLSSKSRQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFGSEEHRLHLDWAIRMKICLGIAKGLAYLHEESVLKIVHRDIKATNVLLDKNLNAKISDFGLARLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLDSHYSKEEVMRMIHIALLCTNPSPTLRPSMSSVVSMLEGKIAVQAPIIKRSTVDQDARFKAFERLSQDSITSISTSSQGIPMQKSMLIDGPWIDSSTSTQNKDETRDYSSTGNLI 1017
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107708313 107721815 + Tan0010517.1 Tan01g4285 741709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4285 1017 MobiDBLite consensus disorder prediction 993 1017 - -
Tan01g4285 1017 SUPERFAMILY L domain-like 58 395 - -
Tan01g4285 1017 CDD STKc_IRAK 674 941 - -
Tan01g4285 1017 Gene3D - 414 599 - -
Tan01g4285 1017 Pfam Leucine Rich Repeat 312 334 IPR001611 GO:0005515(InterPro)
Tan01g4285 1017 Pfam Leucine Rich Repeat 192 214 IPR001611 GO:0005515(InterPro)
Tan01g4285 1017 Gene3D Ribonuclease Inhibitor 235 397 IPR032675 -
Tan01g4285 1017 ProSiteProfiles Protein kinase domain profile. 668 950 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4285 1017 Pfam Malectin domain 416 594 IPR021720 -
Tan01g4285 1017 SMART serkin_6 668 939 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4285 1017 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 413 599 - -
Tan01g4285 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 208 274 - -
Tan01g4285 1017 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 637 743 - -
Tan01g4285 1017 Gene3D Phosphorylase Kinase; domain 1 637 743 - -
Tan01g4285 1017 SUPERFAMILY Protein kinase-like (PK-like) 652 954 IPR011009 -
Tan01g4285 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4285 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase 744 951 - -
Tan01g4285 1017 Gene3D Ribonuclease Inhibitor 167 234 IPR032675 -
Tan01g4285 1017 Gene3D Ribonuclease Inhibitor 46 166 IPR032675 -
Tan01g4285 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 28 965 IPR051824 -
Tan01g4285 1017 Gene3D Transferase(Phosphotransferase) domain 1 744 959 - -
Tan01g4285 1017 Pfam Protein tyrosine and serine/threonine kinase 673 939 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0913 Tan-Chr1:8678425 Tan01g4285 Tan-Chr1:107708313 0.00E+00 dispersed
Tan01g4285 Tan-Chr1:107708313 Tan01g4289 Tan-Chr1:107748741 0.00E+00 dispersed
Tan01g4284 Tan-Chr1:107670892 Tan01g4285 Tan-Chr1:107708313 1.40E-197 tandem
Tan01g4285 Tan-Chr1:107708313 Tan01g4286 Tan-Chr1:107708313 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67135 PF07714 PK_Tyr_Ser-Thr 3.40E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4285 - - - 0.0