Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4289 ATGGATTTTTCTACTTGGGAATCGAAGACAGTTCATGCTCGTGTTCTTGTCTGTGTGTTGCTGCTTTTCAGCTGCTTCATGGAATTTGGACTGGATGCCCAACCTTTGCCTGAACATGAAGTGAAAGCCCTCGAAGCAATATCTGCAGCGCTAAAGAACTTAAATTGGAAGGTCCATCAAAATTCTTGCATCAATGGCGACGGATTTTTCAACCAAGTTATTGATGGCGATAGAATCATCAGAGAGGTGAACTGCACTTGCTCCACTGATTCTTGCAGTGTCACCACCATCCGGCTAAAGCGTCTGAACTTAGGTGGAGTTCTTCCAGCAGCATTTGGAAATCTTACTAAGCTGACACTTTTAGATCTCACTCGCAATTTTATATCCGGACCAATTCCTAGAGAGTTTGGTCGCATTCCTCTGGTTGTGTTTACCATGCAGGGAAATCGACTCAGTGGTCAGATTCCTCAAGAAATTGGTGATGTTGCTTCACTTAAGGAACTGATTTTGGAAAACAATCAACTTGAAGGAAATCTTCCTGAAAGCCTTGGCAAACTAAGCCGCTTGCAAAGACTACTTCTTTCTGCCAATAATTTCACAGGGTCCATTCCAGAATCTTATGGAAACTTGAGCAACTTGACTGATTTTCGGATAGATGGAAATGATATATCAGGAAAGTTACCTGAATTCATTGGCAACTGGACCAAACTTCAAAAACTGGACATCCAAGGAACTTCTATGGAGACTCCTATTCCTCGTGCCATATCCGAGTTGAAAAATTTAACCCAACTGAGGATAACCGATTTGAAGGGACTGCCAACAAGATTTCCTAATTTGACTCTGTTGACATCTTTACAAGAATTAAATTGCTTAATCGAGGATCGTATTCCGGAATATATTGGAGAGTTTAATGTATTAAGAACTCTAGATCTAAGCCTCAACAGATTGAGTGGGCCAATTCCAGAGACATTTAATAATCTGTTGACCCAAAGAACTCAGTTTCTGGCTAGCAATTCTTTAAGCGGCCAAATACCGAACTGGATTATGAACAGCTCAAGGAACATAGATTTATCTTACAACAATTTTACTGGGTCGCTTTTTACCAATTGTCAGCGGTCTGATGTGAACTTGGTTTCAAGTTGCTCGACTACCATGAATGAAATAGAGATAGATTGGTGCATGAGGAAGGATCTCCCTTGCCCAAGAGAAGCTCGATTTGATTCATTGTTCATTAACTGTGGAGGAAAAAGCATGAAGTTTGATGGAAATGAATACGAAGGCGAGTCGACGACAACCAACGGTCGAAAATCGAGTTCGTATGATTTTTCAAAAGAAAGATGGGGTTACAGTAGTACTGGTTTTTTCTCTGGAAATGATAGCCTTCCTTACACAGTTACAAATAATACCTCTGCTGTCTCAGCTTTAGACATCTATGACACTGCTCGAATTGCTCCTGTTTCGCTTAAGTACTATGGATTTTGCTTGAGAAATGGAAGTTATAATGTCAAGCTTCACTTTGCTGAAATTATGTTTACTCAACACCAAGCCTTTAGTAGCCTGGGAAAGCGCATATTTGATATCTCTATTCAAGGAAACTTGATTGAAAAAGATTTCAACATAATGGAGAAAGCTCGAGGTGTTGGTAAGAGGTTTATTTTGGAAGAGCATAATATTATAGTGAATGGAAGCACTCTTGAAATCCACTTATATTGGGCTGGTAAAGGAACAAATGCCATTCCAGTGAGAGGGGTTTATGGACCTCTAATATCTGCAATTACAGTGACACCCAAACTTCGAGACCTAAAGTTACAGACAGGTTATTTTAGTTTAAGACAAATCAAAGCAGCCACCAAAAACTTTGACTCTGCAAATAAGATAGGCGAGGGAGGTTTTGGTCCTGTCTACAAGGGAGTACTGTCGGATGGCACTTCGATAGCTGTAAAGCAGCTGTCCTCTAAATCGAAGCAAGGAAACCGCGAATTCATCACTGAGATCGGCATGATATCAGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGACACCAATTATTGCTTATTTATGAGTATCTTGAGAACAATAGTCTTGCTCGTGCACTTTTTGGCCCTGAGGAGCACTCACTGCATTTGGATTGGCCGGTAAGAATGAAGATATGCTTGGGAATAGCAAAAGGGTTGGCTTACCTTCATGAAGAATCTAGATTAAAAATTGTTCACAGAGATATAAAAGCTACCAATGTGTTGCTTGATGAAAATCTGAATGCCAAGATCTCAGACTTTGGGTTGGCTAAGCTTGATGAAGAGGAGAACACTCATATCAGCACAAGAATTGCTGGCACAATAGGTTATATGGCTCCGGAGTACGCAACGAGGGGTTATTTGACTGATAAAGCTGATGTTTATAGCTTTGGAGTTGTGGCATTAGAAATTGTTAGTGGAAAAAGCAACACAAATTACAGACCAAAAGAAGAGTTTGTTTATCTTCTTGACTGGGCTATTGTTCTACAAGAAGAAGGAAAGCTACTGGAACTTGTTGATCCGAATCTTGGCTCAGAATACTCAAAAGAAGAAGTCATGAGGATGCTTCATATCGCTCTCGTATGCACGAACCTATCTCCGACTCTCCGACCATCGATGTCGTCTGTGGTTAGCATGCTTGAAGGTAAAATTCCAATTGAAGTAGGGAAGATCAAGCGTAATGTAGCGGATCGAGATCGAGATCGAGATGCAAGGTTCAAAGCCTTTGAAAAGTTGTCACAAGACAGCCTAACAAGCATTTCAACCACATCGCAAGGCATTCAAATGCAGAATAGCATGTTAATGGATGGACCATGGATTGATTCATCATCTACTTCTACCCAAAACAAGGACGAGACTCGAGATTATTCTTCAACCAGAAGTCTCCTTCGAGATTGA 2931 40.5 MDFSTWESKTVHARVLVCVLLLFSCFMEFGLDAQPLPEHEVKALEAISAALKNLNWKVHQNSCINGDGFFNQVIDGDRIIREVNCTCSTDSCSVTTIRLKRLNLGGVLPAAFGNLTKLTLLDLTRNFISGPIPREFGRIPLVVFTMQGNRLSGQIPQEIGDVASLKELILENNQLEGNLPESLGKLSRLQRLLLSANNFTGSIPESYGNLSNLTDFRIDGNDISGKLPEFIGNWTKLQKLDIQGTSMETPIPRAISELKNLTQLRITDLKGLPTRFPNLTLLTSLQELNCLIEDRIPEYIGEFNVLRTLDLSLNRLSGPIPETFNNLLTQRTQFLASNSLSGQIPNWIMNSSRNIDLSYNNFTGSLFTNCQRSDVNLVSSCSTTMNEIEIDWCMRKDLPCPREARFDSLFINCGGKSMKFDGNEYEGESTTTNGRKSSSYDFSKERWGYSSTGFFSGNDSLPYTVTNNTSAVSALDIYDTARIAPVSLKYYGFCLRNGSYNVKLHFAEIMFTQHQAFSSLGKRIFDISIQGNLIEKDFNIMEKARGVGKRFILEEHNIIVNGSTLEIHLYWAGKGTNAIPVRGVYGPLISAITVTPKLRDLKLQTGYFSLRQIKAATKNFDSANKIGEGGFGPVYKGVLSDGTSIAVKQLSSKSKQGNREFITEIGMISALQHPNLVKLYGCCIEGHQLLLIYEYLENNSLARALFGPEEHSLHLDWPVRMKICLGIAKGLAYLHEESRLKIVHRDIKATNVLLDENLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYATRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAIVLQEEGKLLELVDPNLGSEYSKEEVMRMLHIALVCTNLSPTLRPSMSSVVSMLEGKIPIEVGKIKRNVADRDRDRDARFKAFEKLSQDSLTSISTTSQGIQMQNSMLMDGPWIDSSSTSTQNKDETRDYSSTRSLLRD 976
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 107748741 107795212 + Tan0018748.1 Tan01g4289 741713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4289 976 Pfam Leucine Rich Repeat 306 327 IPR001611 GO:0005515(InterPro)
Tan01g4289 976 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515(InterPro)
Tan01g4289 976 Pfam Leucine Rich Repeat 164 186 IPR001611 GO:0005515(InterPro)
Tan01g4289 976 Pfam Leucine Rich Repeat 117 138 IPR001611 GO:0005515(InterPro)
Tan01g4289 976 CDD STKc_IRAK 626 893 - -
Tan01g4289 976 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 919 IPR051824 -
Tan01g4289 976 Pfam Malectin domain 409 592 IPR021720 -
Tan01g4289 976 SMART serkin_6 620 891 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4289 976 MobiDBLite consensus disorder prediction 946 976 - -
Tan01g4289 976 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 203 270 - -
Tan01g4289 976 FunFam Putative LRR receptor-like serine/threonine-protein kinase 696 903 - -
Tan01g4289 976 SUPERFAMILY L domain-like 83 370 - -
Tan01g4289 976 ProSiteProfiles Protein kinase domain profile. 620 895 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4289 976 Gene3D Phosphorylase Kinase; domain 1 596 695 - -
Tan01g4289 976 Gene3D Transferase(Phosphotransferase) domain 1 696 909 - -
Tan01g4289 976 MobiDBLite consensus disorder prediction 946 963 - -
Tan01g4289 976 Gene3D Ribonuclease Inhibitor 37 267 IPR032675 -
Tan01g4289 976 Gene3D - 408 595 - -
Tan01g4289 976 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 89 179 - -
Tan01g4289 976 Gene3D Ribonuclease Inhibitor 268 382 IPR032675 -
Tan01g4289 976 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 590 695 - -
Tan01g4289 976 SUPERFAMILY Protein kinase-like (PK-like) 604 894 IPR011009 -
Tan01g4289 976 Pfam Protein tyrosine and serine/threonine kinase 623 890 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4289 976 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 406 597 - -
Tan01g4289 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4285 Tan-Chr1:107708313 Tan01g4289 Tan-Chr1:107748741 0.00E+00 dispersed
Tan01g4286 Tan-Chr1:107708313 Tan01g4289 Tan-Chr1:107748741 6.70E-244 dispersed
Tan01g4287 Tan-Chr1:107708313 Tan01g4289 Tan-Chr1:107748741 1.00E-160 dispersed
Tan01g4289 Tan-Chr1:107748741 Tan02g0112 Tan-Chr2:1115083 3.20E-210 dispersed
Tan01g4288 Tan-Chr1:107736804 Tan01g4289 Tan-Chr1:107748741 2.30E-97 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67138 PF07714 PK_Tyr_Ser-Thr 2.10E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4289 - - - 0.0