Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4377 ATGTCTGATGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGGTTTAGCTCTTTGGAACTTATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCTATCAAAGTTATCGATTTAGAAGAATCTGAGGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTTTTGTCACAATGTCGATCGCCCTACATTACCGAGTATTATGGTTCTTATCTCCACCAGACGAAGTTATGGATAATAATGGAATATATGGCTGGGGGCTCTGTTGCAGATCTGTTGCAGTCTGGGCCACCGCTTGATGAAATGTCAATTGCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACACTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAATTCTGAAGGATATAATGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCCCCACTAGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTGGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGGCCTAGTGCCAAAGAGCTTCTGAAGCATCGATTTATTAAGAATGCCAGGAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGAAGATGTTGAAACACCAACTAATGGTCCTAGAGCCATAGGTGAAACGTCCGACACGGTGAAAGTATCAAGAAATTTAAGAGAAGAAACTGTTCGTGCCAGCAACCAGAGTAAAACTCCAAAGAACGCGGGATGGGACTTTAGCATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGCTCAGGCTGCGCCTAGTAGAGTTTCCGAGAGTGGTAACTGGCTAGCTGCATCTGCAAATGCACCGCGTGACATAGCAGAAAACGCTAGAGATTCATACAGTATGGGGGATGCAAGTGAAGATGAAGAGTTATCTGTAAGTGGTTCAGGAACTGTCGTGATCCGGTCTCCCAGGGGATCTCAAGCATCTACTCAATTTCATAATGAAAGCAATCCGTCTGGAAGTGCACAAGCATATTTTGAGGACACATCTCTTAGTGGTACTGTTGTTATGCGTGGACAACGTGATGATCCCGATTCTCCTCGGACTCCTAAATCCAGATTGGGAACTCAAGAAAAGACTTCAAGTTTGTCTCCTGAAGATAGTGCATTTAACCTTGCGGAGGCAAAGGCTGCAATTCAAGCAGGATTGAAGAAAGCTAATGTAAGGGAAAGATCAGCTCCCCATAAACTCAACGACAGGAAGGAAAATAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCGAGGCATTCTCGTGAATTCTTTGATGCACAAAGAGCATTGCCAAAACCATGTCTATCAATTGATGATGAAGAAAGTGCAAAAATAGCATTGTCTTCTGCACCTTTATCAATTTTGTTTATGTCATCCTTGAAAGAGGTAGTTGCGGATGATTCTGAAGGATCACCTTCTCGTACTGTAATTAATGCACTTATAAATATGGAACACCTAAAACCTGGATCATGTGAGGTTCTTGTTACCAAGTTGTTACAGAAATTGGCCAGTTCCAAAGAATCTTCTCTGAAAGATTTACAAGACTTGGCAACTCGCTTATTCACCAAGGCAAAGACAGATCCTGAAGACATACAAAATGTCGCAGATTCTGATAGCAGCAAAAAGCAACCAAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCACGAGATCTGAGTCCAGCTTAG 2085 42.21 MSDVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKEDVETPTNGPRAIGETSDTVKVSRNLREETVRASNQSKTPKNAGWDFSIGGPHSTGTVRSVVKPPQIRERKPEIPYAQAAPSRVSESGNWLAASANAPRDIAENARDSYSMGDASEDEELSVSGSGTVVIRSPRGSQASTQFHNESNPSGSAQAYFEDTSLSGTVVMRGQRDDPDSPRTPKSRLGTQEKTSSLSPEDSAFNLAEAKAAIQAGLKKANVRERSAPHKLNDRKENRRTEQTVSSSDSSRHSREFFDAQRALPKPCLSIDDEESAKIALSSAPLSILFMSSLKEVVADDSEGSPSRTVINALINMEHLKPGSCEVLVTKLLQKLASSKESSLKDLQDLATRLFTKAKTDPEDIQNVADSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 108689719 108711737 - Tan0012358.1 Tan01g4377 741801

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4377 694 Coils Coil 41 68 - -
Tan01g4377 694 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 291 376 - -
Tan01g4377 694 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 13 659 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Tan01g4377 694 MobiDBLite consensus disorder prediction 646 663 - -
Tan01g4377 694 CDD STKc_MST3_like 14 287 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 646 669 - -
Tan01g4377 694 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Tan01g4377 694 SUPERFAMILY Protein kinase-like (PK-like) 13 329 IPR011009 -
Tan01g4377 694 MobiDBLite consensus disorder prediction 318 332 - -
Tan01g4377 694 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4377 694 MobiDBLite consensus disorder prediction 469 485 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 455 485 - -
Tan01g4377 694 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4377 694 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Tan01g4377 694 SMART serkin_6 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4377 694 MobiDBLite consensus disorder prediction 397 443 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 409 443 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 507 527 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 502 541 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4377 K08838 - - csv:101214412 1249.57
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4377 Tan-Chr1:108689719 Tan04g0983 Tan-Chr4:8894177 5.30E-66 dispersed
Tan06g2440 Tan-Chr6:76856225 Tan01g4377 Tan-Chr1:108689719 4.00E-23 dispersed
Tan01g4377 Tan-Chr1:108689719 Tan11g0629 Tan-Chr11:5528399 8.50E-56 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan01g4377 . 1 692 MAP Kinase Kinase Kinase Kinase AT1G53165 62.9 3.3e-225 778.9
Tan04g0983 . 268 533 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.4e-66 251.1
Tan04g0984 . 268 533 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.4e-66 251.1
Tan04g0985 . 268 533 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.4e-66 251.1
Tan04g0986 . 268 533 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.4e-66 251.1
Tan01g4377 . 1 691 MAP Kinase Kinase Kinase Kinase AT3G15220 65.1 1.4e-231 800.0
Tan04g0983 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 1.1e-66 252.3
Tan04g0984 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 1.1e-66 252.3
Tan04g0985 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 1.1e-66 252.3
Tan04g0986 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 1.1e-66 252.3
Tan04g0983 . 4 846 MAP Kinase Kinase Kinase Kinase AT1G69220 59.0 8.2e-244 840.9
Tan04g0984 . 4 846 MAP Kinase Kinase Kinase Kinase AT1G69220 59.0 8.2e-244 840.9
Tan04g0985 . 4 846 MAP Kinase Kinase Kinase Kinase AT1G69220 59.0 8.2e-244 840.9
Tan04g0986 . 4 846 MAP Kinase Kinase Kinase Kinase AT1G69220 59.0 8.2e-244 840.9
Tan01g4377 . 23 268 MAP Kinase Kinase Kinase Kinase AT1G69220 51.8 4.3e-67 253.8
Tan11g0629 . 1 663 MAP Kinase Kinase Kinase Kinase AT5G14720 65.8 1.4e-249 859.8
Tan07g1361 . 6 622 MAP Kinase Kinase Kinase Kinase AT5G14720 55.9 3.1e-188 656.0
Tan11g0630 . 15 536 MAP Kinase Kinase Kinase Kinase AT5G14720 61.8 1.2e-174 610.9
Tan01g2286 . 7 705 MAP Kinase Kinase Kinase Kinase AT4G24100 65.9 3.2e-247 852.0
Tan01g2287 . 7 725 MAP Kinase Kinase Kinase Kinase AT4G24100 65.0 7.1e-247 850.9
Tan07g1361 . 6 354 MAP Kinase Kinase Kinase Kinase AT4G24100 64.2 9.9e-132 468.4
Tan01g2286 . 11 706 MAP Kinase Kinase Kinase Kinase AT4G10730 66.2 6.1e-248 854.4
Tan01g2287 . 11 726 MAP Kinase Kinase Kinase Kinase AT4G10730 64.7 9.8e-246 847.0
Tan07g1361 . 7 375 MAP Kinase Kinase Kinase Kinase AT4G10730 62.9 3.5e-134 476.5
Tan07g1361 . 7 351 MAP Kinase Kinase Kinase Kinase AT1G70430 69.3 9.0e-139 491.5
Tan04g2490 . 4 492 MAP Kinase Kinase Kinase Kinase AT1G70430 50.7 1.0e-129 461.5
Tan01g2286 . 5 398 MAP Kinase Kinase Kinase Kinase AT1G70430 55.2 1.4e-118 424.5
Tan01g2287 . 5 369 MAP Kinase Kinase Kinase Kinase AT1G70430 57.6 3.0e-118 423.3
Tan04g2490 . 1 680 MAP Kinase Kinase Kinase Kinase AT1G79640 59.8 5.7e-219 758.1
Tan07g1361 . 6 353 MAP Kinase Kinase Kinase Kinase AT1G79640 69.0 5.8e-147 518.8
Tan11g0629 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.8 4.5e-104 375.9
Tan07g1361 . 5 327 MAP Kinase Kinase Kinase Kinase AT1G23700 58.0 2.8e-98 356.7
Tan04g2490 . 6 324 MAP Kinase Kinase Kinase Kinase AT1G23700 51.2 6.1e-85 312.4
Tan01g2286 . 17 306 MAP Kinase Kinase Kinase Kinase AT1G23700 51.5 7.4e-75 278.9
Tan01g2287 . 17 306 MAP Kinase Kinase Kinase Kinase AT1G23700 51.5 7.4e-75 278.9
Tan11g0630 . 15 201 MAP Kinase Kinase Kinase Kinase AT1G23700 57.4 2.0e-51 201.1
Tan10g0722 . 32 507 MAP Kinase Kinase Kinase Kinase AT4G14480 57.6 3.9e-140 495.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005838 1 3 1 1 1 0 2 1 0 1 1 1 2 1 1 2 0 3 2 1 1 1 1 1 1 1 1 2 1 1 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67139 PF00069 Pkinase 6.40E-68 CL0016 Tan PK