Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4377 ATGTCTGATGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGGTTTAGCTCTTTGGAACTTATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCTATCAAAGTTATCGATTTAGAAGAATCTGAGGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTTTTGTCACAATGTCGATCGCCCTACATTACCGAGTATTATGGTTCTTATCTCCACCAGACGAAGTTATGGATAATAATGGAATATATGGCTGGGGGCTCTGTTGCAGATCTGTTGCAGTCTGGGCCACCGCTTGATGAAATGTCAATTGCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACACTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAATTCTGAAGGATATAATGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCCCCACTAGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTGGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGGCCTAGTGCCAAAGAGCTTCTGAAGCATCGATTTATTAAGAATGCCAGGAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGAAGATGTTGAAACACCAACTAATGGTCCTAGAGCCATAGGTGAAACGTCCGACACGGTGAAAGTATCAAGAAATTTAAGAGAAGAAACTGTTCGTGCCAGCAACCAGAGTAAAACTCCAAAGAACGCGGGATGGGACTTTAGCATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGCTCAGGCTGCGCCTAGTAGAGTTTCCGAGAGTGGTAACTGGCTAGCTGCATCTGCAAATGCACCGCGTGACATAGCAGAAAACGCTAGAGATTCATACAGTATGGGGGATGCAAGTGAAGATGAAGAGTTATCTGTAAGTGGTTCAGGAACTGTCGTGATCCGGTCTCCCAGGGGATCTCAAGCATCTACTCAATTTCATAATGAAAGCAATCCGTCTGGAAGTGCACAAGCATATTTTGAGGACACATCTCTTAGTGGTACTGTTGTTATGCGTGGACAACGTGATGATCCCGATTCTCCTCGGACTCCTAAATCCAGATTGGGAACTCAAGAAAAGACTTCAAGTTTGTCTCCTGAAGATAGTGCATTTAACCTTGCGGAGGCAAAGGCTGCAATTCAAGCAGGATTGAAGAAAGCTAATGTAAGGGAAAGATCAGCTCCCCATAAACTCAACGACAGGAAGGAAAATAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCGAGGCATTCTCGTGAATTCTTTGATGCACAAAGAGCATTGCCAAAACCATGTCTATCAATTGATGATGAAGAAAGTGCAAAAATAGCATTGTCTTCTGCACCTTTATCAATTTTGTTTATGTCATCCTTGAAAGAGGTAGTTGCGGATGATTCTGAAGGATCACCTTCTCGTACTGTAATTAATGCACTTATAAATATGGAACACCTAAAACCTGGATCATGTGAGGTTCTTGTTACCAAGTTGTTACAGAAATTGGCCAGTTCCAAAGAATCTTCTCTGAAAGATTTACAAGACTTGGCAACTCGCTTATTCACCAAGGCAAAGACAGATCCTGAAGACATACAAAATGTCGCAGATTCTGATAGCAGCAAAAAGCAACCAAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCACGAGATCTGAGTCCAGCTTAG 2085 42.21 MSDVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKEDVETPTNGPRAIGETSDTVKVSRNLREETVRASNQSKTPKNAGWDFSIGGPHSTGTVRSVVKPPQIRERKPEIPYAQAAPSRVSESGNWLAASANAPRDIAENARDSYSMGDASEDEELSVSGSGTVVIRSPRGSQASTQFHNESNPSGSAQAYFEDTSLSGTVVMRGQRDDPDSPRTPKSRLGTQEKTSSLSPEDSAFNLAEAKAAIQAGLKKANVRERSAPHKLNDRKENRRTEQTVSSSDSSRHSREFFDAQRALPKPCLSIDDEESAKIALSSAPLSILFMSSLKEVVADDSEGSPSRTVINALINMEHLKPGSCEVLVTKLLQKLASSKESSLKDLQDLATRLFTKAKTDPEDIQNVADSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 108689719 108711737 - Tan0012358.1 Tan01g4377 741801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4377 694 Coils Coil 41 68 - -
Tan01g4377 694 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 291 376 - -
Tan01g4377 694 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 13 659 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Tan01g4377 694 MobiDBLite consensus disorder prediction 646 663 - -
Tan01g4377 694 CDD STKc_MST3_like 14 287 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 646 669 - -
Tan01g4377 694 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Tan01g4377 694 SUPERFAMILY Protein kinase-like (PK-like) 13 329 IPR011009 -
Tan01g4377 694 MobiDBLite consensus disorder prediction 318 332 - -
Tan01g4377 694 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4377 694 MobiDBLite consensus disorder prediction 469 485 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 455 485 - -
Tan01g4377 694 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4377 694 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Tan01g4377 694 SMART serkin_6 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4377 694 MobiDBLite consensus disorder prediction 397 443 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 409 443 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 507 527 - -
Tan01g4377 694 MobiDBLite consensus disorder prediction 502 541 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4377 Tan-Chr1:108689719 Tan04g0983 Tan-Chr4:8894177 5.30E-66 dispersed
Tan06g2440 Tan-Chr6:76856225 Tan01g4377 Tan-Chr1:108689719 4.00E-23 dispersed
Tan01g4377 Tan-Chr1:108689719 Tan11g0629 Tan-Chr11:5528399 8.50E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67139 PF00069 Pkinase 6.40E-68 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4377 K08838 - csv:101214412 1249.57