Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g4380 | ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTGGGTTCGTCAGATCCAGACTCTGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGAAAATCAAATCATGCCATGGAAGATTATGTGGTTGCAGATTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATGCTATCCCTGATTATTTACAGTCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAATGCAATCAGGAAAGCATACAGGGAAACTGATGTTTACATTTTGGAGAAGGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACAGCCATATTGATAGACTGTAAGAAACTAGTAGTTGGGAATGTGGGGGACTCCCGTGCAGTTATCTGCAGGAACGGTAAGGCCAGCCAATTATCAGTCGATCATGAGCCAAGCGTTGAAAGAAAAAGCATTGAGGGCAGAGGTGGTTTTGTAACAAGCTTTCCTGGGGACGTTCCACGCGTTGACGGGCAGTTGGCGGTCGCAAGGGCATTTGGTGATAGGAGCTTAAAGATGCACTTGAGCTCAGAGCCTGATGTGGTAGAGGAGATGATAGATGGTGAGACCGAGTTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTGATGTCGAACGAAGAAGCCGTAGAGTCTATCAGGCATATAAAAGACGCTCATGCAGCTGCCAAGCACTTGACTGAGGAGGCCCTCAAGAGGAAAAGCAAAGATGATATTTCTTGTATAGTTGTGAGATTTCACTGA | 852 | 44.01 | MTGKEILHKMKEKVGLGSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVADFKQVDHHELGLFAIFDGHLSNAIPDYLQSHLFSNIINEPDFWTDPKNAIRKAYRETDVYILEKAVDFSHGGSTAVTAILIDCKKLVVGNVGDSRAVICRNGKASQLSVDHEPSVERKSIEGRGGFVTSFPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVVEEMIDGETEFVILASDGLWKVMSNEEAVESIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 108802212 | 108805459 | + | Tan0006621.1 | Tan01g4380 | 741804 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g4380 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
Tan01g4380 | 283 | Pfam | Protein phosphatase 2C | 48 | 275 | IPR001932 | - | |
Tan01g4380 | 283 | SUPERFAMILY | PP2C-like | 31 | 283 | IPR036457 | - | |
Tan01g4380 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
Tan01g4380 | 283 | PANTHER | PROTEIN PHOSPHATASE | 31 | 280 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Tan01g4380 | 283 | CDD | PP2Cc | 43 | 282 | IPR001932 | - | |
Tan01g4380 | 283 | FunFam | Probable protein phosphatase 2C 39 | 25 | 283 | - | - | |
Tan01g4380 | 283 | Gene3D | - | 30 | 283 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4380 | Tan-Chr1:108802212 | Tan02g0201 | Tan-Chr2:1718196 | 1.40E-97 | dispersed | |
Tan11g1206 | Tan-Chr11:9994268 | Tan01g4380 | Tan-Chr1:108802212 | 6.20E-48 | transposed | |
Tan01g4380 | Tan-Chr1:108802212 | Tan02g0200 | Tan-Chr2:1718196 | 8.10E-106 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g4380 | K17506 | - | csv:101215129 | 510.76 |