Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g4385 | ATGGCGTCCCTCAGATCTCTCTCCCTCTCTCTCTGCATTCTCTTCCCCTGTTTTTTCACTCTCTCTCAAGCCTACACCTTCTACGTCGGTGGCAAAGACGGGTGGGTTCTTAACCCATCTGAGAGTTACAGTAATTGGGCTCGCAGAAACAGGTTCCAAGTCAATGACGTTCTGGTGTTTAAGTATGCGAAAGGGTCGGATTCTGTGTTGGTGGTGAGTAAAGAGGATTATGACAAGTGTTATTTGAAGAATCCGATTATGAAATTAGATGATGGGAATTCTGAATTCAAGTTTGATCGGCCTGGGGCGTTTTATTTTGTTAGTGGCAACCATGGGAGCTGCCAAAATGGCCAGAAATTGCTTCTTGTTGTTATGGCTGTCCGGCCTCTTCCTCCGCCGTCTACGGTGGGTTCTCCGCCTCCTGGACCTAAGTCGCCCGTTTCGGCTCCGGTGCCGGGGGTTTCTCCCAGTCCGCCGTCTGGGACACCTTCCTCGCCCGCGCCTCATGGGGCTAAATCTCCGGTGACTGCACCTACGCCGCCATCTGGTTCTCCTGGAGCTAAATCGCCTTCTGGCTCTCCGCCGTCGGGAACTCCCAGTTCGCCGGCTCCTTCTGGGTCGCAAACTCCGGTAACTGCTCCGGGGCCGTCAGGTTCTCATTCCTCTGGTTCGCCGTATCCTGGAGCAAATTCTCCTTCTGGTTCCCCGCCGTCGGGAACACCCAGTTCGCCGTCTCCGTCGTCGGGAACACCCATTTTGCCATCTCCGCCGTCGGGCACACCCAGCTCGCCGTCTCCTGGGTCTCATGCTCCGGTGCCGTCAGGTTCTCAGTCTCCTGGTTCGCCATATCCCGGAGCTGAATCTCCTTCTGGTTCTACGCCGGTGGGGACACCGCCCACTTCACCTTCTCCATCATCGGGAACACCCACTTCGCCGTCTCCGTCTGGGTCTGAAACTCCAGTGACGACGCCATCTCCGGCTGGTTCTCCTTCATCAAATCCAGGAGCGAAATCTCCGTCAGTATCTCCGCCATTGGGGACACCCACGTCACCATCTCCGGCTGGTTCTCCTGTGACCATACCAACGCCGGCCGGTTCTCCCACTTCACCTTACCCCGGAGCTCACTCTCCGTCAGAGTCACACATTTCGCCGTCTCCTTCTGGTTCCGAAACTCCGGCGACCACACCAGTCCCCACTGGCTCTCCCACTTCACCATTCCCCGGAACAATCTCCCCGTCGGGATCACCCTCTTCGCCGCTCCCCGGTGGCGCCGCCTCCCCCGGAACATCTCCTGCCGGCTCCCCATCTTCCGGAACTAATTCCCCGACTACTTCGCCATCTCCCGCCGGCGCCATCACTCCCACAACAGCTCCGGTGCCGGCATTTTCACCGAGCACATCATCTCCGATTATCTCTCCCATCTTATCACCATCGACCGGATCACCAGTTGGCTCGCCAGGACCGTCGCTACTCCCACCGGAATCCGGTGCTCCGGTAAGTTCACCGCCGTCTCCACCATTATCGTCATCGTCTTCCCCAGGACCAGCACCGTCACCAACCGGTGCTGCAAATGACAGAACACGGTCAGGAACAGTGCCGTCGTCGGCCATAGCTTCAACTCCGTCAGTAATATTGTTGGGTTCCATCACAGTTCTGCTAAGCATGGTCATTAATGGCGGAGTTATTATTAACTTCACATAA | 1701 | 56.85 | MASLRSLSLSLCILFPCFFTLSQAYTFYVGGKDGWVLNPSESYSNWARRNRFQVNDVLVFKYAKGSDSVLVVSKEDYDKCYLKNPIMKLDDGNSEFKFDRPGAFYFVSGNHGSCQNGQKLLLVVMAVRPLPPPSTVGSPPPGPKSPVSAPVPGVSPSPPSGTPSSPAPHGAKSPVTAPTPPSGSPGAKSPSGSPPSGTPSSPAPSGSQTPVTAPGPSGSHSSGSPYPGANSPSGSPPSGTPSSPSPSSGTPILPSPPSGTPSSPSPGSHAPVPSGSQSPGSPYPGAESPSGSTPVGTPPTSPSPSSGTPTSPSPSGSETPVTTPSPAGSPSSNPGAKSPSVSPPLGTPTSPSPAGSPVTIPTPAGSPTSPYPGAHSPSESHISPSPSGSETPATTPVPTGSPTSPFPGTISPSGSPSSPLPGGAASPGTSPAGSPSSGTNSPTTSPSPAGAITPTTAPVPAFSPSTSSPIISPILSPSTGSPVGSPGPSLLPPESGAPVSSPPSPPLSSSSSPGPAPSPTGAANDRTRSGTVPSSAIASTPSVILLGSITVLLSMVINGGVIINFT | 566 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 108906991 | 108909270 | + | Tan0013979.1 | Tan01g4385 | 741809 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g4385 | 566 | PANTHER | BLUE COPPER PROTEIN | 19 | 168 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Tan01g4385 | 566 | FunFam | Early nodulin-like protein 1 | 24 | 129 | - | - | |
Tan01g4385 | 566 | CDD | OsENODL1_like | 25 | 125 | IPR041846 | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 514 | 535 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 406 | 485 | - | - | |
Tan01g4385 | 566 | ProSiteProfiles | Phytocyanin domain profile. | 25 | 126 | IPR003245 | GO:0009055(InterPro) | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 202 | 229 | - | - | |
Tan01g4385 | 566 | Pfam | Plastocyanin-like domain | 35 | 118 | IPR003245 | GO:0009055(InterPro) | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 344 | 370 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 295 | 309 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 310 | 343 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 133 | 535 | - | - | |
Tan01g4385 | 566 | SUPERFAMILY | Cupredoxins | 24 | 125 | IPR008972 | - | |
Tan01g4385 | 566 | Gene3D | - | 23 | 128 | IPR008972 | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 371 | 397 | - | - | |
Tan01g4385 | 566 | PRINTS | Proline rich extensin signature | 147 | 168 | - | - | |
Tan01g4385 | 566 | PRINTS | Proline rich extensin signature | 216 | 241 | - | - | |
Tan01g4385 | 566 | PRINTS | Proline rich extensin signature | 174 | 190 | - | - | |
Tan01g4385 | 566 | PRINTS | Proline rich extensin signature | 191 | 208 | - | - | |
Tan01g4385 | 566 | PRINTS | Proline rich extensin signature | 129 | 141 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 486 | 513 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 230 | 268 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 269 | 294 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 133 | 165 | - | - | |
Tan01g4385 | 566 | MobiDBLite | consensus disorder prediction | 173 | 188 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4385 | Tan-Chr1:108906991 | Tan05g0755 | Tan-Chr5:5477121 | 1.40E-37 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g4385 | - | - | - | 0.0 |