Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4409 ATGGCTGAAAATGCACCCCCAGAGGGGCGATCTCTGGCTTTGACGCCTACTTGGTCTGTTGCTTCTGTGTTGACAATTTTCGTCGCTGTTTCATTGCTTGTAGAGCGCTCCATTCATAGGCTAAGCTCTTGGCTGGGAAAAACTCATAGAAAACCCTTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTAATGCTGCTTGGATTTATTTCTTTGCTTCTGACAGCAACATCAAGTGTGATATCAAACATCTGCATTCCATCCAAGTTTTATAATACCTCTTTTACTCCATGCGCCCAATCAGAGATTGATGAACAAAATGAGGATAATTCTTCATCTGAGAAGCGAAAGCTATATATGGTTTCTGTTTTCCCACATTTGTATAGGAGGATGCTAACTGTGAACAAAAATACTTGCAAAGAGGGTCATGAGCCATTTGTTTCATATGAAGGCCTCGAGCAATTGCATCGCTTTATCTTTGTAATGGCAGTAACTCATATATCTTACAGTTGCTTGACAATGTTGCTGGCAATTGTGAAGATCCACAGTTGGAGAGTATGGGAAAACGAAGCTCACATGGACCACCATGATTTATTCAGTGATACAACGAGAGAAAAGATAATGCAGAGACAATCTACCTTTGTACAATACCACACCTCCAATCCTTTAAATAGGAATAGTGTTCTTATTTGGATGACATGTTTCTTTCGGCAATTTGGGCGTTCTGTTGTTCGTTCTGACTACCTTACACTTCGCAAGGGCTTCATCATGAATCACAACCTCTCATCAAGATATGATTTCCATAGCTACATGGTTCGTTCAATGGAAGAAGAATTCCAAAGGATCGTTGGTGTGAGCGGTCCACTGTGGGGATTTGTCGTTGCATTTCTGCTGTTTAATGTGAAAGGGTCTAATCTATATTTTTGGATAGCAACTATTCCTGTTACTCTTGTTCTTTTAGTAGGCACAAAGTTACAGCATGTTATTGCAACTTTGACATTGGAGAATGCTGGTATAACTGGATTCTTTTCCGGAGCGAAGCTGAGACCTCGTGATGATCTTTTCTGGTTTAAGAAGCCTGAACTCCTGTTGTCCTTGATCCATTTTGTTCTTTTCCAGAATGCTTTTGAATTGGCCTCGTTCTTCTGGTTCTGGTGGCAATTTGGATACAGTTCTTGCTTCATTAGTAATCATCTGCTTGTCTATGTAAGGCTGATCTTGGGGTTTGCCGGACAATTTCTTTGCAGCTATAGCACCTTGCCCCTATATGCACTGGTTACTCAGATGGGAACAAACTACAAGGCTGCCTTAATTCCACAAAGGATAAGAGAAACAATCCATGGGTGGGGTAAGTCGGCTAGAAGGAAGAGAAGGCTCCGAATATTTACTGATGATGCTACAATCAACACAGAAACAAGCACCGTGATGTCACTTGAGGACGACGACAATCGGCATATTGATACACCCAAAATTGCCACTGGCTATGCCGAAATCGAGTTGCAGCGACCTACTGCAGCAAATGTGTCTATCACTGTCGCAAATGATACATCACGTGGGGTTGGAACTGCCCTTCTTCAACCCTCTCTATCCCTTTCCTCACCTGTCCCTCAAAACTTTGATGTCGAAAACCCTTTAAGAAGCTCATCTATGCCGGTACAAAGATAA 1665 41.92 MAENAPPEGRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSSWLGKTHRKPLFEAVEKMKEELMLLGFISLLLTATSSVISNICIPSKFYNTSFTPCAQSEIDEQNEDNSSSEKRKLYMVSVFPHLYRRMLTVNKNTCKEGHEPFVSYEGLEQLHRFIFVMAVTHISYSCLTMLLAIVKIHSWRVWENEAHMDHHDLFSDTTREKIMQRQSTFVQYHTSNPLNRNSVLIWMTCFFRQFGRSVVRSDYLTLRKGFIMNHNLSSRYDFHSYMVRSMEEEFQRIVGVSGPLWGFVVAFLLFNVKGSNLYFWIATIPVTLVLLVGTKLQHVIATLTLENAGITGFFSGAKLRPRDDLFWFKKPELLLSLIHFVLFQNAFELASFFWFWWQFGYSSCFISNHLLVYVRLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKSARRKRRLRIFTDDATINTETSTVMSLEDDDNRHIDTPKIATGYAEIELQRPTAANVSITVANDTSRGVGTALLQPSLSLSSPVPQNFDVENPLRSSSMPVQR 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 109238628 109245814 - Tan0022293.1 Tan01g4409 741833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4409 554 PANTHER MLO-LIKE PROTEIN 1 1 468 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Tan01g4409 554 Pfam Mlo family 9 466 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Tan01g4409 554 MobiDBLite consensus disorder prediction 535 554 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2309 Tan-Chr1:27876705 Tan01g4409 Tan-Chr1:109238628 9.60E-108 dispersed
Tan01g2310 Tan-Chr1:27876705 Tan01g4409 Tan-Chr1:109238628 1.20E-88 dispersed
Tan01g4409 Tan-Chr1:109238628 Tan11g0588 Tan-Chr11:5240356 2.10E-254 dispersed
Tan01g4409 Tan-Chr1:109238628 Tan05g0268 Tan-Chr5:2011037 4.20E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4409 K08472 - csv:101207170 1025.0