Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4444 ATGAAGTTTGTTTCCATGCCTCTGGTTCTATCTGTCGTTTTGTTCATGTGTATTGGATCTTACGCCTCTTTCACTCCCATTGATAACTATTTGATAGCGTGTGGTTCTTCACAAAACATCACCTTCCAAGGTAGAACTTTCGTTCCTGATTCTGGAAATCCATTGCTCTCCCATGATGGTGGAAGCTTTGTTGTTGTTAGTTCAAAAGGTACTCTTGCTCCATCTCCAATCTATCAATCTGCTCGGGTTTTCACGAGCATTGCTTCGTATAAGTTTGAAATCAAGCAAGAGGGTCGGCATTGGGTTCGGCTGTATTTTTATCCTATTCCGAAGTCGGAGCAGAATCTGGCATCTGCGTCGATAACTGTTGTTACTGATAAGTTTGTGTTGTTAAACAACTTCACTTTCAAGAACTACAATGGTACTTTTATGTTCAAGGAGTATGCAATCAATGTCACTTCGGATTCCTTGACCCTTACTTTCATCCCATCTAATGGTTCAGTTTCATTCGTTAATGCGATTGAAGTTGTCTCGGTGCCTGATGAGCTGCTCCCTGACCAAGCATTGGCTTTGAATCCATCTGCTCCTTTTAGCGGTATCTCGGCACTTGCTCTTGAAACTGTTTACCGGCTGAACATGGGGGGTCCTTTACTCACTTCGCAAAATGATACACTCGGAAGAACTTGGGAGAATGATATGAAATACCTCCATGTCAACAGTTCTGCAGTGAATGTCTCTGCCAGCCCGGGGAGCATAAAATATCATGCTGGTGTTACACCAGAAACTGCACCAAATTGGGTTTATGCTACTGCCGATGCCATGGGAGACCCGAATGTACCGAACGTGAACTTCAACTTGACTTGGGTTTTCTCTGTTGAGCCAAATTTTCAATACTTTGTCCGAGTGCATTTTTGTGATATAATGAGCAAGGCTCTCAACAATCTGGTATTCAATCTTTACATCAATTCTGATAATGCTTTGGGAAGCTTTGATCTGTCGTCGTTAACCGGTGACTTGGGCGTGCCTTATTACAAAGACTTCATTTCCAACTCCGCAGATTCAGCTACTTTGACTGTTAGTGTCGGTCCAGATACAATAGCAGACATCACCAATGCAACCATGAATGGCTTGGAGATTATGAAGATAAGCAATCAAGCCGGTAGCTTGGATGGAACTTTGTCCATTGAAAGTCTTTTCCCAAATGCGCCCTCGAAGAAGAACAATGTAGTAATCATTGTTGGTTCTGTCTTGGGAGCTGTTGTAGGCCTTGCTTTGCTTGTCTTGTGTTATTGCTGCTTCATAGGTCGCAAGTCAAAGACTACTCAGCCAGCACACCCATGGCTGCCATTGCCCTTGTATGGAAACTCTCAAACCATGACAAAAGGATCAACAATTTCTCAAAAGAGTGGAACTGCAAGCTGCATTTCTTTGGCTTCCTCCAGCCTTGGAAGATTCTTCACATTTCAGGAAATCCTTGATGCTACCAAAAAATTTGATGAAAACCTGCTCCTTGGAGTTGGTGGTTTTGGTAGGGTTTACAAGGGAACACTTGAAGATGGTCTGAAAGTTGCTGTTAAAAGGGGTAACCCCAGATCTGAACAAGGTCTTGCCGAGTTTCGAACTGAAATAGAAATGTTATCAAAGCTCCGGCATCGTCACCTGGTGTCTCTTATTGGCTACTGTGATGAAAGATCAGAAATGATTCTTGTCTATGAATATATGGCAAATGGACCTCTCAGGAGTCATTTGTATGGAGCAGATCTACCACCATTGTCGTGGAAGCAACGGCTTGATATTTGCATCGGTGCTGCGAGAGGGCTTCATTATCTTCACACTGGTGCAGCTCAAAGCATTATACACCGAGATGTTAAAACCACAAATATTCTCTTGGACGAGAATTTTGTTGCCAAAGTTGCAGACTTTGGTCTCTCAAAAACTGGGCCATCTCTGGATCAGACTCATGTAAGTACTGCTGTCAAGGGTAGTTTTGGTTACCTCGATCCTGAATACTTCAGACGACAACAGCTCACTGAGAAGTCAGATGTATATTCATTCGGGGTTGTGCTAATGGAAGTTCTCTGCACGAGGCCGGCACTAAACCCTGTTCTGCCCCGAGAACAAGTTAATATAGCAGAATGGGCAATGACCTGGCAGAAGAAGGGCATGCTAGATCATATCATGGACCCGAATCTGGTCGGTAAAGTTAATCCAGCATCGCTTAAGAAGTTTGGTGAAACAGCTGAGAAGTGCCTGGCCGAGTATGGGGTTGACAGGCCGTCTATGGGAGATGTTCTATGGAACCTGGAATATGCTCTTCAGCTTGAGGAAACTTCGTCTGCTCTAATGGAACCTGAAGACAACAGCACGAACCACATCCCTACCATCCAACTGACCCCACTTGAGCCATTTGATAACAGTGTAAGCATGATTGATGGAGGGAATTCTGGCACTGATGATGATGCCGAAGATGCTGCAACAAGTGCAGTGTTTTCGCAGCTCGTAAATCCTCGCGGAAGATGA 2520 44.09 MKFVSMPLVLSVVLFMCIGSYASFTPIDNYLIACGSSQNITFQGRTFVPDSGNPLLSHDGGSFVVVSSKGTLAPSPIYQSARVFTSIASYKFEIKQEGRHWVRLYFYPIPKSEQNLASASITVVTDKFVLLNNFTFKNYNGTFMFKEYAINVTSDSLTLTFIPSNGSVSFVNAIEVVSVPDELLPDQALALNPSAPFSGISALALETVYRLNMGGPLLTSQNDTLGRTWENDMKYLHVNSSAVNVSASPGSIKYHAGVTPETAPNWVYATADAMGDPNVPNVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNNLVFNLYINSDNALGSFDLSSLTGDLGVPYYKDFISNSADSATLTVSVGPDTIADITNATMNGLEIMKISNQAGSLDGTLSIESLFPNAPSKKNNVVIIVGSVLGAVVGLALLVLCYCCFIGRKSKTTQPAHPWLPLPLYGNSQTMTKGSTISQKSGTASCISLASSSLGRFFTFQEILDATKKFDENLLLGVGGFGRVYKGTLEDGLKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDHIMDPNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDGGNSGTDDDAEDAATSAVFSQLVNPRGR 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 109800869 109803388 + Tan0003523.1 Tan01g4444 741868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4444 839 Pfam Malectin-like domain 32 382 IPR024788 -
Tan01g4444 839 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4444 839 Pfam Protein tyrosine and serine/threonine kinase 504 695 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4444 839 PANTHER OS07G0166700 PROTEIN 486 775 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Tan01g4444 839 SMART serkin_6 498 771 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4444 839 CDD STKc_IRAK 504 769 - -
Tan01g4444 839 FunFam Putative receptor-like protein kinase 29 180 - -
Tan01g4444 839 FunFam Receptor-like protein kinase FERONIA 574 790 - -
Tan01g4444 839 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524(InterPro)
Tan01g4444 839 Gene3D Transferase(Phosphotransferase) domain 1 574 791 - -
Tan01g4444 839 Gene3D Phosphorylase Kinase; domain 1 458 573 - -
Tan01g4444 839 MobiDBLite consensus disorder prediction 803 824 - -
Tan01g4444 839 FunFam receptor-like protein kinase FERONIA 460 573 - -
Tan01g4444 839 FunFam Receptor-like protein kinase FERONIA 204 384 - -
Tan01g4444 839 Gene3D - 203 384 - -
Tan01g4444 839 Gene3D - 29 179 - -
Tan01g4444 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4444 839 SUPERFAMILY Protein kinase-like (PK-like) 476 769 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4444 Tan-Chr1:109800869 Tan09g2091 Tan-Chr9:71283374 2.20E-244 dispersed
Tan11g1221 Tan-Chr11:10249675 Tan01g4444 Tan-Chr1:109800869 5.50E-61 dispersed
Tan01g4444 Tan-Chr1:109800869 Tan06g0330 Tan-Chr6:2602063 8.00E-226 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67140 PF12819 Malectin_like 6.10E-37 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4444 - - - 0.0