Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4458 ATGATGTTATCTGCATCGCCTTCGACGATAGCTCGGAGTTCACTCGAGGAAATGCTTGATTCCCTTCGACGGAGGGATGAGATTGATAAGCCTAAAGACATGCCGCCTGCATTGCCGTCTCGGCCCACTTCAAAGGCTCGTATTCCTCCGGTGGGACGGGCTTTACCGGTCAATTTCAGGGTTAATGATGATGGTTCCTCAGAGTGCTCTATTAATGGCTTTAATGGAAGGGAAGATGCAATGAGGAAGGAGAATGGTATGGGTAATTTTGCATTCAAAAGAATGAACAGAGATCAAAACGAGGAATCGCCTTACATGGTAGCTTCAGAAAATGATGATAGAGATCAAGTGAATGGCTCGAATGGTGCTTTAATGTCAAATATTCAGGGGTCTCACTGGGAGGATAATATCAGTTATTTTCTTCAGAAGAAACTCCGTGTTTGGTGTCAACTTCCAAATGGACAATGGGATTTAGGAACTATACAGTCAAACACTGGGGCGGAGGCATCTGTCATGCTCTCAAACAAAAAGGTCATTAAAATTTCGACCGTAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGTACAGCTTAGTTATTTGAACGAGCCTTCGGTTATTCACAATCTCCAACGAAGATTTTCCCGGGATAAGATTTATAGTAATGCAGGGTCAGTTTTGATTGCAGTCAATCCCCTGAAAGACACTAAACAGTATGGAAATGAATTTATTACAGCCTATAGACAGAGAGTCATAAACAGCCCTCATGTTTATGCTACAGCAGATGCTGCCTATTCTGGGATGATAAAAGATGAAGTTAATCAATCCATTATCATCAGTGGTGAAAGTGGAGCCGGAAAAACTGAGACAGCAAAAGTTGCCCTTCAATACCTGACTGCCCTTGGTGGTGGCAGTGGCATAGATGATAGAATCCCTCAGGCGAATGTTATATTCGAAGCATTTGGGAATGCTAAAACCTCCAGAAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTGTAATCCAGACTTTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGGTCAATGGTGAAAGATCATTCCATGTCTTCTATCAACTTTGTGCTGGAGCACCATCTACACTTAAAGAGAAATTGAATATCAGAGCGGCGAGTGAGTACAGTTACCTTAATCACAGCGAATGCCTGGTGATTGGTGGTGTGGATGATGCACGGAAATTTCATATTCTTGTGGAAGCCCTAGATATACTTAAATTCACAAAGGAAGATCAAGAGCTTGCATTTGGCTTGCTTGCTGCTGTTTTGTGGATAGGGAACATTACGTTTCAAACAATTGATAGTGAAAATCATGTGGAGGTCATGGCTAATGAAGCGGTTACGAATGCTGCCAAGCTGATGGGCTGCAGTTCTAATGAGCTTAAGTTAGTTTTATCAATCCACAAAGAGCAATCTGGCAAGGATAGCATTGCTAAAAAATTGACATTACGACAGGCAACCGATGCAAGAGATGCATTGGCAAAATTTATTTATGCAAGCTTGTTTGACTGGCTTGTAGAACGAATCAATAAGTCACTTAAACCAGGAAGGGAGCATTCTGGAAGATCCATAAATATCCTTGACTTCTATGGGTTTGAGTCATTTAAGAAAAATGGCTTCGAACAATTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATGCGGCATCTATTCAAACTTCAGCAGGAGGACTACGAATTTAACGGGGTTGATGGCACAAAAGTCAACTTTGAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAAACCCCTAGGAGTACTAGCTTTGTTAGACGAAGAGTTCAATTTTCCCAAGGCTACAGATCTGACGTTTGCTAATAAACTTAAGCAACACTTTAAATCTCATCCTCGCTTTAAAGGGGAAAGAGGTAGGGCTTTTGGTGTTCGCCATTATGCTGGAGAGGTTGTATATGATACAAATGGGTTTTTGGAGAAGAATAGAGATCTGTTGCACTCAGATTCTATCCAACTATTTTCATCATGTACTTGCAAGCTACTGCAATTATTTGCCTCTAAACTGATTAACCATTCCCACAAACCAACAGTTTCAACGTACACTACAGAAGTAGTAGAATCCCCTGAGCCAGGTGTTGGTACCAAGTACAAGGTTCTACTATTTAACCTATTTCATAAATTGGAGCGCACCAGTCATCACTTCATTTGTTGCATGAGACCGAACAGAAATCAAATTTGTGGCTTATTTGAGGAGGATCTGGTATTACAACAGCTTAGGTACTATGGAATTTTGGAGGTGGTTAGGATTTCAAGATCTGGATATCCTACCAGAATGACGCATCATGAATTTGCTGGAAGGTATCGATACTTCCTTAAAGAAACTGGTGTATTTCAAGATCCATTGAGTATATCAATTGCTGTTCTGCAACAATTTAATGTCCACCCTGAGATGTACCGTGTTGGTTATACCAAACTATTTTTCCGAACTGGGCAGATTAGGGCATTGGAGGAAATGAGAATGCAGGCTGTGCAAGGCATCCTAGGGATTCAAAAGTACTTCCGTGGTTGCCATTCCCGTGGCCGCTTCCATGAACTTAAGCAAGCAGCCACTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGAAGAAGATGTACCGGTAAGGTGAAAAGGTTCTCATTCGTTGTGTACGCTTTCAATGTTCCTAAAAAGGTTTATGAACAGAAGGCAATCATACGATTACAATCTGTAATACGTGGTTCATTGGCTCGAAAGCATCTTAAGGGCATAGGTGATTCGAAGAGTTCTTTTCCTGAAAACAGAAAGCTTAAACCGAACACGGGCAGGAGACTTTCAGAGGATAAATTTTATGAACGGGGTCAAGCCCTGCCTACAACTCTGACTGACCTTCAAAAGAGGGTCCTCGAGGCAGAAGCAACCATAGAGAAGAAGGCAGAGGAAAATGCTGCACTGCGGGACCAAGTAAAGCAATTCGAGGCTAGGCGGTTAGAATATGAAGCCAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAGAAGACTCTTGCTACTGAAAATGTAGCCTGTCCACCTGGAAGAGTTGATGCTGGTAACTCACCTCCTCACTATTACGATTCTGAGGATACGACGTCCTTGGGATCTCGAACTCCTGGTGGTACCACACCTATGAAAGTTTCTGGAATTTCTGAAGTTGGAGCAGGCCGAGAAATGAATGGTACTTTAGTTGCAGTGAACAATCTTGTAAAGGAATTTGAACAGCGACGAAATGCATTTGATGATGATGCCAAAGCTTTAATTGAAGCAAAATCAGGTCAGGCACAGACAGGGGCTAACATTAATCCAGATGAAGAATACCGTAAAATTAAAGTCCGGTTTGAAGCATGGAAAAAGGAGTACAAGGCAAGATTACGGGAAACTAAACCTAAGGTTCATAAACATGGACATTTTGAAGTTGATAAAATTCGTCGAAAATGGTGGGGGAAGTTGAGCTCAAGAGCAACATCATAA 3642 41.57 MMLSASPSTIARSSLEEMLDSLRRRDEIDKPKDMPPALPSRPTSKARIPPVGRALPVNFRVNDDGSSECSINGFNGREDAMRKENGMGNFAFKRMNRDQNEESPYMVASENDDRDQVNGSNGALMSNIQGSHWEDNISYFLQKKLRVWCQLPNGQWDLGTIQSNTGAEASVMLSNKKVIKISTVDLLPANPDIVEGVDDLVQLSYLNEPSVIHNLQRRFSRDKIYSNAGSVLIAVNPLKDTKQYGNEFITAYRQRVINSPHVYATADAAYSGMIKDEVNQSIIISGESGAGKTETAKVALQYLTALGGGSGIDDRIPQANVIFEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGAVIQTFLLEKSRVVQLVNGERSFHVFYQLCAGAPSTLKEKLNIRAASEYSYLNHSECLVIGGVDDARKFHILVEALDILKFTKEDQELAFGLLAAVLWIGNITFQTIDSENHVEVMANEAVTNAAKLMGCSSNELKLVLSIHKEQSGKDSIAKKLTLRQATDARDALAKFIYASLFDWLVERINKSLKPGREHSGRSINILDFYGFESFKKNGFEQFCINYANERLQQHFMRHLFKLQQEDYEFNGVDGTKVNFEDNQECLNLIEKKPLGVLALLDEEFNFPKATDLTFANKLKQHFKSHPRFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTCKLLQLFASKLINHSHKPTVSTYTTEVVESPEPGVGTKYKVLLFNLFHKLERTSHHFICCMRPNRNQICGLFEEDLVLQQLRYYGILEVVRISRSGYPTRMTHHEFAGRYRYFLKETGVFQDPLSISIAVLQQFNVHPEMYRVGYTKLFFRTGQIRALEEMRMQAVQGILGIQKYFRGCHSRGRFHELKQAATTLQSFIRGENARRRCTGKVKRFSFVVYAFNVPKKVYEQKAIIRLQSVIRGSLARKHLKGIGDSKSSFPENRKLKPNTGRRLSEDKFYERGQALPTTLTDLQKRVLEAEATIEKKAEENAALRDQVKQFEARRLEYEAKMKSMEDMWQKQMASLQMSLAAAKKTLATENVACPPGRVDAGNSPPHYYDSEDTTSLGSRTPGGTTPMKVSGISEVGAGREMNGTLVAVNNLVKEFEQRRNAFDDDAKALIEAKSGQAQTGANINPDEEYRKIKVRFEAWKKEYKARLRETKPKVHKHGHFEVDKIRRKWWGKLSSRATS 1213
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 109916224 109927041 + Tan0020432.1 Tan01g4458 741882
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4458 1213 SMART iq_5 867 889 IPR000048 GO:0005515(InterPro)
Tan01g4458 1213 SMART iq_5 932 954 IPR000048 GO:0005515(InterPro)
Tan01g4458 1213 SMART iq_5 890 912 IPR000048 GO:0005515(InterPro)
Tan01g4458 1213 Gene3D - 565 756 - -
Tan01g4458 1213 CDD MYSc_Myo8 209 854 IPR036022 -
Tan01g4458 1213 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 142 191 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 PANTHER MYOSIN 146 1203 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Tan01g4458 1213 SMART MYSc_2a 189 867 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 ProSiteProfiles IQ motif profile. 933 962 - -
Tan01g4458 1213 Pfam Myosin head (motor domain) 197 854 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 Pfam IQ calmodulin-binding motif 893 911 IPR000048 GO:0005515(InterPro)
Tan01g4458 1213 Pfam IQ calmodulin-binding motif 935 954 IPR000048 GO:0005515(InterPro)
Tan01g4458 1213 Gene3D Kinesin motor domain 194 799 IPR036961 -
Tan01g4458 1213 Gene3D Myosin VI head, motor domain, U50 subdomain 434 542 - -
Tan01g4458 1213 MobiDBLite consensus disorder prediction 1 51 - -
Tan01g4458 1213 Gene3D - 377 433 - -
Tan01g4458 1213 MobiDBLite consensus disorder prediction 1 15 - -
Tan01g4458 1213 ProSiteProfiles Myosin motor domain profile. 195 866 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 Gene3D - 872 918 - -
Tan01g4458 1213 Gene3D - 800 867 - -
Tan01g4458 1213 PRINTS Myosin heavy chain signature 225 244 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 PRINTS Myosin heavy chain signature 553 581 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 PRINTS Myosin heavy chain signature 606 634 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 PRINTS Myosin heavy chain signature 321 348 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 PRINTS Myosin heavy chain signature 279 304 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan01g4458 1213 ProSiteProfiles IQ motif profile. 891 919 - -
Tan01g4458 1213 MobiDBLite consensus disorder prediction 955 976 - -
Tan01g4458 1213 Coils Coil 993 1041 - -
Tan01g4458 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 912 IPR027417 -
Tan01g4458 1213 MobiDBLite consensus disorder prediction 17 34 - -
Tan01g4458 1213 FunFam Myosin heavy chain 377 433 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4458 Tan-Chr1:109916224 Tan04g0424 Tan-Chr4:3559476 0.00E+00 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4458 K10357 - csv:101210624 2061.96