Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g4458 | ATGATGTTATCTGCATCGCCTTCGACGATAGCTCGGAGTTCACTCGAGGAAATGCTTGATTCCCTTCGACGGAGGGATGAGATTGATAAGCCTAAAGACATGCCGCCTGCATTGCCGTCTCGGCCCACTTCAAAGGCTCGTATTCCTCCGGTGGGACGGGCTTTACCGGTCAATTTCAGGGTTAATGATGATGGTTCCTCAGAGTGCTCTATTAATGGCTTTAATGGAAGGGAAGATGCAATGAGGAAGGAGAATGGTATGGGTAATTTTGCATTCAAAAGAATGAACAGAGATCAAAACGAGGAATCGCCTTACATGGTAGCTTCAGAAAATGATGATAGAGATCAAGTGAATGGCTCGAATGGTGCTTTAATGTCAAATATTCAGGGGTCTCACTGGGAGGATAATATCAGTTATTTTCTTCAGAAGAAACTCCGTGTTTGGTGTCAACTTCCAAATGGACAATGGGATTTAGGAACTATACAGTCAAACACTGGGGCGGAGGCATCTGTCATGCTCTCAAACAAAAAGGTCATTAAAATTTCGACCGTAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGTACAGCTTAGTTATTTGAACGAGCCTTCGGTTATTCACAATCTCCAACGAAGATTTTCCCGGGATAAGATTTATAGTAATGCAGGGTCAGTTTTGATTGCAGTCAATCCCCTGAAAGACACTAAACAGTATGGAAATGAATTTATTACAGCCTATAGACAGAGAGTCATAAACAGCCCTCATGTTTATGCTACAGCAGATGCTGCCTATTCTGGGATGATAAAAGATGAAGTTAATCAATCCATTATCATCAGTGGTGAAAGTGGAGCCGGAAAAACTGAGACAGCAAAAGTTGCCCTTCAATACCTGACTGCCCTTGGTGGTGGCAGTGGCATAGATGATAGAATCCCTCAGGCGAATGTTATATTCGAAGCATTTGGGAATGCTAAAACCTCCAGAAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTGTAATCCAGACTTTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGGTCAATGGTGAAAGATCATTCCATGTCTTCTATCAACTTTGTGCTGGAGCACCATCTACACTTAAAGAGAAATTGAATATCAGAGCGGCGAGTGAGTACAGTTACCTTAATCACAGCGAATGCCTGGTGATTGGTGGTGTGGATGATGCACGGAAATTTCATATTCTTGTGGAAGCCCTAGATATACTTAAATTCACAAAGGAAGATCAAGAGCTTGCATTTGGCTTGCTTGCTGCTGTTTTGTGGATAGGGAACATTACGTTTCAAACAATTGATAGTGAAAATCATGTGGAGGTCATGGCTAATGAAGCGGTTACGAATGCTGCCAAGCTGATGGGCTGCAGTTCTAATGAGCTTAAGTTAGTTTTATCAATCCACAAAGAGCAATCTGGCAAGGATAGCATTGCTAAAAAATTGACATTACGACAGGCAACCGATGCAAGAGATGCATTGGCAAAATTTATTTATGCAAGCTTGTTTGACTGGCTTGTAGAACGAATCAATAAGTCACTTAAACCAGGAAGGGAGCATTCTGGAAGATCCATAAATATCCTTGACTTCTATGGGTTTGAGTCATTTAAGAAAAATGGCTTCGAACAATTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATGCGGCATCTATTCAAACTTCAGCAGGAGGACTACGAATTTAACGGGGTTGATGGCACAAAAGTCAACTTTGAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAAACCCCTAGGAGTACTAGCTTTGTTAGACGAAGAGTTCAATTTTCCCAAGGCTACAGATCTGACGTTTGCTAATAAACTTAAGCAACACTTTAAATCTCATCCTCGCTTTAAAGGGGAAAGAGGTAGGGCTTTTGGTGTTCGCCATTATGCTGGAGAGGTTGTATATGATACAAATGGGTTTTTGGAGAAGAATAGAGATCTGTTGCACTCAGATTCTATCCAACTATTTTCATCATGTACTTGCAAGCTACTGCAATTATTTGCCTCTAAACTGATTAACCATTCCCACAAACCAACAGTTTCAACGTACACTACAGAAGTAGTAGAATCCCCTGAGCCAGGTGTTGGTACCAAGTACAAGGTTCTACTATTTAACCTATTTCATAAATTGGAGCGCACCAGTCATCACTTCATTTGTTGCATGAGACCGAACAGAAATCAAATTTGTGGCTTATTTGAGGAGGATCTGGTATTACAACAGCTTAGGTACTATGGAATTTTGGAGGTGGTTAGGATTTCAAGATCTGGATATCCTACCAGAATGACGCATCATGAATTTGCTGGAAGGTATCGATACTTCCTTAAAGAAACTGGTGTATTTCAAGATCCATTGAGTATATCAATTGCTGTTCTGCAACAATTTAATGTCCACCCTGAGATGTACCGTGTTGGTTATACCAAACTATTTTTCCGAACTGGGCAGATTAGGGCATTGGAGGAAATGAGAATGCAGGCTGTGCAAGGCATCCTAGGGATTCAAAAGTACTTCCGTGGTTGCCATTCCCGTGGCCGCTTCCATGAACTTAAGCAAGCAGCCACTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGAAGAAGATGTACCGGTAAGGTGAAAAGGTTCTCATTCGTTGTGTACGCTTTCAATGTTCCTAAAAAGGTTTATGAACAGAAGGCAATCATACGATTACAATCTGTAATACGTGGTTCATTGGCTCGAAAGCATCTTAAGGGCATAGGTGATTCGAAGAGTTCTTTTCCTGAAAACAGAAAGCTTAAACCGAACACGGGCAGGAGACTTTCAGAGGATAAATTTTATGAACGGGGTCAAGCCCTGCCTACAACTCTGACTGACCTTCAAAAGAGGGTCCTCGAGGCAGAAGCAACCATAGAGAAGAAGGCAGAGGAAAATGCTGCACTGCGGGACCAAGTAAAGCAATTCGAGGCTAGGCGGTTAGAATATGAAGCCAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAGAAGACTCTTGCTACTGAAAATGTAGCCTGTCCACCTGGAAGAGTTGATGCTGGTAACTCACCTCCTCACTATTACGATTCTGAGGATACGACGTCCTTGGGATCTCGAACTCCTGGTGGTACCACACCTATGAAAGTTTCTGGAATTTCTGAAGTTGGAGCAGGCCGAGAAATGAATGGTACTTTAGTTGCAGTGAACAATCTTGTAAAGGAATTTGAACAGCGACGAAATGCATTTGATGATGATGCCAAAGCTTTAATTGAAGCAAAATCAGGTCAGGCACAGACAGGGGCTAACATTAATCCAGATGAAGAATACCGTAAAATTAAAGTCCGGTTTGAAGCATGGAAAAAGGAGTACAAGGCAAGATTACGGGAAACTAAACCTAAGGTTCATAAACATGGACATTTTGAAGTTGATAAAATTCGTCGAAAATGGTGGGGGAAGTTGAGCTCAAGAGCAACATCATAA | 3642 | 41.57 | MMLSASPSTIARSSLEEMLDSLRRRDEIDKPKDMPPALPSRPTSKARIPPVGRALPVNFRVNDDGSSECSINGFNGREDAMRKENGMGNFAFKRMNRDQNEESPYMVASENDDRDQVNGSNGALMSNIQGSHWEDNISYFLQKKLRVWCQLPNGQWDLGTIQSNTGAEASVMLSNKKVIKISTVDLLPANPDIVEGVDDLVQLSYLNEPSVIHNLQRRFSRDKIYSNAGSVLIAVNPLKDTKQYGNEFITAYRQRVINSPHVYATADAAYSGMIKDEVNQSIIISGESGAGKTETAKVALQYLTALGGGSGIDDRIPQANVIFEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGAVIQTFLLEKSRVVQLVNGERSFHVFYQLCAGAPSTLKEKLNIRAASEYSYLNHSECLVIGGVDDARKFHILVEALDILKFTKEDQELAFGLLAAVLWIGNITFQTIDSENHVEVMANEAVTNAAKLMGCSSNELKLVLSIHKEQSGKDSIAKKLTLRQATDARDALAKFIYASLFDWLVERINKSLKPGREHSGRSINILDFYGFESFKKNGFEQFCINYANERLQQHFMRHLFKLQQEDYEFNGVDGTKVNFEDNQECLNLIEKKPLGVLALLDEEFNFPKATDLTFANKLKQHFKSHPRFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTCKLLQLFASKLINHSHKPTVSTYTTEVVESPEPGVGTKYKVLLFNLFHKLERTSHHFICCMRPNRNQICGLFEEDLVLQQLRYYGILEVVRISRSGYPTRMTHHEFAGRYRYFLKETGVFQDPLSISIAVLQQFNVHPEMYRVGYTKLFFRTGQIRALEEMRMQAVQGILGIQKYFRGCHSRGRFHELKQAATTLQSFIRGENARRRCTGKVKRFSFVVYAFNVPKKVYEQKAIIRLQSVIRGSLARKHLKGIGDSKSSFPENRKLKPNTGRRLSEDKFYERGQALPTTLTDLQKRVLEAEATIEKKAEENAALRDQVKQFEARRLEYEAKMKSMEDMWQKQMASLQMSLAAAKKTLATENVACPPGRVDAGNSPPHYYDSEDTTSLGSRTPGGTTPMKVSGISEVGAGREMNGTLVAVNNLVKEFEQRRNAFDDDAKALIEAKSGQAQTGANINPDEEYRKIKVRFEAWKKEYKARLRETKPKVHKHGHFEVDKIRRKWWGKLSSRATS | 1213 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 109916224 | 109927041 | + | Tan0020432.1 | Tan01g4458 | 741882 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g4458 | 1213 | SMART | iq_5 | 867 | 889 | IPR000048 | GO:0005515(InterPro) | |
| Tan01g4458 | 1213 | SMART | iq_5 | 932 | 954 | IPR000048 | GO:0005515(InterPro) | |
| Tan01g4458 | 1213 | SMART | iq_5 | 890 | 912 | IPR000048 | GO:0005515(InterPro) | |
| Tan01g4458 | 1213 | Gene3D | - | 565 | 756 | - | - | |
| Tan01g4458 | 1213 | CDD | MYSc_Myo8 | 209 | 854 | IPR036022 | - | |
| Tan01g4458 | 1213 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 142 | 191 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | PANTHER | MYOSIN | 146 | 1203 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Tan01g4458 | 1213 | SMART | MYSc_2a | 189 | 867 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | ProSiteProfiles | IQ motif profile. | 933 | 962 | - | - | |
| Tan01g4458 | 1213 | Pfam | Myosin head (motor domain) | 197 | 854 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | Pfam | IQ calmodulin-binding motif | 893 | 911 | IPR000048 | GO:0005515(InterPro) | |
| Tan01g4458 | 1213 | Pfam | IQ calmodulin-binding motif | 935 | 954 | IPR000048 | GO:0005515(InterPro) | |
| Tan01g4458 | 1213 | Gene3D | Kinesin motor domain | 194 | 799 | IPR036961 | - | |
| Tan01g4458 | 1213 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 434 | 542 | - | - | |
| Tan01g4458 | 1213 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
| Tan01g4458 | 1213 | Gene3D | - | 377 | 433 | - | - | |
| Tan01g4458 | 1213 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Tan01g4458 | 1213 | ProSiteProfiles | Myosin motor domain profile. | 195 | 866 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | Gene3D | - | 872 | 918 | - | - | |
| Tan01g4458 | 1213 | Gene3D | - | 800 | 867 | - | - | |
| Tan01g4458 | 1213 | PRINTS | Myosin heavy chain signature | 225 | 244 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | PRINTS | Myosin heavy chain signature | 553 | 581 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | PRINTS | Myosin heavy chain signature | 606 | 634 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | PRINTS | Myosin heavy chain signature | 321 | 348 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | PRINTS | Myosin heavy chain signature | 279 | 304 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan01g4458 | 1213 | ProSiteProfiles | IQ motif profile. | 891 | 919 | - | - | |
| Tan01g4458 | 1213 | MobiDBLite | consensus disorder prediction | 955 | 976 | - | - | |
| Tan01g4458 | 1213 | Coils | Coil | 993 | 1041 | - | - | |
| Tan01g4458 | 1213 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 175 | 912 | IPR027417 | - | |
| Tan01g4458 | 1213 | MobiDBLite | consensus disorder prediction | 17 | 34 | - | - | |
| Tan01g4458 | 1213 | FunFam | Myosin heavy chain | 377 | 433 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4458 | Tan-Chr1:109916224 | Tan04g0424 | Tan-Chr4:3559476 | 0.00E+00 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g4458 | K10357 | - | csv:101210624 | 2061.96 |